| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119358035
Identifier: 119358035
GI number: 119358035
Start: 2592471
End: 2594162
Strand: Reverse
Name: 119358035
Synonym: Cpha266_2263
Alternate gene names: NA
Gene position: 2594162-2592471 (Counterclockwise)
Preceding gene: 119358036
Following gene: 119358034
Centisome position: 82.78
GC content: 50.71
Gene sequence:
>1692_bases ATGCATCTCCCTACTTGCAGGAGCGATGTGAACAAAGGCTCCCGTTCCGTTCGCCTTATTGCCACGTTTGCCATTGTACA ACTGGCGCTACATCTCTATACAGTCGTTGAATCACCGGACCCGCGTTTGTTTTTGCCGCATTTTATAGCATGGAGCCATG ACCTGCTGATACTCTCGATTTTGTTTTTCGTCTTCAGCAGAGCAATCGCCCTGTTTCCATCGCGGTTTCGGAATTGCGCT GAACTCATGACTCTGCCGATCATCGCTCTGGCGCTTCTGCCACTGACGCTCTATCCCCGGATGCTTCGCGAGTACCTCTC CTTTCCAGTGAACCTGTTTACGGCAACCCCTGCATCAGCATCTGCGATGCTGACCAAATATCTTGGGCTTTCGAAACTGA TGCCGGTAGCCTTTGCGGTAGCTTCCGCTCTGGTTGCGCTGCTGATGCTGCCGTTTCCTTCGTGGTCGAAAAAGGGAAAG CTCTTGTTCACGGTTTTCCGGGGAATTCTGCTTACCGTTGCAATCCTGACACTGCCGCGTTCACCCCATCCGGTTGTAAA CAGCCTTAAAGAAGAGATGTCGGCTGTACTTTCTCACGAACGACGGGAGGTGCCTGCGCTTTTTTCCGCACCACACCGAC AGGATAATCAGAAGCCTTCAGGTTCCGGCGTCTTGTCGTTGCAGGAAAAACTGAAAGCGGACCATATCTATCTGATTGTG CTCGAAGGGGTGAGTGCAGATCAGTTCGAGAACGCAATTTCCGGTACAGAGTCAAGGTTTTATCGTCGCATCTCCAGACA TGCCAGATATTTCGACCGGTACTACACGACCAATCTCGACTCCTATACCAGCCTGATCGCCATGCTCACATCCGAGCAGG TCCCGTACCGTTCTTATACCGATACCGGATTGTACGATGCGGTCAACAATGCTCCTAACCTTGCACGCAGTTTTAAAGAT ATCGGATTCCATACTCTTTTTATCAGCATCTACGACGATCAGCCGTTCATCCCTGTTCGTCGGGACTGGTCGAAAATCAT GCACCGACATGACCTTCCTGCCGGAAAACAATGGGTCTCCGTTGAATCAAGCCGCATGGAGTCCGCAACAGAGGACAGGG CTGCGCTTTCGACGCTGGGAAAGCTCCCCTCGCTGTATCCGAAGACTTTCGTTTTGCACGAACTGGCCTATGGCCACACG ACGGAGTGGCGGGCAAAGACAGGTATTCCACAACTTGCTTATTACGATACCTATCTGAATGAACTGCTTGACCTGCTCAT TGCGAATGGAACCTGGTCAAAAAGCCTTATGGTAATCGTTTCGGACCATGGCGACCGGGCGAAAGGAGCGAATACCGAAA GCTATCGTGTGCCGTTGATGATTGTTGGGCAGGATGTGGCGCAAGGCATCGATCATACGTTTCGCTCTCATCTGGAGCTG CAGCAGATCATGGTATCATCGCTAACCGGAAACACCATGCCTGAGCCAAAAAAGGAGGCGATTGTTGTCGGTTCAACCGA GCGCTGGATATATGGACTGATCGATGCTCACGGCGATCATCTGGTTATCGATGATCGTACCGGCAAAGTTGTCGCATCGA ATGGAAAATTGAGTTCAAAGGCTGTTCACAACAGATTTCAGGAAATAATCAACAATTTCGGAATGCGTTTTGGTCCGGAA AACGAAAAATAG
Upstream 100 bases:
>100_bases GCAAAAGATGATCCTGTTTATTTACGGTTACATGCGAAAGATTTACACCGCGAGCGACGTCTGACTTACAAAGACGAATT CCCATCAATCCGGATTGACC
Downstream 100 bases:
>100_bases TAACGAGTATGCGAGAGGACGTTTATTCGTATCTAAAACAAGTCGCAAGTGTTGTGTATTGGAGTAAAAACAACTCCCGG TTGCTGAAACATAAACGAGC
Product: sulfatase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MHLPTCRSDVNKGSRSVRLIATFAIVQLALHLYTVVESPDPRLFLPHFIAWSHDLLILSILFFVFSRAIALFPSRFRNCA ELMTLPIIALALLPLTLYPRMLREYLSFPVNLFTATPASASAMLTKYLGLSKLMPVAFAVASALVALLMLPFPSWSKKGK LLFTVFRGILLTVAILTLPRSPHPVVNSLKEEMSAVLSHERREVPALFSAPHRQDNQKPSGSGVLSLQEKLKADHIYLIV LEGVSADQFENAISGTESRFYRRISRHARYFDRYYTTNLDSYTSLIAMLTSEQVPYRSYTDTGLYDAVNNAPNLARSFKD IGFHTLFISIYDDQPFIPVRRDWSKIMHRHDLPAGKQWVSVESSRMESATEDRAALSTLGKLPSLYPKTFVLHELAYGHT TEWRAKTGIPQLAYYDTYLNELLDLLIANGTWSKSLMVIVSDHGDRAKGANTESYRVPLMIVGQDVAQGIDHTFRSHLEL QQIMVSSLTGNTMPEPKKEAIVVGSTERWIYGLIDAHGDHLVIDDRTGKVVASNGKLSSKAVHNRFQEIINNFGMRFGPE NEK
Sequences:
>Translated_563_residues MHLPTCRSDVNKGSRSVRLIATFAIVQLALHLYTVVESPDPRLFLPHFIAWSHDLLILSILFFVFSRAIALFPSRFRNCA ELMTLPIIALALLPLTLYPRMLREYLSFPVNLFTATPASASAMLTKYLGLSKLMPVAFAVASALVALLMLPFPSWSKKGK LLFTVFRGILLTVAILTLPRSPHPVVNSLKEEMSAVLSHERREVPALFSAPHRQDNQKPSGSGVLSLQEKLKADHIYLIV LEGVSADQFENAISGTESRFYRRISRHARYFDRYYTTNLDSYTSLIAMLTSEQVPYRSYTDTGLYDAVNNAPNLARSFKD IGFHTLFISIYDDQPFIPVRRDWSKIMHRHDLPAGKQWVSVESSRMESATEDRAALSTLGKLPSLYPKTFVLHELAYGHT TEWRAKTGIPQLAYYDTYLNELLDLLIANGTWSKSLMVIVSDHGDRAKGANTESYRVPLMIVGQDVAQGIDHTFRSHLEL QQIMVSSLTGNTMPEPKKEAIVVGSTERWIYGLIDAHGDHLVIDDRTGKVVASNGKLSSKAVHNRFQEIINNFGMRFGPE NEK >Mature_563_residues MHLPTCRSDVNKGSRSVRLIATFAIVQLALHLYTVVESPDPRLFLPHFIAWSHDLLILSILFFVFSRAIALFPSRFRNCA ELMTLPIIALALLPLTLYPRMLREYLSFPVNLFTATPASASAMLTKYLGLSKLMPVAFAVASALVALLMLPFPSWSKKGK LLFTVFRGILLTVAILTLPRSPHPVVNSLKEEMSAVLSHERREVPALFSAPHRQDNQKPSGSGVLSLQEKLKADHIYLIV LEGVSADQFENAISGTESRFYRRISRHARYFDRYYTTNLDSYTSLIAMLTSEQVPYRSYTDTGLYDAVNNAPNLARSFKD IGFHTLFISIYDDQPFIPVRRDWSKIMHRHDLPAGKQWVSVESSRMESATEDRAALSTLGKLPSLYPKTFVLHELAYGHT TEWRAKTGIPQLAYYDTYLNELLDLLIANGTWSKSLMVIVSDHGDRAKGANTESYRVPLMIVGQDVAQGIDHTFRSHLEL QQIMVSSLTGNTMPEPKKEAIVVGSTERWIYGLIDAHGDHLVIDDRTGKVVASNGKLSSKAVHNRFQEIINNFGMRFGPE NEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63344; Mature: 63344
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPTCRSDVNKGSRSVRLIATFAIVQLALHLYTVVESPDPRLFLPHFIAWSHDLLILSI CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH LFFVFSRAIALFPSRFRNCAELMTLPIIALALLPLTLYPRMLREYLSFPVNLFTATPASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH SAMLTKYLGLSKLMPVAFAVASALVALLMLPFPSWSKKGKLLFTVFRGILLTVAILTLPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC SPHPVVNSLKEEMSAVLSHERREVPALFSAPHRQDNQKPSGSGVLSLQEKLKADHIYLIV CCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE LEGVSADQFENAISGTESRFYRRISRHARYFDRYYTTNLDSYTSLIAMLTSEQVPYRSYT EECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC DTGLYDAVNNAPNLARSFKDIGFHTLFISIYDDQPFIPVRRDWSKIMHRHDLPAGKQWVS CCCHHHHHCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEE VESSRMESATEDRAALSTLGKLPSLYPKTFVLHELAYGHTTEWRAKTGIPQLAYYDTYLN CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHH ELLDLLIANGTWSKSLMVIVSDHGDRAKGANTESYRVPLMIVGQDVAQGIDHTFRSHLEL HHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH QQIMVSSLTGNTMPEPKKEAIVVGSTERWIYGLIDAHGDHLVIDDRTGKVVASNGKLSSK HHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCEEECCCCCHHH AVHNRFQEIINNFGMRFGPENEK HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHLPTCRSDVNKGSRSVRLIATFAIVQLALHLYTVVESPDPRLFLPHFIAWSHDLLILSI CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHH LFFVFSRAIALFPSRFRNCAELMTLPIIALALLPLTLYPRMLREYLSFPVNLFTATPASA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH SAMLTKYLGLSKLMPVAFAVASALVALLMLPFPSWSKKGKLLFTVFRGILLTVAILTLPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC SPHPVVNSLKEEMSAVLSHERREVPALFSAPHRQDNQKPSGSGVLSLQEKLKADHIYLIV CCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE LEGVSADQFENAISGTESRFYRRISRHARYFDRYYTTNLDSYTSLIAMLTSEQVPYRSYT EECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC DTGLYDAVNNAPNLARSFKDIGFHTLFISIYDDQPFIPVRRDWSKIMHRHDLPAGKQWVS CCCHHHHHCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEE VESSRMESATEDRAALSTLGKLPSLYPKTFVLHELAYGHTTEWRAKTGIPQLAYYDTYLN CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHH ELLDLLIANGTWSKSLMVIVSDHGDRAKGANTESYRVPLMIVGQDVAQGIDHTFRSHLEL HHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH QQIMVSSLTGNTMPEPKKEAIVVGSTERWIYGLIDAHGDHLVIDDRTGKVVASNGKLSSK HHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCEEECCCCCHHH AVHNRFQEIINNFGMRFGPENEK HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA