The gene/protein map for NC_004088 is currently unavailable.
Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is gmhB [H]

Identifier: 119358144

GI number: 119358144

Start: 2762086

End: 2762670

Strand: Reverse

Name: gmhB [H]

Synonym: Cpha266_2376

Alternate gene names: 119358144

Gene position: 2762670-2762086 (Counterclockwise)

Preceding gene: 119358145

Following gene: 119358143

Centisome position: 88.15

GC content: 51.11

Gene sequence:

>585_bases
ATGCCGAATTACATAAAGGTGCTTTTTCTCGACAGGGACGGTACGATAAACGAAGATACAGGTTCGTATGTTGCAACGCG
TGAGCAGTTCCGGCTCATTGAGAGAGCAGGGGAGGCTATCGCGCTTGCAAGGGAAGCAGGCTTCAGAATTGTTGTGGTGA
CCAATCAGGCCGGCATTGCCCGCGGCATAGCCACCGTCGGGCAGGTTGAGGATATTCATCTCTACCTGAGCGAGCTGCTC
ACCCTGTACAAAACCAGCATTGACGGATGTTATTACTGCCCGTCTCATCCCGATTTTCCCCATCCCGACGACGACCGGTA
CATACAGTGTCGCAAGCCGGAAACAGGGATGGTTGATCGAGCCGTTGCGGATTTTCTTGCTGATGGTTTTATTGTCGATC
GAAGCAGTTCGTTTTTTATTGGCGACAAGGTTCTGGATGTTGAGTGTGGCTTGCGTGCCGGCTTGCGAACGGTGCTGGTG
AGAACCGGCCACAATGAGGAAAAACTGTGCCTTGAGCAACAGATCATTCCGGACTTCATAGCTGATGATCTTTATCAAGC
CATTACCGGGTATATTCTTTCGTGA

Upstream 100 bases:

>100_bases
GCAGCTTGTTCATGAAGCCATGTCGAAGGATTTTGCCTGGAAAAGCTCGGCAGAGGAGTATGACCAGTTATATCGTCAAC
TTCTTGAGCCGTAAACAGGT

Downstream 100 bases:

>100_bases
ACCGCCCGCCTCTTGGTGAGGCGGATCTCTTATTCCATGCTGAGCCTATACGTTCACATTCCTTTCTGCCGTACCCGCTG
CTCTTATTGCGATTTTTATC

Product: histidinol-phosphate phosphatase family protein

Products: NA

Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIARGIATVGQVEDIHLYLSELL
TLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDRAVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLV
RTGHNEEKLCLEQQIIPDFIADDLYQAITGYILS

Sequences:

>Translated_194_residues
MPNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIARGIATVGQVEDIHLYLSELL
TLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDRAVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLV
RTGHNEEKLCLEQQIIPDFIADDLYQAITGYILS
>Mature_193_residues
PNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIARGIATVGQVEDIHLYLSELLT
LYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDRAVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLVR
TGHNEEKLCLEQQIIPDFIADDLYQAITGYILS

Specific function: Converts the D-glycero-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-D-manno-heptose 1-phosphate by removing the phosphate group at the C-7 position [H]

COG id: COG0241

COG function: function code E; Histidinol phosphatase and related phosphatases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gmhB family [H]

Homologues:

Organism=Escherichia coli, GI1786399, Length=192, Percent_Identity=37.5, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006549
- InterPro:   IPR006543
- InterPro:   IPR013954 [H]

Pfam domain/function: PF08645 PNK3P [H]

EC number: NA

Molecular weight: Translated: 21699; Mature: 21568

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIA
CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEHHCCCEEEEEEECCCCHH
RGIATVGQVEDIHLYLSELLTLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDR
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHH
AVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLVRTGHNEEKLCLEQQIIPDFI
HHHHHHHCCEEEECCCCEEECCEEEEECCCCHHCHHEEEEECCCCHHHHHHHHHHHHHHH
ADDLYQAITGYILS
HHHHHHHHHHHHCC
>Mature Secondary Structure 
PNYIKVLFLDRDGTINEDTGSYVATREQFRLIERAGEAIALAREAGFRIVVVTNQAGIA
CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEHHCCCEEEEEEECCCCHH
RGIATVGQVEDIHLYLSELLTLYKTSIDGCYYCPSHPDFPHPDDDRYIQCRKPETGMVDR
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHH
AVADFLADGFIVDRSSSFFIGDKVLDVECGLRAGLRTVLVRTGHNEEKLCLEQQIIPDFI
HHHHHHHCCEEEECCCCEEECCEEEEECCCCHHCHHEEEEECCCCHHHHHHHHHHHHHHH
ADDLYQAITGYILS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]