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The map label for this gene is 119358015

Identifier: 119358015

GI number: 119358015

Start: 2565367

End: 2565600

Strand: Reverse

Name: 119358015

Synonym: Cpha266_2239

Alternate gene names: NA

Gene position: 2565600-2565367 (Counterclockwise)

Preceding gene: 119358016

Following gene: 119358014

Centisome position: 81.87

GC content: 47.44

Gene sequence:

>234_bases
TTGCATTATCCGGTCATTGGAGTTGGTCAACTGTGCAAGCAGGAGGAGCTGTCTGCAATGACAAAGCCTTATGAGATTTC
CAAACACCTCGTTCTGGAATCATACAGAACGGTCAAAGCAAACAGAGGAGGTGCCGGAGTAGATCAGGAATCGATCGAAG
CCTTCGAGAAGAACCTGAAAGGTAATTTGTACAAGCTCTGCAAAGGGAATAGGGGACGCAGTGCAATAGCGTAG

Upstream 100 bases:

>100_bases
GTGGCACACTTTCGCCCGGAATTAGTGGTACACTTTCACCGGTATACTCAGCAATTCGTAGTAGCAATGAAGGTTCTGTA
ATGGAACTGGAGCGAAGGGA

Downstream 100 bases:

>100_bases
AAAATTGTATTTTGCAGTGAGGAATAAACGATTTGTGTAGGCAGCTTTTGAAAAGCAAAAGACAAGAGAGCCATATGCCA
CGAGGAGCGAGACTTGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Reverse Transcriptase/Maturase; Reverse Transcriptase/Retron Type

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MHYPVIGVGQLCKQEELSAMTKPYEISKHLVLESYRTVKANRGGAGVDQESIEAFEKNLKGNLYKLCKGNRGRSAIA

Sequences:

>Translated_77_residues
MHYPVIGVGQLCKQEELSAMTKPYEISKHLVLESYRTVKANRGGAGVDQESIEAFEKNLKGNLYKLCKGNRGRSAIA
>Mature_77_residues
MHYPVIGVGQLCKQEELSAMTKPYEISKHLVLESYRTVKANRGGAGVDQESIEAFEKNLKGNLYKLCKGNRGRSAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8526; Mature: 8526

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYPVIGVGQLCKQEELSAMTKPYEISKHLVLESYRTVKANRGGAGVDQESIEAFEKNLK
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
GNLYKLCKGNRGRSAIA
CCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHYPVIGVGQLCKQEELSAMTKPYEISKHLVLESYRTVKANRGGAGVDQESIEAFEKNLK
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
GNLYKLCKGNRGRSAIA
CCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA