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The map label for this gene is ctrB [H]

Identifier: 119358114

GI number: 119358114

Start: 2721566

End: 2722765

Strand: Reverse

Name: ctrB [H]

Synonym: Cpha266_2346

Alternate gene names: 119358114

Gene position: 2722765-2721566 (Counterclockwise)

Preceding gene: 119358115

Following gene: 119358113

Centisome position: 86.88

GC content: 50.25

Gene sequence:

>1200_bases
ATGGACAGGGCTTTTTTTTATCAGCAGTACAAACCATCAATGAGTTCATCGTCACTATTTTTTAAAAACGCAAAGATACG
GCTTGAGCAGATCAGGACGCACGCCATATTGCGCAACAAACTCTTTCTTCTGACCGTTGTTCTCCCCACTGTTCTTTCCA
TACTTTATTTCGGGATCATAAAAAGCGATGTTTACGTATCCGAATCCCGTTTTGTTGTAAGAAGTCCCGAGCGACCGGTA
CAGACCGGTCTTGGTGCCATCATACAGGGCGCAGGATTTGCCAGGGCTCTCGACGATACCTATAGCGTGCACGATTACAT
GCTTTCGCGCGATGCGCTGTATTCGGTCAATCGCAGCTTCGACCTTCGCCAGGCATTCAGCAGAAAAGAGGCCGATCTGT
TCAGCCGATTCAACCCTCTTGGCATCGACAACAGTTTTGAAGCCCTGTTTCTTTACTATCAGCATCGGGTTGAAATCAAT
CTGAACGTCTCATCATCGATCTCGACATTGAGAACCAGAGCGTTTACGGCAACTGATTCCAGGGAACTCAACGAACTGCT
GTTGCGGCGGGCAGAAGAGCTCATCAACAAACTTAACGAGCGCGGTCGCAATGATCTTATTCGCTATGCGCAGCAGGAAG
TTAATGTGGCGCAACAGCAATTGAGGAAAACCGCTCTTGCGCTCTCATTGTTCAGGAACAAAAACGGTGTCTTCGACCCT
GTAGGGCAGTCGGCGTTGCAACTGCAACAGGTAGCCAAACTGCAGGATGAATTGATTGCCACGAAAACCCAGCTTGCGCA
GGTTACCGCGTTTACCCCCGAGAGCCCGCAGATTCCCGTACTGCAGCAGCGTGTCAGCGCAATACAGTCTGAAATCGACA
CGGAAACCGCAAAAATTACCGGTAAATCAACCGGCTCCGATCCCTCTCTTACCAGCAAAGCTGTCGAATACGAACGACTC
TCGCTCGACAGATCGTTTGCGGAAAAACAGCTTGCAGCAGCCATGGCTTCGCTTGAACAGGCACGTAACGAAGCACAGCG
CAAGCAACTCTACCTCGAACGGATCGTGCAGCCGAACAAGCCCGACATTGCCATCGAACCGCAGCGCATCAGAGCTATTT
TGACCACGCTTGCAGTAGGCGTGGTTGTTTGGGGAATTCTCTCCATGCTTTTTGCCGGTATTCGCGAACATCACGATTGA

Upstream 100 bases:

>100_bases
TCATCTGATCTCCAGAAATTTCTGAATATGGTCGTTTCCGTGGTTTATCCTATTGTCAATATTTCAAATGCGGTGCAGTA
ATTAATTGCCCGGCAAAAGA

Downstream 100 bases:

>100_bases
GCGTTCATGAAAGAGCTTTTACAATCGCTTGCGTTACAGAAGAGAGTGATCGGCGCGCTGCTGATGCGCGAAACCATTAC
CCGGTACGGCAGGAATAACA

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDRAFFYQQYKPSMSSSSLFFKNAKIRLEQIRTHAILRNKLFLLTVVLPTVLSILYFGIIKSDVYVSESRFVVRSPERPV
QTGLGAIIQGAGFARALDDTYSVHDYMLSRDALYSVNRSFDLRQAFSRKEADLFSRFNPLGIDNSFEALFLYYQHRVEIN
LNVSSSISTLRTRAFTATDSRELNELLLRRAEELINKLNERGRNDLIRYAQQEVNVAQQQLRKTALALSLFRNKNGVFDP
VGQSALQLQQVAKLQDELIATKTQLAQVTAFTPESPQIPVLQQRVSAIQSEIDTETAKITGKSTGSDPSLTSKAVEYERL
SLDRSFAEKQLAAAMASLEQARNEAQRKQLYLERIVQPNKPDIAIEPQRIRAILTTLAVGVVVWGILSMLFAGIREHHD

Sequences:

>Translated_399_residues
MDRAFFYQQYKPSMSSSSLFFKNAKIRLEQIRTHAILRNKLFLLTVVLPTVLSILYFGIIKSDVYVSESRFVVRSPERPV
QTGLGAIIQGAGFARALDDTYSVHDYMLSRDALYSVNRSFDLRQAFSRKEADLFSRFNPLGIDNSFEALFLYYQHRVEIN
LNVSSSISTLRTRAFTATDSRELNELLLRRAEELINKLNERGRNDLIRYAQQEVNVAQQQLRKTALALSLFRNKNGVFDP
VGQSALQLQQVAKLQDELIATKTQLAQVTAFTPESPQIPVLQQRVSAIQSEIDTETAKITGKSTGSDPSLTSKAVEYERL
SLDRSFAEKQLAAAMASLEQARNEAQRKQLYLERIVQPNKPDIAIEPQRIRAILTTLAVGVVVWGILSMLFAGIREHHD
>Mature_399_residues
MDRAFFYQQYKPSMSSSSLFFKNAKIRLEQIRTHAILRNKLFLLTVVLPTVLSILYFGIIKSDVYVSESRFVVRSPERPV
QTGLGAIIQGAGFARALDDTYSVHDYMLSRDALYSVNRSFDLRQAFSRKEADLFSRFNPLGIDNSFEALFLYYQHRVEIN
LNVSSSISTLRTRAFTATDSRELNELLLRRAEELINKLNERGRNDLIRYAQQEVNVAQQQLRKTALALSLFRNKNGVFDP
VGQSALQLQQVAKLQDELIATKTQLAQVTAFTPESPQIPVLQQRVSAIQSEIDTETAKITGKSTGSDPSLTSKAVEYERL
SLDRSFAEKQLAAAMASLEQARNEAQRKQLYLERIVQPNKPDIAIEPQRIRAILTTLAVGVVVWGILSMLFAGIREHHD

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705
- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 45193; Mature: 45193

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRAFFYQQYKPSMSSSSLFFKNAKIRLEQIRTHAILRNKLFLLTVVLPTVLSILYFGII
CCCCHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSDVYVSESRFVVRSPERPVQTGLGAIIQGAGFARALDDTYSVHDYMLSRDALYSVNRSF
HHCEEECCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLRQAFSRKEADLFSRFNPLGIDNSFEALFLYYQHRVEINLNVSSSISTLRTRAFTATDS
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCH
RELNELLLRRAEELINKLNERGRNDLIRYAQQEVNVAQQQLRKTALALSLFRNKNGVFDP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VGQSALQLQQVAKLQDELIATKTQLAQVTAFTPESPQIPVLQQRVSAIQSEIDTETAKIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCHHHEEE
GKSTGSDPSLTSKAVEYERLSLDRSFAEKQLAAAMASLEQARNEAQRKQLYLERIVQPNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDIAIEPQRIRAILTTLAVGVVVWGILSMLFAGIREHHD
CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRAFFYQQYKPSMSSSSLFFKNAKIRLEQIRTHAILRNKLFLLTVVLPTVLSILYFGII
CCCCHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSDVYVSESRFVVRSPERPVQTGLGAIIQGAGFARALDDTYSVHDYMLSRDALYSVNRSF
HHCEEECCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLRQAFSRKEADLFSRFNPLGIDNSFEALFLYYQHRVEINLNVSSSISTLRTRAFTATDS
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEEECCCHHHHHHHHHHHCCCCH
RELNELLLRRAEELINKLNERGRNDLIRYAQQEVNVAQQQLRKTALALSLFRNKNGVFDP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VGQSALQLQQVAKLQDELIATKTQLAQVTAFTPESPQIPVLQQRVSAIQSEIDTETAKIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCHHHEEE
GKSTGSDPSLTSKAVEYERLSLDRSFAEKQLAAAMASLEQARNEAQRKQLYLERIVQPNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDIAIEPQRIRAILTTLAVGVVVWGILSMLFAGIREHHD
CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]