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The map label for this gene is nisX1 [H]

Identifier: 119357999

GI number: 119357999

Start: 2547742

End: 2548674

Strand: Direct

Name: nisX1 [H]

Synonym: Cpha266_2221

Alternate gene names: 119357999

Gene position: 2547742-2548674 (Clockwise)

Preceding gene: 119357998

Following gene: 119358000

Centisome position: 81.3

GC content: 52.63

Gene sequence:

>933_bases
GTGGTCGGAATCTCTCTTCGGACACTCCAGCGCTGGAAATGCTGCGGGGTCAAGGACAACAGGAAAGGCGCTGTCAAGCG
CGTTGTCCGGAAACTGGAAGCGGAAACCCGTCAGGCCATTATTGGGCACTGCAACACGGAGCGCTATCAGGATCTGAACC
CGCATGAAATCGTGCCGCTCCTGCTCAATGAAGGCGTGTATCTGGCCTCGGTGAGCACGTTTTACCGGGTGCTGAAAGCA
GAGCATCTGGTGCATCACCGGAGCAACACGAGACCGAAGCAAGGATACGGCAAACCGCCGGAACGACTGGCAACAGGCTC
GGATCAGGTGTACTGCTGGGACATCACCTGGCTGCCGAGAACGGTTAAAGGGCTCTTCTTCTATGCCTATGTTGTCATCG
ACATTTTCGATAAAACCATTGTCGGATGGTCGGTACACGAGGAAGAACACGAACAGTATAGCCGTGATCTGTTCGAAAGG
ACGTTGCAAGGCAGGAAGATAGCGCTACGAGCCCTGCATGCCGACAATGGTCATCCGATGAAGGGAATCACGTTGATGGC
TCTGTTGACATCGTTGAACGTCGAAATATCGCATAACCGGCCACGGGTCAGCAACGACAATCCGTTCATCGAATCGTTCT
TTAAAACCCTGAAATATCGGGTCAACTATCCTCTTCGATTCAGAGACCTGATGCATGCTCGGGAATGGATGGCAAGTTTT
GTGAACTGGTACAATACGGAGCACCTGCATTCAGCCATTGGCCATGTGACACCGCACCAGTTACGAACAGGGGAAGCAAG
ATGTATTTTCGAGAGGAGAAACCTTGTTATGCAGCAAGCGCGGACAGCATATCCGGAACGATGGGGATCACGACCGGCAA
AATATTGGGCTTCACCGAAAGAGGTGGTGCTGAATCCCGATAAAGAGCGCTGA

Upstream 100 bases:

>100_bases
AGCACGAGGACGCCTGATCCTTGAGGAGTACAAGGCAGAAGTCATCGAGCTGATTGAAGAAGCTCATGACAACGGAGCGC
GGTACAGCAAGGCCTGTCAG

Downstream 100 bases:

>100_bases
TTTTTTCAATAACCGGTGACATCTATGTTGACATTAAGCGTTGTTACCCCGGAAAAGAAAAAACAAATCGGCTTGACTGA
TATGAACGAGTGGCAAAAGC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MVGISLRTLQRWKCCGVKDNRKGAVKRVVRKLEAETRQAIIGHCNTERYQDLNPHEIVPLLLNEGVYLASVSTFYRVLKA
EHLVHHRSNTRPKQGYGKPPERLATGSDQVYCWDITWLPRTVKGLFFYAYVVIDIFDKTIVGWSVHEEEHEQYSRDLFER
TLQGRKIALRALHADNGHPMKGITLMALLTSLNVEISHNRPRVSNDNPFIESFFKTLKYRVNYPLRFRDLMHAREWMASF
VNWYNTEHLHSAIGHVTPHQLRTGEARCIFERRNLVMQQARTAYPERWGSRPAKYWASPKEVVLNPDKER

Sequences:

>Translated_310_residues
MVGISLRTLQRWKCCGVKDNRKGAVKRVVRKLEAETRQAIIGHCNTERYQDLNPHEIVPLLLNEGVYLASVSTFYRVLKA
EHLVHHRSNTRPKQGYGKPPERLATGSDQVYCWDITWLPRTVKGLFFYAYVVIDIFDKTIVGWSVHEEEHEQYSRDLFER
TLQGRKIALRALHADNGHPMKGITLMALLTSLNVEISHNRPRVSNDNPFIESFFKTLKYRVNYPLRFRDLMHAREWMASF
VNWYNTEHLHSAIGHVTPHQLRTGEARCIFERRNLVMQQARTAYPERWGSRPAKYWASPKEVVLNPDKER
>Mature_310_residues
MVGISLRTLQRWKCCGVKDNRKGAVKRVVRKLEAETRQAIIGHCNTERYQDLNPHEIVPLLLNEGVYLASVSTFYRVLKA
EHLVHHRSNTRPKQGYGKPPERLATGSDQVYCWDITWLPRTVKGLFFYAYVVIDIFDKTIVGWSVHEEEHEQYSRDLFER
TLQGRKIALRALHADNGHPMKGITLMALLTSLNVEISHNRPRVSNDNPFIESFFKTLKYRVNYPLRFRDLMHAREWMASF
VNWYNTEHLHSAIGHVTPHQLRTGEARCIFERRNLVMQQARTAYPERWGSRPAKYWASPKEVVLNPDKER

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=280, Percent_Identity=26.4285714285714, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1787263, Length=280, Percent_Identity=26.4285714285714, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1786753, Length=280, Percent_Identity=26.4285714285714, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1786570, Length=280, Percent_Identity=26.4285714285714, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1786490, Length=280, Percent_Identity=26.4285714285714, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36320; Mature: 36320

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGISLRTLQRWKCCGVKDNRKGAVKRVVRKLEAETRQAIIGHCNTERYQDLNPHEIVPL
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
LLNEGVYLASVSTFYRVLKAEHLVHHRSNTRPKQGYGKPPERLATGSDQVYCWDITWLPR
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECHH
TVKGLFFYAYVVIDIFDKTIVGWSVHEEEHEQYSRDLFERTLQGRKIALRALHADNGHPM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
KGITLMALLTSLNVEISHNRPRVSNDNPFIESFFKTLKYRVNYPLRFRDLMHAREWMASF
HHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VNWYNTEHLHSAIGHVTPHQLRTGEARCIFERRNLVMQQARTAYPERWGSRPAKYWASPK
HHHHCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCCCC
EVVLNPDKER
CEECCCCCCC
>Mature Secondary Structure
MVGISLRTLQRWKCCGVKDNRKGAVKRVVRKLEAETRQAIIGHCNTERYQDLNPHEIVPL
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
LLNEGVYLASVSTFYRVLKAEHLVHHRSNTRPKQGYGKPPERLATGSDQVYCWDITWLPR
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECHH
TVKGLFFYAYVVIDIFDKTIVGWSVHEEEHEQYSRDLFERTLQGRKIALRALHADNGHPM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
KGITLMALLTSLNVEISHNRPRVSNDNPFIESFFKTLKYRVNYPLRFRDLMHAREWMASF
HHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VNWYNTEHLHSAIGHVTPHQLRTGEARCIFERRNLVMQQARTAYPERWGSRPAKYWASPK
HHHHCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHCCCCC
EVVLNPDKER
CEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]