Click here to switch to the map view.

The map label for this gene is 119358003

Identifier: 119358003

GI number: 119358003

Start: 2549929

End: 2550417

Strand: Direct

Name: 119358003

Synonym: Cpha266_2225

Alternate gene names: NA

Gene position: 2549929-2550417 (Clockwise)

Preceding gene: 119358000

Following gene: 119358009

Centisome position: 81.37

GC content: 53.78

Gene sequence:

>489_bases
ATGCTGATAGAAGAAGCACATGAAAACGGAGCGCGCTACAGCAAGGCCTGTGAGGTTGTGGGGATCTCTCTTCGGACCCT
GCAGCGCTGGAAAAGCGGTTGCCTGAACGACCGGCGAAAAGGCTCCAAGAAAACCGTTCCGAGAAAAGTGCCCCAGGAAA
TCAGGGAAGAGATCGTCGCAGTCTGCAATGAACAGCGATTCCGGGATCAGACGCCGTATGAAATCGTCCCGCAACTCCTG
ACAGAAGGCCGGTATCTGGCCTCTGAAAGCACGATCTACCGTATCCTGAGGGAAAGGGACCTGCTGCACCATAGGAGCGA
ACTGCGCGTACGCCATCGCCACTCCAAGCCGCCGGAACGACGGGCGACAGGGTCGGATCAAGTGTACACGTGGGACATCA
CCTACACGCCATCTAAGGGACATCCCATAGTGAGAAAAGCAAAATCTTTTTTTTGTCAAGTGTACAATATTACCCTACTG
CGTCGATAA

Upstream 100 bases:

>100_bases
CTGCACACATCTTTTGTTTTCTCACTGAACTGCAAAACACATTCTTCTACGCTATTGCACTGCGTCCCCTCTAAGAACAC
CCTACAAGACTGAAGTCATT

Downstream 100 bases:

>100_bases
CGCTAAAAAAATGCCGTATTAGTCAAGCTATGTCAGCGAGTTTCCCACCGATAATGAATCCTGTACCTCATCGTTATTGA
GTATCCGACATGCTGTGCTT

Product: putative transposase

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; ISRin3 Transposase; Transposase IS3 Family; Integrase Catalytic Domain-Containing Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLIEEAHENGARYSKACEVVGISLRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVAVCNEQRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRERDLLHHRSELRVRHRHSKPPERRATGSDQVYTWDITYTPSKGHPIVRKAKSFFCQVYNITLL
RR

Sequences:

>Translated_162_residues
MLIEEAHENGARYSKACEVVGISLRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVAVCNEQRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRERDLLHHRSELRVRHRHSKPPERRATGSDQVYTWDITYTPSKGHPIVRKAKSFFCQVYNITLL
RR
>Mature_162_residues
MLIEEAHENGARYSKACEVVGISLRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVAVCNEQRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRERDLLHHRSELRVRHRHSKPPERRATGSDQVYTWDITYTPSKGHPIVRKAKSFFCQVYNITLL
RR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19131; Mature: 19131

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEEAHENGARYSKACEVVGISLRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVA
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHH
VCNEQRFRDQTPYEIVPQLLTEGRYLASESTIYRILRERDLLHHRSELRVRHRHSKPPER
HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RATGSDQVYTWDITYTPSKGHPIVRKAKSFFCQVYNITLLRR
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MLIEEAHENGARYSKACEVVGISLRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVA
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHH
VCNEQRFRDQTPYEIVPQLLTEGRYLASESTIYRILRERDLLHHRSELRVRHRHSKPPER
HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RATGSDQVYTWDITYTPSKGHPIVRKAKSFFCQVYNITLLRR
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA