| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yqgV [H]
Identifier: 119358157
GI number: 119358157
Start: 2777545
End: 2777859
Strand: Reverse
Name: yqgV [H]
Synonym: Cpha266_2389
Alternate gene names: 119358157
Gene position: 2777859-2777545 (Counterclockwise)
Preceding gene: 119358158
Following gene: 119358156
Centisome position: 88.64
GC content: 52.7
Gene sequence:
>315_bases ATGGCATTGATGGATATCACCGTTATTCCCCTTGACAACAGAGATGGCGGCTTGAGTGATTTCGTGGCAGGATTGCAGGA GCTGGTGGCCGCAAGCCAGTGCAGCTTCCTGCTGCATGATATGGGCACGACGATAGAAGGGCCGGCCCCAATGCTATTCG ACCTTGCCCTGAAGCTGCACGAGTATTCATTCGGCAAAGGAGGAGAGCGAGTCTATACGGTTATGAAAATCGACGACCGA AGAGACCGGACGGTTCATCTTGGAGAAAAAAGCGACTCGGTGAAAGCAAAAATAGCTCCGACAACGGGGGTGTGA
Upstream 100 bases:
>100_bases AACCTTTCTTGAAGAGGAGCTGCAGGTTCCGGTTACCTTTATTTCTGTAGGCCCCGGCCGTGACGAAACGGTATTCAGAT AACCTTCAGGTTTATTTGCT
Downstream 100 bases:
>100_bases AAGTAGGGGGATTGGCGAAAAAGTTTTATCTTCACTTTCTTTAAAGGGCATCGGTAAAAAATCGATACCAGGATTGTGAT TGTAACGCTTTCGCAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MALMDITVIPLDNRDGGLSDFVAGLQELVAASQCSFLLHDMGTTIEGPAPMLFDLALKLHEYSFGKGGERVYTVMKIDDR RDRTVHLGEKSDSVKAKIAPTTGV
Sequences:
>Translated_104_residues MALMDITVIPLDNRDGGLSDFVAGLQELVAASQCSFLLHDMGTTIEGPAPMLFDLALKLHEYSFGKGGERVYTVMKIDDR RDRTVHLGEKSDSVKAKIAPTTGV >Mature_103_residues ALMDITVIPLDNRDGGLSDFVAGLQELVAASQCSFLLHDMGTTIEGPAPMLFDLALKLHEYSFGKGGERVYTVMKIDDRR DRTVHLGEKSDSVKAKIAPTTGV
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0045 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319472, Length=99, Percent_Identity=34.3434343434343, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002767 - InterPro: IPR016198 [H]
Pfam domain/function: PF01910 DUF77 [H]
EC number: NA
Molecular weight: Translated: 11295; Mature: 11164
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALMDITVIPLDNRDGGLSDFVAGLQELVAASQCSFLLHDMGTTIEGPAPMLFDLALKLH CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH EYSFGKGGERVYTVMKIDDRRDRTVHLGEKSDSVKAKIAPTTGV HCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure ALMDITVIPLDNRDGGLSDFVAGLQELVAASQCSFLLHDMGTTIEGPAPMLFDLALKLH CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH EYSFGKGGERVYTVMKIDDRRDRTVHLGEKSDSVKAKIAPTTGV HCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]