| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358204
Identifier: 119358204
GI number: 119358204
Start: 2809413
End: 2810216
Strand: Reverse
Name: 119358204
Synonym: Cpha266_2436
Alternate gene names: NA
Gene position: 2810216-2809413 (Counterclockwise)
Preceding gene: 119358205
Following gene: 119358203
Centisome position: 89.67
GC content: 44.53
Gene sequence:
>804_bases ATGCCAGATGAATTTGAAATTGAAGCGCCGGCATTTGACGCCGCTAAAAATCCTGCATTGCGGGGTGTAACTACTGATAG AGGCTCAGGAGTTGTAGGAGTCAATCACAAAAAAAAGAGTTTCGGCCTGTTAGGAGGAAGTGATCGGGTTTTTCGCCAGA GTGCAGGAGTATATGGTGAGAGTGAGCAACAAGGAGTCTTTGGGCATTCTACTAATAATTCCGGAACAGGGGTATACGGC AACAGCGTAGGAACTGGTTTTGGTGTGCGTGGTGACAGCACTGATGGCATTGCTGTTCAAGGACAAAGCTTTGGAAATGG ACTTGCAGGAAAATTCATAGGTGACGTTGAGATTACAGAGAACTTGGTTGTCAAAGGAAGTAATGTTAATACCCTTATTT CACAGTTGCAGTCGATAGCAGGTCTTGCAGGGCGAGTCCAGGTTTTAGAGCAGGAAAATCAACGCTTGAAACAAGATGTT GAGCGGCTAAAGCAAGCTTCGTCTGGAGGCTCACAATCCGGAGGTTCTTCAACGAGGCAAATTTCAGTTCAAAAGAAAGA CGGTGAATTTATTGTTACCGGTTCCGGATTTCCGCCAAGAGTGCGCGTTACCATTCGGGTTGTAGCAGACAATAATCCTC AGGATTCGCGTACTTTTTTCCAGTCTTCAGAATCAGACGGAAAACTGAATTTCAAGCAATCAATATCTTGTACTTCTGGT GTTTTACTCCATTTTTCTGCGACAGACGACACTCTTGTTTCAGGCCAGAATGTTTGGAGCAATACTTTTGACATCACATG TTAG
Upstream 100 bases:
>100_bases CTCGCTGCAGGCTCGACGCCCTTACCAGGCCAGCCTGAGCTCAAACGTCAGGACGTGAGCGTTATGTAATAGCAACTTTA TTTTTACAGGAGACAGGATT
Downstream 100 bases:
>100_bases CGTAATGCGACTAACATGGCAGGTAGCTATCTGGTGAATGCCTGGCAAGAAGCCCGTCTGGAGCATATGGAATACGGGGG CGTTGCACGAATATGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPDEFEIEAPAFDAAKNPALRGVTTDRGSGVVGVNHKKKSFGLLGGSDRVFRQSAGVYGESEQQGVFGHSTNNSGTGVYG NSVGTGFGVRGDSTDGIAVQGQSFGNGLAGKFIGDVEITENLVVKGSNVNTLISQLQSIAGLAGRVQVLEQENQRLKQDV ERLKQASSGGSQSGGSSTRQISVQKKDGEFIVTGSGFPPRVRVTIRVVADNNPQDSRTFFQSSESDGKLNFKQSISCTSG VLLHFSATDDTLVSGQNVWSNTFDITC
Sequences:
>Translated_267_residues MPDEFEIEAPAFDAAKNPALRGVTTDRGSGVVGVNHKKKSFGLLGGSDRVFRQSAGVYGESEQQGVFGHSTNNSGTGVYG NSVGTGFGVRGDSTDGIAVQGQSFGNGLAGKFIGDVEITENLVVKGSNVNTLISQLQSIAGLAGRVQVLEQENQRLKQDV ERLKQASSGGSQSGGSSTRQISVQKKDGEFIVTGSGFPPRVRVTIRVVADNNPQDSRTFFQSSESDGKLNFKQSISCTSG VLLHFSATDDTLVSGQNVWSNTFDITC >Mature_266_residues PDEFEIEAPAFDAAKNPALRGVTTDRGSGVVGVNHKKKSFGLLGGSDRVFRQSAGVYGESEQQGVFGHSTNNSGTGVYGN SVGTGFGVRGDSTDGIAVQGQSFGNGLAGKFIGDVEITENLVVKGSNVNTLISQLQSIAGLAGRVQVLEQENQRLKQDVE RLKQASSGGSQSGGSSTRQISVQKKDGEFIVTGSGFPPRVRVTIRVVADNNPQDSRTFFQSSESDGKLNFKQSISCTSGV LLHFSATDDTLVSGQNVWSNTFDITC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28132; Mature: 28001
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDEFEIEAPAFDAAKNPALRGVTTDRGSGVVGVNHKKKSFGLLGGSDRVFRQSAGVYGE CCCCEEEECCCCCCCCCCCEECEECCCCCEEEEECCCCCCCCEECCCCHHHHHHCCCCCC SEQQGVFGHSTNNSGTGVYGNSVGTGFGVRGDSTDGIAVQGQSFGNGLAGKFIGDVEITE CCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCEEECC NLVVKGSNVNTLISQLQSIAGLAGRVQVLEQENQRLKQDVERLKQASSGGSQSGGSSTRQ EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE ISVQKKDGEFIVTGSGFPPRVRVTIRVVADNNPQDSRTFFQSSESDGKLNFKQSISCTSG EEEEECCCCEEEECCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCCEEEHHHCCCCCCC VLLHFSATDDTLVSGQNVWSNTFDITC EEEEEECCCCEEECCCCCCCCEEEEEC >Mature Secondary Structure PDEFEIEAPAFDAAKNPALRGVTTDRGSGVVGVNHKKKSFGLLGGSDRVFRQSAGVYGE CCCEEEECCCCCCCCCCCEECEECCCCCEEEEECCCCCCCCEECCCCHHHHHHCCCCCC SEQQGVFGHSTNNSGTGVYGNSVGTGFGVRGDSTDGIAVQGQSFGNGLAGKFIGDVEITE CCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCEEECC NLVVKGSNVNTLISQLQSIAGLAGRVQVLEQENQRLKQDVERLKQASSGGSQSGGSSTRQ EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE ISVQKKDGEFIVTGSGFPPRVRVTIRVVADNNPQDSRTFFQSSESDGKLNFKQSISCTSG EEEEECCCCEEEECCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCCEEEHHHCCCCCCC VLLHFSATDDTLVSGQNVWSNTFDITC EEEEEECCCCEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA