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The map label for this gene is ctrC [H]

Identifier: 119358113

GI number: 119358113

Start: 2720777

End: 2721559

Strand: Reverse

Name: ctrC [H]

Synonym: Cpha266_2345

Alternate gene names: 119358113

Gene position: 2721559-2720777 (Counterclockwise)

Preceding gene: 119358114

Following gene: 119358112

Centisome position: 86.84

GC content: 48.28

Gene sequence:

>783_bases
ATGAAAGAGCTTTTACAATCGCTTGCGTTACAGAAGAGAGTGATCGGCGCGCTGCTGATGCGCGAAACCATTACCCGGTA
CGGCAGGAATAACATCGGCTTTCTCTGGCTTTTTATCGAACCGGCACTTTTTACTGTCATGATTACGATCGTCTGGCACT
TCACGAGAGCAGGACGTGTTACCGGCATTCCCATTACAGCTATGGCCGTCACCGGATATGCCTCGATACAGCTCTGGCGA
AATATTGTCAACAGGGCCAAAAACGCTGTGTCGGCAAATAATGCGATCATGTACCATAGAAACATCCATGTGCTCGATGT
TTTTATATCGCGCATTGTGCTTGAAATGTTCGGCTCCATAACCTCATTCATTGCGCTCAGTATCATATTCATCAATATCG
GATGGATGGATCTTCCTCAAGATCCACTCAAGATTATACTTGCCTTGTTGCTTTTATCATGGTTCGGCGCTTCGCTTGCC
CTTATTATCGGTTCGCTCAACACACGTTTTGAAGTAACCGACAGGATATGGAAACCGCTGTCGTATGGCCTGTTTCTTCT
TTCCGGCCTGTTCTTTATTGTGGACTGGCTCTCCCCTGATGCTCAGCGTATTGTTCTTCTTTTTCCGATGGCGCATGGTC
TCGAATTGTTGCGAGACGGGTATTTCGGCAGTATGTTTACCGCACATTACGATATGGCATACATGGCTCTCTGCTGTCTG
GGTCTTACGCTGTCCGGGCTGTTTCTTGTCGATGGCCTGAGCCGGAGGGTCGAGCCCGAATGA

Upstream 100 bases:

>100_bases
CATCAGAGCTATTTTGACCACGCTTGCAGTAGGCGTGGTTGTTTGGGGAATTCTCTCCATGCTTTTTGCCGGTATTCGCG
AACATCACGATTGAGCGTTC

Downstream 100 bases:

>100_bases
TCGTTGTCAATAATATTGTCAAACGTTATAAAACAAGGACCGGCTACAACACCGTACTCGATGGCATTTCGTTTTCCGTT
GAGAAAGGCGAGAAAATAGG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKELLQSLALQKRVIGALLMRETITRYGRNNIGFLWLFIEPALFTVMITIVWHFTRAGRVTGIPITAMAVTGYASIQLWR
NIVNRAKNAVSANNAIMYHRNIHVLDVFISRIVLEMFGSITSFIALSIIFINIGWMDLPQDPLKIILALLLLSWFGASLA
LIIGSLNTRFEVTDRIWKPLSYGLFLLSGLFFIVDWLSPDAQRIVLLFPMAHGLELLRDGYFGSMFTAHYDMAYMALCCL
GLTLSGLFLVDGLSRRVEPE

Sequences:

>Translated_260_residues
MKELLQSLALQKRVIGALLMRETITRYGRNNIGFLWLFIEPALFTVMITIVWHFTRAGRVTGIPITAMAVTGYASIQLWR
NIVNRAKNAVSANNAIMYHRNIHVLDVFISRIVLEMFGSITSFIALSIIFINIGWMDLPQDPLKIILALLLLSWFGASLA
LIIGSLNTRFEVTDRIWKPLSYGLFLLSGLFFIVDWLSPDAQRIVLLFPMAHGLELLRDGYFGSMFTAHYDMAYMALCCL
GLTLSGLFLVDGLSRRVEPE
>Mature_260_residues
MKELLQSLALQKRVIGALLMRETITRYGRNNIGFLWLFIEPALFTVMITIVWHFTRAGRVTGIPITAMAVTGYASIQLWR
NIVNRAKNAVSANNAIMYHRNIHVLDVFISRIVLEMFGSITSFIALSIIFINIGWMDLPQDPLKIILALLLLSWFGASLA
LIIGSLNTRFEVTDRIWKPLSYGLFLLSGLFFIVDWLSPDAQRIVLLFPMAHGLELLRDGYFGSMFTAHYDMAYMALCCL
GLTLSGLFLVDGLSRRVEPE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29407; Mature: 29407

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELLQSLALQKRVIGALLMRETITRYGRNNIGFLWLFIEPALFTVMITIVWHFTRAGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCC
TGIPITAMAVTGYASIQLWRNIVNRAKNAVSANNAIMYHRNIHVLDVFISRIVLEMFGSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
TSFIALSIIFINIGWMDLPQDPLKIILALLLLSWFGASLALIIGSLNTRFEVTDRIWKPL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SYGLFLLSGLFFIVDWLSPDAQRIVLLFPMAHGLELLRDGYFGSMFTAHYDMAYMALCCL
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GLTLSGLFLVDGLSRRVEPE
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKELLQSLALQKRVIGALLMRETITRYGRNNIGFLWLFIEPALFTVMITIVWHFTRAGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCC
TGIPITAMAVTGYASIQLWRNIVNRAKNAVSANNAIMYHRNIHVLDVFISRIVLEMFGSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
TSFIALSIIFINIGWMDLPQDPLKIILALLLLSWFGASLALIIGSLNTRFEVTDRIWKPL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
SYGLFLLSGLFFIVDWLSPDAQRIVLLFPMAHGLELLRDGYFGSMFTAHYDMAYMALCCL
HHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GLTLSGLFLVDGLSRRVEPE
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]