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The map label for this gene is bexA [H]

Identifier: 119358112

GI number: 119358112

Start: 2720127

End: 2720780

Strand: Reverse

Name: bexA [H]

Synonym: Cpha266_2344

Alternate gene names: 119358112

Gene position: 2720780-2720127 (Counterclockwise)

Preceding gene: 119358113

Following gene: 119358111

Centisome position: 86.82

GC content: 46.64

Gene sequence:

>654_bases
ATGATCGTTGTCAATAATATTGTCAAACGTTATAAAACAAGGACCGGCTACAACACCGTACTCGATGGCATTTCGTTTTC
CGTTGAGAAAGGCGAGAAAATAGGAATACTTGGCAGAAACGGAGCAGGGAAGTCAACGTTGATCCGTCTTCTGGGCGGTA
TCGAACATCCGGATTCCGGAACGATCGAACGCCGCATGAACGTTTCCTGGCCTCTGGCTGCAAAAGGCGGATTTCAGGGA
TCGTTGACAGGCGCAGACAACCTTCGCTTCATTTGCCGGATTTATGGTGTCGATTATGCTGATAAAATGAAGTTTGTCGA
AGAGTTTGCAGAGCTTGGCCAATATATGCACGAGCCATTGAAAACATACTCGGCCGGCATGCGGGGTCGTTTGGCATTCG
CTCTTTCCATGGCCATAGAATTCGACTGTTATCTTATCGACGAAGCCATGTCAGCCGGAGATGCCCGCTTCCGTGATAAA
TGTCGTTATGAACTGCTTGAAAAACGGGGTGACCGGTCGATCATTCTTGTATCGCACGAACCAAAACAGATGCGTCAATT
CTGCACGGTCTTTTATGTGCTTCTGGACGGCAAGATAATTCGTTTCGACGACGGTGATAAAGCATACGGGTTTTATAAAA
AAAATTTCAACTGA

Upstream 100 bases:

>100_bases
CCGCACATTACGATATGGCATACATGGCTCTCTGCTGTCTGGGTCTTACGCTGTCCGGGCTGTTTCTTGTCGATGGCCTG
AGCCGGAGGGTCGAGCCCGA

Downstream 100 bases:

>100_bases
ACGGCCTTCTATTGAAATTCAGTAAACCAGAGATGTTCTGAAGTATGTATGTTCGATAGCGATATGCGAGAGCTCTATTA
TAAAGACAATCCTTTCCTTT

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIVVNNIVKRYKTRTGYNTVLDGISFSVEKGEKIGILGRNGAGKSTLIRLLGGIEHPDSGTIERRMNVSWPLAAKGGFQG
SLTGADNLRFICRIYGVDYADKMKFVEEFAELGQYMHEPLKTYSAGMRGRLAFALSMAIEFDCYLIDEAMSAGDARFRDK
CRYELLEKRGDRSIILVSHEPKQMRQFCTVFYVLLDGKIIRFDDGDKAYGFYKKNFN

Sequences:

>Translated_217_residues
MIVVNNIVKRYKTRTGYNTVLDGISFSVEKGEKIGILGRNGAGKSTLIRLLGGIEHPDSGTIERRMNVSWPLAAKGGFQG
SLTGADNLRFICRIYGVDYADKMKFVEEFAELGQYMHEPLKTYSAGMRGRLAFALSMAIEFDCYLIDEAMSAGDARFRDK
CRYELLEKRGDRSIILVSHEPKQMRQFCTVFYVLLDGKIIRFDDGDKAYGFYKKNFN
>Mature_217_residues
MIVVNNIVKRYKTRTGYNTVLDGISFSVEKGEKIGILGRNGAGKSTLIRLLGGIEHPDSGTIERRMNVSWPLAAKGGFQG
SLTGADNLRFICRIYGVDYADKMKFVEEFAELGQYMHEPLKTYSAGMRGRLAFALSMAIEFDCYLIDEAMSAGDARFRDK
CRYELLEKRGDRSIILVSHEPKQMRQFCTVFYVLLDGKIIRFDDGDKAYGFYKKNFN

Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=216, Percent_Identity=26.3888888888889, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI47078218, Length=216, Percent_Identity=26.3888888888889, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI27436953, Length=197, Percent_Identity=26.3959390862944, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=25.8928571428571, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=25.8928571428571, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI153792144, Length=196, Percent_Identity=24.4897959183673, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI31657092, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI27477115, Length=199, Percent_Identity=24.6231155778894, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1789751, Length=204, Percent_Identity=28.921568627451, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789032, Length=216, Percent_Identity=25.462962962963, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=225, Percent_Identity=24, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI2367384, Length=222, Percent_Identity=30.1801801801802, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787712, Length=204, Percent_Identity=25.9803921568627, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081782, Length=166, Percent_Identity=29.5180722891566, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=213, Percent_Identity=27.6995305164319, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221500365, Length=189, Percent_Identity=30.6878306878307, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI116007184, Length=189, Percent_Identity=30.6878306878307, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24643674, Length=209, Percent_Identity=23.9234449760766, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24608; Mature: 24608

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVNNIVKRYKTRTGYNTVLDGISFSVEKGEKIGILGRNGAGKSTLIRLLGGIEHPDSG
CEEHHHHHHHHHCCCCHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCC
TIERRMNVSWPLAAKGGFQGSLTGADNLRFICRIYGVDYADKMKFVEEFAELGQYMHEPL
CCEEECCCCCCEEECCCCCCCCCCCCCCEEEEHEECCCHHHHHHHHHHHHHHHHHHHHHH
KTYSAGMRGRLAFALSMAIEFDCYLIDEAMSAGDARFRDKCRYELLEKRGDRSIILVSHE
HHHHCCCCHHHHHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
PKQMRQFCTVFYVLLDGKIIRFDDGDKAYGFYKKNFN
HHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure
MIVVNNIVKRYKTRTGYNTVLDGISFSVEKGEKIGILGRNGAGKSTLIRLLGGIEHPDSG
CEEHHHHHHHHHCCCCHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCC
TIERRMNVSWPLAAKGGFQGSLTGADNLRFICRIYGVDYADKMKFVEEFAELGQYMHEPL
CCEEECCCCCCEEECCCCCCCCCCCCCCEEEEHEECCCHHHHHHHHHHHHHHHHHHHHHH
KTYSAGMRGRLAFALSMAIEFDCYLIDEAMSAGDARFRDKCRYELLEKRGDRSIILVSHE
HHHHCCCCHHHHHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECC
PKQMRQFCTVFYVLLDGKIIRFDDGDKAYGFYKKNFN
HHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3284653; 2082145 [H]