| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358036
Identifier: 119358036
GI number: 119358036
Start: 2594437
End: 2595744
Strand: Reverse
Name: 119358036
Synonym: Cpha266_2264
Alternate gene names: NA
Gene position: 2595744-2594437 (Counterclockwise)
Preceding gene: 119358037
Following gene: 119358035
Centisome position: 82.83
GC content: 58.72
Gene sequence:
>1308_bases GTGAGTACAACAGCAAGGGTAAACCTGTGGGGGCGCACGATCGGGGCTGTATCGCTCGGTAGCGACGCTGCGACTGCAAC CTTCGAGTACGATCCGGCCTTCGTTCAGAGCGGCATCGAAATCGCCCCGTTGACCATGCCGCTCTCCGGTCAGCTCTACT CCTTTCCCTCGCTGCGTCCCGAAACCTTCCATGGGCTTCCGGGACTGTTGGCGGATTCGCTGCCGGATCGGTTCGGCAAT GCGCTGATCGATGCCTGGCTGGCCCGTTCCGGTCGCACACCCGGTTCCTTCAATGCCGTCGAGAGGCTCTGTTATACGGG GTCTCGGGGCATGGGCGCCCTTGAATATGCTCCAGCCATACGGTTGGGGGTCTCCGGCTCTGCGCCGGTCGAAATCGAAC GGTTGGTCGAGTTGGCTTCGGAGGTGTTGACCCATCGCAACGATCTGCAGGTCTGGTTCCACGATGAGGGCAAGGAGCTT GCGCTCGGGGAGATTCTCCGGGTCGGCACCTCCGCGGGCGGAGCGAGAGCCAAGGCGGTGATTGCCTGGAACCCGGAAAC CGACGAAGTTCGTTCAGGCCAGGTGAAGGCCGGAAAAGGGTTCGAGTACTGGTTGCTCAAGTTCGACGGGGTGAGTGGCA ACAAGGACAAGGAGCTGGAAGATCCAAAAGGGTACGGTGCAATCGAGTACGCATACTACCGCATGGCGCTGGATGCGGGA ATCACCATGACGCCCTGCCGACTGTTCGAGGAAAACGGTCGTCGCCATTTTATGACGAGGCGCTTTGACCGGTTGGAGGA TGGAGGCAAACTGCACATGCAGTCGCTCTGCGGCATAGCGCATTACGACTTCAATCAGGCGGGAGCATACGGGTATGAAC AGGCGATGCAGGTCATTCGACGCCTTGGTTTGCCGATGGCTTCCGTCGAGGAACAGTTCCGGCGAATGGTGTTCAATATC GTGGCCCGCAATCAGGATGACCATGTGAAGAACATTGCCTTTCTGATGGACAGGTCGGGCAACTGGTCGCTTGCGCCAGC GTTCGATATTACCTGGAGCTATCAACCGGGGGGAGCGTGGACATCGACCCATCAGATGACGATGAACGGCAAACGGAGCG GATTCCTGCCGGACTATTTCAAGGCATGTGCGAAAAGCGCATCCATGAAACGCGGGCGAGCCGAAACCATCGTCGCTGAA GTGCAGGACGTTGTTCGCAGATGGCATGATTATGCCGAGGAGTCGCGCGTCACTCCCCGACAACGGGATAAGATTGCAAC AACGCTGGGACTGGAGGGCTTTGTATAA
Upstream 100 bases:
>100_bases GGCCGATGGAGTTGCTGAAGCTGAAAGGCAAGGCGCGAAAGCGTGCAAGAACCAAACAGAAGCCAGCGGAAGAAAAGCCC TGGACGTGGGGTGACGAGTC
Downstream 100 bases:
>100_bases GAGTTGAGAGGAGAGCGGGTGCTTCTTTCCGGCAGTGCCGTCACCGTTATGAAGACAACCGTTACCTTCTGAACATCACA AGAAAACCCGAGGGAATGCA
Product: HipA domain-containing protein
Products: NA
Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Hipa Domain Protein; HipA-Like C-Terminal Domain Family; HipA-Like; Protein With HipA-Like Domain; Hipa Protein; HipA-Family Phosphatidylinositol 3/4-Kinase; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; Transcriptional Regulator; Amidophosphoribosyl Transferase; HipA-Like N-Terminal Domain Family; HipA Family Protein; Capsule Biosynthesis Protein HipA; Capsule Biosynthesis -Like Protein; HipA-Like Protein
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSTTARVNLWGRTIGAVSLGSDAATATFEYDPAFVQSGIEIAPLTMPLSGQLYSFPSLRPETFHGLPGLLADSLPDRFGN ALIDAWLARSGRTPGSFNAVERLCYTGSRGMGALEYAPAIRLGVSGSAPVEIERLVELASEVLTHRNDLQVWFHDEGKEL ALGEILRVGTSAGGARAKAVIAWNPETDEVRSGQVKAGKGFEYWLLKFDGVSGNKDKELEDPKGYGAIEYAYYRMALDAG ITMTPCRLFEENGRRHFMTRRFDRLEDGGKLHMQSLCGIAHYDFNQAGAYGYEQAMQVIRRLGLPMASVEEQFRRMVFNI VARNQDDHVKNIAFLMDRSGNWSLAPAFDITWSYQPGGAWTSTHQMTMNGKRSGFLPDYFKACAKSASMKRGRAETIVAE VQDVVRRWHDYAEESRVTPRQRDKIATTLGLEGFV
Sequences:
>Translated_435_residues MSTTARVNLWGRTIGAVSLGSDAATATFEYDPAFVQSGIEIAPLTMPLSGQLYSFPSLRPETFHGLPGLLADSLPDRFGN ALIDAWLARSGRTPGSFNAVERLCYTGSRGMGALEYAPAIRLGVSGSAPVEIERLVELASEVLTHRNDLQVWFHDEGKEL ALGEILRVGTSAGGARAKAVIAWNPETDEVRSGQVKAGKGFEYWLLKFDGVSGNKDKELEDPKGYGAIEYAYYRMALDAG ITMTPCRLFEENGRRHFMTRRFDRLEDGGKLHMQSLCGIAHYDFNQAGAYGYEQAMQVIRRLGLPMASVEEQFRRMVFNI VARNQDDHVKNIAFLMDRSGNWSLAPAFDITWSYQPGGAWTSTHQMTMNGKRSGFLPDYFKACAKSASMKRGRAETIVAE VQDVVRRWHDYAEESRVTPRQRDKIATTLGLEGFV >Mature_434_residues STTARVNLWGRTIGAVSLGSDAATATFEYDPAFVQSGIEIAPLTMPLSGQLYSFPSLRPETFHGLPGLLADSLPDRFGNA LIDAWLARSGRTPGSFNAVERLCYTGSRGMGALEYAPAIRLGVSGSAPVEIERLVELASEVLTHRNDLQVWFHDEGKELA LGEILRVGTSAGGARAKAVIAWNPETDEVRSGQVKAGKGFEYWLLKFDGVSGNKDKELEDPKGYGAIEYAYYRMALDAGI TMTPCRLFEENGRRHFMTRRFDRLEDGGKLHMQSLCGIAHYDFNQAGAYGYEQAMQVIRRLGLPMASVEEQFRRMVFNIV ARNQDDHVKNIAFLMDRSGNWSLAPAFDITWSYQPGGAWTSTHQMTMNGKRSGFLPDYFKACAKSASMKRGRAETIVAEV QDVVRRWHDYAEESRVTPRQRDKIATTLGLEGFV
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48292; Mature: 48161
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTARVNLWGRTIGAVSLGSDAATATFEYDPAFVQSGIEIAPLTMPLSGQLYSFPSLRP CCCCEEEEECCCEECEEEECCCCCEEEEECCHHHHHCCCEEEEEEECCCCCEECCCCCCC ETFHGLPGLLADSLPDRFGNALIDAWLARSGRTPGSFNAVERLCYTGSRGMGALEYAPAI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHCCEE RLGVSGSAPVEIERLVELASEVLTHRNDLQVWFHDEGKELALGEILRVGTSAGGARAKAV EECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEE IAWNPETDEVRSGQVKAGKGFEYWLLKFDGVSGNKDKELEDPKGYGAIEYAYYRMALDAG EEECCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC ITMTPCRLFEENGRRHFMTRRFDRLEDGGKLHMQSLCGIAHYDFNQAGAYGYEQAMQVIR CEECHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHH RLGLPMASVEEQFRRMVFNIVARNQDDHVKNIAFLMDRSGNWSLAPAFDITWSYQPGGAW HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEHEEECCCCCCCCEEEEEEEEECCCCCC TSTHQMTMNGKRSGFLPDYFKACAKSASMKRGRAETIVAEVQDVVRRWHDYAEESRVTPR CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH QRDKIATTLGLEGFV HHHHHHHHHCCCCCC >Mature Secondary Structure STTARVNLWGRTIGAVSLGSDAATATFEYDPAFVQSGIEIAPLTMPLSGQLYSFPSLRP CCCEEEEECCCEECEEEECCCCCEEEEECCHHHHHCCCEEEEEEECCCCCEECCCCCCC ETFHGLPGLLADSLPDRFGNALIDAWLARSGRTPGSFNAVERLCYTGSRGMGALEYAPAI HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHCCEE RLGVSGSAPVEIERLVELASEVLTHRNDLQVWFHDEGKELALGEILRVGTSAGGARAKAV EECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEE IAWNPETDEVRSGQVKAGKGFEYWLLKFDGVSGNKDKELEDPKGYGAIEYAYYRMALDAG EEECCCCCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC ITMTPCRLFEENGRRHFMTRRFDRLEDGGKLHMQSLCGIAHYDFNQAGAYGYEQAMQVIR CEECHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHH RLGLPMASVEEQFRRMVFNIVARNQDDHVKNIAFLMDRSGNWSLAPAFDITWSYQPGGAW HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEHEEECCCCCCCCEEEEEEEEECCCCCC TSTHQMTMNGKRSGFLPDYFKACAKSASMKRGRAETIVAEVQDVVRRWHDYAEESRVTPR CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH QRDKIATTLGLEGFV HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA