| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119358148
Identifier: 119358148
GI number: 119358148
Start: 2766412
End: 2768262
Strand: Direct
Name: 119358148
Synonym: Cpha266_2380
Alternate gene names: NA
Gene position: 2766412-2768262 (Clockwise)
Preceding gene: 119358147
Following gene: 119358149
Centisome position: 88.27
GC content: 52.78
Gene sequence:
>1851_bases ATGGAAACCCGTAACGAAGAGACAATCCGCACGCTTGCTTATGAACTCTGGCTTAATCGCGGCGCTCCCTGTAATTATAC CCAGGATATCGACTGGCTGGAGAGCGAACGAATAATTTTATCCCGCTCTCTTGATCCCGTAATTGACCCGGTCGTGAGCG AACCGGTTGAAACGGACTCTTCCGCAGAGGTTCCCGCGCCTCCCGAAGTTACCGGTCCGGCACGGAGAACGAACAAGTGG ATGCAGGCGCACTGGGAGCAGATCGGCTTCAAGCCGCTCAAGCAGCTTTGCCTGCCAAGTACTCACGACTCCGGAACGTA TCGGCTGGATCTGAAACTCGCTCCTGATGCAGCGGATCTCATAAAGACGCTCTATAACTATGCCGATACCGAGAATAATG CGACCGGCGTCCGCAAATACATTCGGGGGATGGCCATCTGCCAGAGCCTCACTATCCGGGAACAGCTCGATATCGGTATT CGCGTTATCGATCTGCGCGTCTGCAAGGTGGACGGCGTGTACTATTGCTGCCATGCTCTCCTTGGTGACGAAATACGCGT ACTGCTGAAGGATATGGCCGAGTTTCTCGCCGCAAATCCCTATGAGGTTGTTTTCGTCAAGGTCGGCCTTAAGGAGATGA GTGTCGCGGAAGAAACAGAGGCATGGTCGTATCTGGTAAGCCACACTGATCCGTATGGCATAAAATACCCGAAGGAGAAG GTTGCTGGCGACGACAGCCCGCTCGATCCGGATTTTTCAATGGAAACGCTTGCTTCGTTGAAGGCAAATCATGACAGGCG GTGTCTTCTTTTATCGGATGACTATTTTACGAGCAATTACTCTGACGAGATTACAACCACGGATGGAGTTATCTCCAGAC TGGAAAGCAGGACAATGGAGATCGAAGGGGAAGAGCGGGCGAATCGCGAGGCGAAGAGAGAGAGCGGAAAACCGACGGCC ATAGATCGCAGACTTTTCGAAGCGCAATGTTTTCGGCCAACGAGCCAATTCAATTACGGAGCGGGATATATTCAGGCGGA AGGTGCGATTTCGCTTGGAGCGCTGGCTGGCCTTGCGGGACTATCATTAAATTACGTTCCGTTACTAAAGACGGTGTTCA AGGGCGATGAGCATACTCCTGTTCCGGCAAATCTTCATGAAAACGCGCAAAACTCAAGAAGTATCGTTAGGGAGTACTTT ACCTGGCTTGCCGGCAATCCCCATATAGCCCGTCCACAGGTTATCAACTGCGATTATTTTCAGGAGGTTCCGCTTGTCGA TATCGCCATACAGATCAGCATAGGTCAGCCCGTTCCCGATCTTTCGGGGGTTCAGGATATTCCGGTTCCTGAACTCAGGA TGGACTGGTTCACGGCGACGGTGGGATTGGTTCCCAATCTGGTGGCTTTTGCTGCAATGCTGGCGGGTGTGGGCTGCTGC GATCTTGGAAGGTACCTGGACGATAACATTCCCGGTATTACCGGAGATGTGCTCGGTGCCGCTCTGAAAGGAGCAGGATA TGCATGTGGCGAAGTTGCTCAAACCATTCATACCGTTCTGAAACTCACTGCCGACGAGCTGAACACGGTGCTTCGTCAGA TCGGTTATGCATCCGATGAAATTGAACAGGCATTCGTCAACATGGGAGAGGGATTTGTGGATTTCTTTTCCGATGCCGGA GAGGAGGCTGAACGAATCGCTATAGATGCTACCCGAATGGCGGAAGAGGCTGCCCGGATTGCTGCTGCGGAGACCGCAAG GGAGGCTGAACGCATAGCTCTCGAAACAGCTCGAATTGCCGAGGAAGCGGCAAGGGCAACCGCAAATGCCCTGAACCCGT CAAGGTGGTAA
Upstream 100 bases:
>100_bases GATTCGGTATTTTCAGCTTGCTTTACCTGTTAAATTCCGAAAAAAAGTTTTTATCATCGTCGTTTGCCTGAACAGATCAC CTATAAGGAGTTTTTTCACC
Downstream 100 bases:
>100_bases TGCAGAACTCATTATGTCGATCATTTCAAACAATAGTTGGATAGAGGGTTATCATATGAAAGATATACACGCATTTGTAA CACAGCTTAAAGATGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues METRNEETIRTLAYELWLNRGAPCNYTQDIDWLESERIILSRSLDPVIDPVVSEPVETDSSAEVPAPPEVTGPARRTNKW MQAHWEQIGFKPLKQLCLPSTHDSGTYRLDLKLAPDAADLIKTLYNYADTENNATGVRKYIRGMAICQSLTIREQLDIGI RVIDLRVCKVDGVYYCCHALLGDEIRVLLKDMAEFLAANPYEVVFVKVGLKEMSVAEETEAWSYLVSHTDPYGIKYPKEK VAGDDSPLDPDFSMETLASLKANHDRRCLLLSDDYFTSNYSDEITTTDGVISRLESRTMEIEGEERANREAKRESGKPTA IDRRLFEAQCFRPTSQFNYGAGYIQAEGAISLGALAGLAGLSLNYVPLLKTVFKGDEHTPVPANLHENAQNSRSIVREYF TWLAGNPHIARPQVINCDYFQEVPLVDIAIQISIGQPVPDLSGVQDIPVPELRMDWFTATVGLVPNLVAFAAMLAGVGCC DLGRYLDDNIPGITGDVLGAALKGAGYACGEVAQTIHTVLKLTADELNTVLRQIGYASDEIEQAFVNMGEGFVDFFSDAG EEAERIAIDATRMAEEAARIAAAETAREAERIALETARIAEEAARATANALNPSRW
Sequences:
>Translated_616_residues METRNEETIRTLAYELWLNRGAPCNYTQDIDWLESERIILSRSLDPVIDPVVSEPVETDSSAEVPAPPEVTGPARRTNKW MQAHWEQIGFKPLKQLCLPSTHDSGTYRLDLKLAPDAADLIKTLYNYADTENNATGVRKYIRGMAICQSLTIREQLDIGI RVIDLRVCKVDGVYYCCHALLGDEIRVLLKDMAEFLAANPYEVVFVKVGLKEMSVAEETEAWSYLVSHTDPYGIKYPKEK VAGDDSPLDPDFSMETLASLKANHDRRCLLLSDDYFTSNYSDEITTTDGVISRLESRTMEIEGEERANREAKRESGKPTA IDRRLFEAQCFRPTSQFNYGAGYIQAEGAISLGALAGLAGLSLNYVPLLKTVFKGDEHTPVPANLHENAQNSRSIVREYF TWLAGNPHIARPQVINCDYFQEVPLVDIAIQISIGQPVPDLSGVQDIPVPELRMDWFTATVGLVPNLVAFAAMLAGVGCC DLGRYLDDNIPGITGDVLGAALKGAGYACGEVAQTIHTVLKLTADELNTVLRQIGYASDEIEQAFVNMGEGFVDFFSDAG EEAERIAIDATRMAEEAARIAAAETAREAERIALETARIAEEAARATANALNPSRW >Mature_616_residues METRNEETIRTLAYELWLNRGAPCNYTQDIDWLESERIILSRSLDPVIDPVVSEPVETDSSAEVPAPPEVTGPARRTNKW MQAHWEQIGFKPLKQLCLPSTHDSGTYRLDLKLAPDAADLIKTLYNYADTENNATGVRKYIRGMAICQSLTIREQLDIGI RVIDLRVCKVDGVYYCCHALLGDEIRVLLKDMAEFLAANPYEVVFVKVGLKEMSVAEETEAWSYLVSHTDPYGIKYPKEK VAGDDSPLDPDFSMETLASLKANHDRRCLLLSDDYFTSNYSDEITTTDGVISRLESRTMEIEGEERANREAKRESGKPTA IDRRLFEAQCFRPTSQFNYGAGYIQAEGAISLGALAGLAGLSLNYVPLLKTVFKGDEHTPVPANLHENAQNSRSIVREYF TWLAGNPHIARPQVINCDYFQEVPLVDIAIQISIGQPVPDLSGVQDIPVPELRMDWFTATVGLVPNLVAFAAMLAGVGCC DLGRYLDDNIPGITGDVLGAALKGAGYACGEVAQTIHTVLKLTADELNTVLRQIGYASDEIEQAFVNMGEGFVDFFSDAG EEAERIAIDATRMAEEAARIAAAETAREAERIALETARIAEEAARATANALNPSRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI297515471, Length=133, Percent_Identity=33.0827067669173, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI23397570, Length=133, Percent_Identity=33.0827067669173, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68029; Mature: 68029
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRNEETIRTLAYELWLNRGAPCNYTQDIDWLESERIILSRSLDPVIDPVVSEPVETDS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCCHHHHHHHCCCCCCCC SAEVPAPPEVTGPARRTNKWMQAHWEQIGFKPLKQLCLPSTHDSGTYRLDLKLAPDAADL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEEEECCCHHHH IKTLYNYADTENNATGVRKYIRGMAICQSLTIREQLDIGIRVIDLRVCKVDGVYYCCHAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHH LGDEIRVLLKDMAEFLAANPYEVVFVKVGLKEMSVAEETEAWSYLVSHTDPYGIKYPKEK HHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH VAGDDSPLDPDFSMETLASLKANHDRRCLLLSDDYFTSNYSDEITTTDGVISRLESRTME HCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCEE IEGEERANREAKRESGKPTAIDRRLFEAQCFRPTSQFNYGAGYIQAEGAISLGALAGLAG CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHH LSLNYVPLLKTVFKGDEHTPVPANLHENAQNSRSIVREYFTWLAGNPHIARPQVINCDYF CCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHH QEVPLVDIAIQISIGQPVPDLSGVQDIPVPELRMDWFTATVGLVPNLVAFAAMLAGVGCC HCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DLGRYLDDNIPGITGDVLGAALKGAGYACGEVAQTIHTVLKLTADELNTVLRQIGYASDE HHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IEQAFVNMGEGFVDFFSDAGEEAERIAIDATRMAEEAARIAAAETAREAERIALETARIA HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAARATANALNPSRW HHHHHHHHHCCCCCCC >Mature Secondary Structure METRNEETIRTLAYELWLNRGAPCNYTQDIDWLESERIILSRSLDPVIDPVVSEPVETDS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCCHHHHHHHCCCCCCCC SAEVPAPPEVTGPARRTNKWMQAHWEQIGFKPLKQLCLPSTHDSGTYRLDLKLAPDAADL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEEEEECCCHHHH IKTLYNYADTENNATGVRKYIRGMAICQSLTIREQLDIGIRVIDLRVCKVDGVYYCCHAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHH LGDEIRVLLKDMAEFLAANPYEVVFVKVGLKEMSVAEETEAWSYLVSHTDPYGIKYPKEK HHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH VAGDDSPLDPDFSMETLASLKANHDRRCLLLSDDYFTSNYSDEITTTDGVISRLESRTME HCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCEE IEGEERANREAKRESGKPTAIDRRLFEAQCFRPTSQFNYGAGYIQAEGAISLGALAGLAG CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHH LSLNYVPLLKTVFKGDEHTPVPANLHENAQNSRSIVREYFTWLAGNPHIARPQVINCDYF CCCCHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHH QEVPLVDIAIQISIGQPVPDLSGVQDIPVPELRMDWFTATVGLVPNLVAFAAMLAGVGCC HCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DLGRYLDDNIPGITGDVLGAALKGAGYACGEVAQTIHTVLKLTADELNTVLRQIGYASDE HHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IEQAFVNMGEGFVDFFSDAGEEAERIAIDATRMAEEAARIAAAETAREAERIALETARIA HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEAARATANALNPSRW HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA