| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is nadC [H]
Identifier: 119358065
GI number: 119358065
Start: 2625277
End: 2626152
Strand: Reverse
Name: nadC [H]
Synonym: Cpha266_2293
Alternate gene names: 119358065
Gene position: 2626152-2625277 (Counterclockwise)
Preceding gene: 119358069
Following gene: 119358062
Centisome position: 83.8
GC content: 47.95
Gene sequence:
>876_bases ATGAATAAGGCTCAACAGGATTTTTATGAGGGGTGCCGATCGCGGGCAGTGATGCTTGCTCTTGAGGAGGATCGTTATAT CGGCGATATTACAACTCTTTCGACTATAGACGACAACAGGGTTGGACGTGCAGAGGTGCGGGCAAAGGAGGATGGCATTC TTGCTGGCGCAGAGGTTGCACGACAGGTTTTCGCAGCCTGCGATGGTGCGGTTTCGGTTGTTTGTCACCATTCTGACGGC GATCAACTTATGGTTGGCGATCTTGTGCTTGAAGTTTCAGGAAAACTTGCACCGCTGCTTGTCGGTGAACGAACGGCGCT TAATTTTATGCAGCGGATGTCGGGCATTGCAACCAAAACAAAACTTTTTGTCGAAAAGGTAAGTCATACGAAGGCCTCTA TTCTCGATACCAGAAAGACTGCTCCCGGTTTGCGATATTTTGATAAGGAAGCGGTCAGGATCGGAGGAGGACGGAATCAT CGTTTTGGACTGTTTGATATGATGCTTATCAAAGATAATCATATTGACGCATCCGGAGGGGTTGCCAATGCTCTGCGCAA GGCCAGGCAATATCGAAAGAAACATGGGCTTGCCGTCAAAATCGAAACGGAAGTCCGTTCGATTGATGAACTTCGCGAGG CTCTGTCCTGCAAGCCCGATATTGTGCTTCTTGATAACTTTGGTATTGATCTGCTCTCTGATGCGGTAGCTTTTTCGAAA GAAAATTATCCCATGGTGATACTTGAGGCTTCAGGAAATGTCGGACTGCACAATGTGGCGCAGATTGCGGAAACAGGAGT TGATTATATATCCATCGGCGAACTGACACACAGTGTCAAGGCGCTTGATCTCTCGATGACCATCAGCCTTGATTGA
Upstream 100 bases:
>100_bases GGGCGAGAGGCTTTCCGGTTCAATTAAGGAAAAAATAGTACTTTGTGAAAAAGCCGGTTACATCTTTTTGATAAACTAAT TATTGCACTGGATTGCTGTT
Downstream 100 bases:
>100_bases ATTGATGGATGGAGATCGGAGCCGATTACCGATGATCATGAGAGGATATAAAAAAACACCGCAGGATTTCTTTGCTCTCC TGCGGTGTTTTTTTGTTCTC
Product: nicotinate-nucleotide pyrophosphorylase
Products: NA
Alternate protein names: General stress protein 70; GSP70; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNKAQQDFYEGCRSRAVMLALEEDRYIGDITTLSTIDDNRVGRAEVRAKEDGILAGAEVARQVFAACDGAVSVVCHHSDG DQLMVGDLVLEVSGKLAPLLVGERTALNFMQRMSGIATKTKLFVEKVSHTKASILDTRKTAPGLRYFDKEAVRIGGGRNH RFGLFDMMLIKDNHIDASGGVANALRKARQYRKKHGLAVKIETEVRSIDELREALSCKPDIVLLDNFGIDLLSDAVAFSK ENYPMVILEASGNVGLHNVAQIAETGVDYISIGELTHSVKALDLSMTISLD
Sequences:
>Translated_291_residues MNKAQQDFYEGCRSRAVMLALEEDRYIGDITTLSTIDDNRVGRAEVRAKEDGILAGAEVARQVFAACDGAVSVVCHHSDG DQLMVGDLVLEVSGKLAPLLVGERTALNFMQRMSGIATKTKLFVEKVSHTKASILDTRKTAPGLRYFDKEAVRIGGGRNH RFGLFDMMLIKDNHIDASGGVANALRKARQYRKKHGLAVKIETEVRSIDELREALSCKPDIVLLDNFGIDLLSDAVAFSK ENYPMVILEASGNVGLHNVAQIAETGVDYISIGELTHSVKALDLSMTISLD >Mature_291_residues MNKAQQDFYEGCRSRAVMLALEEDRYIGDITTLSTIDDNRVGRAEVRAKEDGILAGAEVARQVFAACDGAVSVVCHHSDG DQLMVGDLVLEVSGKLAPLLVGERTALNFMQRMSGIATKTKLFVEKVSHTKASILDTRKTAPGLRYFDKEAVRIGGGRNH RFGLFDMMLIKDNHIDASGGVANALRKARQYRKKHGLAVKIETEVRSIDELREALSCKPDIVLLDNFGIDLLSDAVAFSK ENYPMVILEASGNVGLHNVAQIAETGVDYISIGELTHSVKALDLSMTISLD
Specific function: Involved in the catabolism of quinolinic acid (QA) [H]
COG id: COG0157
COG function: function code H; Nicotinate-nucleotide pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadC/modD family [H]
Homologues:
Organism=Homo sapiens, GI45269149, Length=248, Percent_Identity=37.0967741935484, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI1786299, Length=256, Percent_Identity=41.796875, Blast_Score=173, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321162, Length=256, Percent_Identity=32.8125, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR004393 - InterPro: IPR002638 - InterPro: IPR022412 [H]
Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]
EC number: =2.4.2.19 [H]
Molecular weight: Translated: 31779; Mature: 31779
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAQQDFYEGCRSRAVMLALEEDRYIGDITTLSTIDDNRVGRAEVRAKEDGILAGAEVA CCCHHHHHHHHHHCCEEEEEEECCCEEECEEEEEECCCCCCCHHHEEECCCCCEEHHHHH RQVFAACDGAVSVVCHHSDGDQLMVGDLVLEVSGKLAPLLVGERTALNFMQRMSGIATKT HHHHHHCCCEEEEEEECCCCCEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHCHHHHH KLFVEKVSHTKASILDTRKTAPGLRYFDKEAVRIGGGRNHRFGLFDMMLIKDNHIDASGG HHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHEEECCCCCCCCCCEEEEEEECCCCCCCCC VANALRKARQYRKKHGLAVKIETEVRSIDELREALSCKPDIVLLDNFGIDLLSDAVAFSK HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC ENYPMVILEASGNVGLHNVAQIAETGVDYISIGELTHSVKALDLSMTISLD CCCCEEEEECCCCCCHHHHHHHHHCCCCEEEHHHHHHHHEEEEEEEEEEEC >Mature Secondary Structure MNKAQQDFYEGCRSRAVMLALEEDRYIGDITTLSTIDDNRVGRAEVRAKEDGILAGAEVA CCCHHHHHHHHHHCCEEEEEEECCCEEECEEEEEECCCCCCCHHHEEECCCCCEEHHHHH RQVFAACDGAVSVVCHHSDGDQLMVGDLVLEVSGKLAPLLVGERTALNFMQRMSGIATKT HHHHHHCCCEEEEEEECCCCCEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHCHHHHH KLFVEKVSHTKASILDTRKTAPGLRYFDKEAVRIGGGRNHRFGLFDMMLIKDNHIDASGG HHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHEEECCCCCCCCCCEEEEEEECCCCCCCCC VANALRKARQYRKKHGLAVKIETEVRSIDELREALSCKPDIVLLDNFGIDLLSDAVAFSK HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC ENYPMVILEASGNVGLHNVAQIAETGVDYISIGELTHSVKALDLSMTISLD CCCCEEEEECCCCCCHHHHHHHHHCCCCEEEHHHHHHHHEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 8444804; 9298659 [H]