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The map label for this gene is secY [H]

Identifier: 119358171

GI number: 119358171

Start: 2787740

End: 2789071

Strand: Reverse

Name: secY [H]

Synonym: Cpha266_2403

Alternate gene names: 119358171

Gene position: 2789071-2787740 (Counterclockwise)

Preceding gene: 119358172

Following gene: 119358170

Centisome position: 89.0

GC content: 46.7

Gene sequence:

>1332_bases
ATGAAGCTTACTGAAAGTATTAGGAACATCAATAAAATTCCTGAACTTCGCCAAAGGATTCTCTATACGCTTCTTTTGCT
GTTTATCTACAGGTTAGGATCCCATATTACCATTCCCGGGGTGGATATGGCTGCCGTAGCTGCAGCGACTCCATCCCACA
CAAACGATCTTTTCGGTCTGTTTGATCTTTTTGTCGGAGGAGCATTTGCCAGAGCGTCCATTTTTTCATTAGGCATTATG
CCCTATATCTCTGCTTCAATTATTATCCAGTTGCTTGGAGCTGTAACGCCTTATTTCCAGAAACTCCAGAAAGAGGGAGA
GGAGGGCCGGCAGCGAATCAATCAGATGACCAGATACGGTACAGTACTGATTGCTGCGCTTCAGTCATGGGGGGTAAGTG
TGAGCCTTGCGAGTCCGGCATCATTCGGAAGGGTAGTTGTCCCTGATACCGGTATACTTTTTACCATTACGGCAGTAATT
ATTCTGACGGCGAGCACTGTTTTTGTGATGTGGCTGGGGGAGAGAATAACCGAACGCGGAATAGGTAACGGTATATCCCT
TATTATCATGATCGGTATTCTTGCTCGTTTTCCGCAATCTCTTGTCTCCGAATTCCGTTCGGTATCGCTTGGAAGCAAGA
ACTGGATCATTGAGATTATTATTATTGCGATGATGGTTGCGATCGTCGCTTTTGTTGTACTGCTGACTGTTGGAACCCGT
CGTATACCGGTGCAGCATGCTAAAAGAGTAGTGGGTCGAAAAGTATACGGGGGAAGCACCCAGTACATCCCCATGCGGAT
AAACACCGCCGGCGTGATGCCGATTATATTCGCTCAGTCCATCATGTTTCTTCCGGGAACATTTCTCTCTTTTTTTCCTG
AAAACGAGGTTATGCAGAGCGTCGCAGGAATTCTTGCCTACGATTCCTGGTGGTATGCCCTGATGTTCGGTACCATGATT
GTCTTTTTTACATATTTTTATACTGCAATAGCCTTCAATCCGAAAGAGGTCGCCGATACCATGAGACGTCAGGGCGGTTT
TATTCCGGGTGTAAGGCCAGGTAAAAGTACCGCTGATTTCATTGACAATATTCTTACTCGCATCACCCTTCCAGGTGCCG
TATCGCTTGCAATTATTGCCGTACTGCCGACATTTCTTACCAAATTCGCTAACGTCACCCCTGGTTTTGCGCAGTTTTTT
GGCGGAACAAGCCTTCTTATTATCGTCGGTGTCGGGCTTGATACCCTGCAGCAGGTTGAAAGTCACCTTCTGATGCGACA
CTACGACGGCTTTATGAAGACTGGAAAAACACGCGGCCGTCAACGGCCTTAA

Upstream 100 bases:

>100_bases
CAGGGATCTGTCGGTTGAGGAGGCTCTTTTAAAGCCAAAAGCAAAACTCGTCAAAAGAGTTAAAAAATCCGCGAAGCCCT
GAACACCTTAAGAAAACACC

Downstream 100 bases:

>100_bases
GGAACTGCTGCAATGATTACCATAAAAAGCGAACGGGAAATTGACTTGATGAGAGAGTCGGGAATGCTCGTTGCCCTGAC
TCTTGACATGCTTGAACAGG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKLTESIRNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDMAAVAAATPSHTNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIIQLLGAVTPYFQKLQKEGEEGRQRINQMTRYGTVLIAALQSWGVSVSLASPASFGRVVVPDTGILFTITAVI
ILTASTVFVMWLGERITERGIGNGISLIIMIGILARFPQSLVSEFRSVSLGSKNWIIEIIIIAMMVAIVAFVVLLTVGTR
RIPVQHAKRVVGRKVYGGSTQYIPMRINTAGVMPIIFAQSIMFLPGTFLSFFPENEVMQSVAGILAYDSWWYALMFGTMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADFIDNILTRITLPGAVSLAIIAVLPTFLTKFANVTPGFAQFF
GGTSLLIIVGVGLDTLQQVESHLLMRHYDGFMKTGKTRGRQRP

Sequences:

>Translated_443_residues
MKLTESIRNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDMAAVAAATPSHTNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIIQLLGAVTPYFQKLQKEGEEGRQRINQMTRYGTVLIAALQSWGVSVSLASPASFGRVVVPDTGILFTITAVI
ILTASTVFVMWLGERITERGIGNGISLIIMIGILARFPQSLVSEFRSVSLGSKNWIIEIIIIAMMVAIVAFVVLLTVGTR
RIPVQHAKRVVGRKVYGGSTQYIPMRINTAGVMPIIFAQSIMFLPGTFLSFFPENEVMQSVAGILAYDSWWYALMFGTMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADFIDNILTRITLPGAVSLAIIAVLPTFLTKFANVTPGFAQFF
GGTSLLIIVGVGLDTLQQVESHLLMRHYDGFMKTGKTRGRQRP
>Mature_443_residues
MKLTESIRNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDMAAVAAATPSHTNDLFGLFDLFVGGAFARASIFSLGIM
PYISASIIIQLLGAVTPYFQKLQKEGEEGRQRINQMTRYGTVLIAALQSWGVSVSLASPASFGRVVVPDTGILFTITAVI
ILTASTVFVMWLGERITERGIGNGISLIIMIGILARFPQSLVSEFRSVSLGSKNWIIEIIIIAMMVAIVAFVVLLTVGTR
RIPVQHAKRVVGRKVYGGSTQYIPMRINTAGVMPIIFAQSIMFLPGTFLSFFPENEVMQSVAGILAYDSWWYALMFGTMI
VFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADFIDNILTRITLPGAVSLAIIAVLPTFLTKFANVTPGFAQFF
GGTSLLIIVGVGLDTLQQVESHLLMRHYDGFMKTGKTRGRQRP

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=432, Percent_Identity=41.8981481481481, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48714; Mature: 48714

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTESIRNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDMAAVAAATPSHTNDLFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHH
FDLFVGGAFARASIFSLGIMPYISASIIIQLLGAVTPYFQKLQKEGEEGRQRINQMTRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TVLIAALQSWGVSVSLASPASFGRVVVPDTGILFTITAVIILTASTVFVMWLGERITERG
HHHHHHHHHCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGNGISLIIMIGILARFPQSLVSEFRSVSLGSKNWIIEIIIIAMMVAIVAFVVLLTVGTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RIPVQHAKRVVGRKVYGGSTQYIPMRINTAGVMPIIFAQSIMFLPGTFLSFFPENEVMQS
CCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHH
VAGILAYDSWWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IDNILTRITLPGAVSLAIIAVLPTFLTKFANVTPGFAQFFGGTSLLIIVGVGLDTLQQVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCHHHHHHHH
SHLLMRHYDGFMKTGKTRGRQRP
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLTESIRNINKIPELRQRILYTLLLLFIYRLGSHITIPGVDMAAVAAATPSHTNDLFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHH
FDLFVGGAFARASIFSLGIMPYISASIIIQLLGAVTPYFQKLQKEGEEGRQRINQMTRYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TVLIAALQSWGVSVSLASPASFGRVVVPDTGILFTITAVIILTASTVFVMWLGERITERG
HHHHHHHHHCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGNGISLIIMIGILARFPQSLVSEFRSVSLGSKNWIIEIIIIAMMVAIVAFVVLLTVGTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RIPVQHAKRVVGRKVYGGSTQYIPMRINTAGVMPIIFAQSIMFLPGTFLSFFPENEVMQS
CCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHH
VAGILAYDSWWYALMFGTMIVFFTYFYTAIAFNPKEVADTMRRQGGFIPGVRPGKSTADF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
IDNILTRITLPGAVSLAIIAVLPTFLTKFANVTPGFAQFFGGTSLLIIVGVGLDTLQQVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCHHHHHHHH
SHLLMRHYDGFMKTGKTRGRQRP
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA