| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ytoA [H]
Identifier: 119358043
GI number: 119358043
Start: 2604148
End: 2604669
Strand: Reverse
Name: ytoA [H]
Synonym: Cpha266_2271
Alternate gene names: 119358043
Gene position: 2604669-2604148 (Counterclockwise)
Preceding gene: 119358049
Following gene: 119358041
Centisome position: 83.11
GC content: 52.3
Gene sequence:
>522_bases ATGGGAAAAGTGTTGCCTTACTGCGGGGTCAATCCCGTCATTCATGAAACGGTATTCATGACTGATGGCGCTTTTGTTGT TGGCGATGTGCATATCGGCGCATATTCAAGCGTCTGGTTCAATGCGGTTGTTCGCGGCGATGTCTGTCCGATCCGAATCG GGGAGAAGTGCAGCGTGCAGGACAATGCAACGCTGCATGTGACGCATGATACCGGACCGCTCACTATCGGCAACTGCGTG ACGATCGGTCACGGCGCAGTGCTTCATGCCTGTACGGTGAAAGATCACGTTCTGATAGGAATGGGTGCGGTGCTTCTCGA TGACTGTATTGTTGAGTCCTGGTCGATAGTTGCAGCAGGCTCTCTTGTCAAGCAGGGATTTACCGTGCCGGAGGGCATGC TTGTTGCAGGTGTTCCCGCCAGGGTCATGAGGCCGATAACCGAAGCGGAACGGCGCAATATTGAGGAATCACCTGAAAAT TATGTCAGGTATTCCAATAACTATCGCGATGCAGAACAATGA
Upstream 100 bases:
>100_bases CCGCTGCTGAAAAAGTTTGTAGTTTTTATTTGATTCTGCTCTATCTGTCGATGAAGCAGATGCGATGTATTCAATGTACA ATTATTAAAAACAGGAAAGT
Downstream 100 bases:
>100_bases GAGCGATTGCATCCTGAATTCCCGGCAGATGTTTTTATCGGCGAAGCCAGAGAAAACCAACGGACAATTCTCTTTTTCGC GTCAATTCGCGTTAATTCGT
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGKVLPYCGVNPVIHETVFMTDGAFVVGDVHIGAYSSVWFNAVVRGDVCPIRIGEKCSVQDNATLHVTHDTGPLTIGNCV TIGHGAVLHACTVKDHVLIGMGAVLLDDCIVESWSIVAAGSLVKQGFTVPEGMLVAGVPARVMRPITEAERRNIEESPEN YVRYSNNYRDAEQ
Sequences:
>Translated_173_residues MGKVLPYCGVNPVIHETVFMTDGAFVVGDVHIGAYSSVWFNAVVRGDVCPIRIGEKCSVQDNATLHVTHDTGPLTIGNCV TIGHGAVLHACTVKDHVLIGMGAVLLDDCIVESWSIVAAGSLVKQGFTVPEGMLVAGVPARVMRPITEAERRNIEESPEN YVRYSNNYRDAEQ >Mature_172_residues GKVLPYCGVNPVIHETVFMTDGAFVVGDVHIGAYSSVWFNAVVRGDVCPIRIGEKCSVQDNATLHVTHDTGPLTIGNCVT IGHGAVLHACTVKDHVLIGMGAVLLDDCIVESWSIVAAGSLVKQGFTVPEGMLVAGVPARVMRPITEAERRNIEESPENY VRYSNNYRDAEQ
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=177, Percent_Identity=40.6779661016949, Blast_Score=139, Evalue=8e-35, Organism=Escherichia coli, GI87081681, Length=154, Percent_Identity=35.7142857142857, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787667, Length=144, Percent_Identity=35.4166666666667, Blast_Score=91, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18636; Mature: 18504
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVLPYCGVNPVIHETVFMTDGAFVVGDVHIGAYSSVWFNAVVRGDVCPIRIGEKCSVQ CCCCCCCCCCCHHHHEEEEEECCEEEEEEEEECCHHHHHHHHEECCCCCEEEECCCCCCC DNATLHVTHDTGPLTIGNCVTIGHGAVLHACTVKDHVLIGMGAVLLDDCIVESWSIVAAG CCCEEEEEECCCCEEECCEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCEEEHH SLVKQGFTVPEGMLVAGVPARVMRPITEAERRNIEESPENYVRYSNNYRDAEQ HHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCC >Mature Secondary Structure GKVLPYCGVNPVIHETVFMTDGAFVVGDVHIGAYSSVWFNAVVRGDVCPIRIGEKCSVQ CCCCCCCCCCHHHHEEEEEECCEEEEEEEEECCHHHHHHHHEECCCCCEEEECCCCCCC DNATLHVTHDTGPLTIGNCVTIGHGAVLHACTVKDHVLIGMGAVLLDDCIVESWSIVAAG CCCEEEEEECCCCEEECCEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCEEEHH SLVKQGFTVPEGMLVAGVPARVMRPITEAERRNIEESPENYVRYSNNYRDAEQ HHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]