| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357985
Identifier: 119357985
GI number: 119357985
Start: 2534262
End: 2535245
Strand: Reverse
Name: 119357985
Synonym: Cpha266_2204
Alternate gene names: NA
Gene position: 2535245-2534262 (Counterclockwise)
Preceding gene: 119357986
Following gene: 119357982
Centisome position: 80.9
GC content: 50.3
Gene sequence:
>984_bases ATGCCACGAGGAGCGAGACTTGACACACCTGGAACGCTGCATCATGTAATGGTGCGGGGAATTGAACAGGGTAGTATCGT ACGCGACGATAGCGACAGAGTGGAATTTCTTCGCCGTATGGGTTTGCTGGCGAAAACATCGGGGACAAGCATCTACGCAT TTGCTCTGATGACGAACCATGCACATATCCTGCTCAAAAGCGGATCCATCGGATTGTCTCTCTACATGCGCAGGCTGTTG TCGGGATATGCGCAATATTTCAACAGACGACATAAACGCGTAGGCCATCTATTTCAGAACCGGTACAAATCGGTTATCTG CGAAGAAGAGGCATACTTCGACAAGCTGGTGGCATACATCCATCTCAATCCGTTGCGGGCTGGACTTGTTGCCTCATTGC GAGAGCTGGCATTGTATCCCTGGAGCGGTCATGCTGCAATCATGAAAAAGGTATGCTGCGACTGGGTGGAGAGGGAATAT GTGCTGCACTGTTTCGGAAGCAGGGAAGGAGCGGCAAGAGAAGCGTATCTGGCGTTTCTTGAAGAAGAAATGGGTATCGA TCGAGAAAAGGAATTTTCCGGAGGCGGATTGCTTCGCTCGCATGGCGGGTGGGAGCAGGTACAATCCATGCGTAAAAAAG GTACCAAAGTGCTCAGCGACGAGCGGATTCTCGGTAGTGATGCGTTTGTTCGGGACGTGTTGAAAGAAGCGGAAGAGCGC ATGGCGCTGCCGTTATCGGCAGACGAACGTTCGATGTTGATTAACGAGGATATTGAACAGGAATGCCGTAAAGCGGGTAT AACGGAGGCATTTCTGCGATCCGGAAGCAGGAGCGGGATGTTGGCGTCGATAAGAAAAGGGCTTGCGCTGAAGTTTGTCT ATGATTATGGTTTATCGATGGCCGAAACCGGAAGGCGGTTGGGAGTGCCGACGAATAAGGGGAAGGATCTTTTTATTGTT AGCGTACATTTTTCAGAATTCTAA
Upstream 100 bases:
>100_bases TAGGGGACGCAGTGCAATAGCGTAGAAAATTGTATTTTGCAGTGAGAAAACAAAAGATGTGTGCAGGCAGCTTTTGAAAA GCAAAAGACAAGAGAGCCAT
Downstream 100 bases:
>100_bases AGTTACTCCATAAGCAGTTTGTACATTTCTGCATTTTTCGGATCAAGCTCTATCGCTTTGTTAAAATCAGCTAAAGCACT ATTTTTATCGTTATTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MPRGARLDTPGTLHHVMVRGIEQGSIVRDDSDRVEFLRRMGLLAKTSGTSIYAFALMTNHAHILLKSGSIGLSLYMRRLL SGYAQYFNRRHKRVGHLFQNRYKSVICEEEAYFDKLVAYIHLNPLRAGLVASLRELALYPWSGHAAIMKKVCCDWVEREY VLHCFGSREGAAREAYLAFLEEEMGIDREKEFSGGGLLRSHGGWEQVQSMRKKGTKVLSDERILGSDAFVRDVLKEAEER MALPLSADERSMLINEDIEQECRKAGITEAFLRSGSRSGMLASIRKGLALKFVYDYGLSMAETGRRLGVPTNKGKDLFIV SVHFSEF
Sequences:
>Translated_327_residues MPRGARLDTPGTLHHVMVRGIEQGSIVRDDSDRVEFLRRMGLLAKTSGTSIYAFALMTNHAHILLKSGSIGLSLYMRRLL SGYAQYFNRRHKRVGHLFQNRYKSVICEEEAYFDKLVAYIHLNPLRAGLVASLRELALYPWSGHAAIMKKVCCDWVEREY VLHCFGSREGAAREAYLAFLEEEMGIDREKEFSGGGLLRSHGGWEQVQSMRKKGTKVLSDERILGSDAFVRDVLKEAEER MALPLSADERSMLINEDIEQECRKAGITEAFLRSGSRSGMLASIRKGLALKFVYDYGLSMAETGRRLGVPTNKGKDLFIV SVHFSEF >Mature_326_residues PRGARLDTPGTLHHVMVRGIEQGSIVRDDSDRVEFLRRMGLLAKTSGTSIYAFALMTNHAHILLKSGSIGLSLYMRRLLS GYAQYFNRRHKRVGHLFQNRYKSVICEEEAYFDKLVAYIHLNPLRAGLVASLRELALYPWSGHAAIMKKVCCDWVEREYV LHCFGSREGAAREAYLAFLEEEMGIDREKEFSGGGLLRSHGGWEQVQSMRKKGTKVLSDERILGSDAFVRDVLKEAEERM ALPLSADERSMLINEDIEQECRKAGITEAFLRSGSRSGMLASIRKGLALKFVYDYGLSMAETGRRLGVPTNKGKDLFIVS VHFSEF
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36963; Mature: 36832
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGARLDTPGTLHHVMVRGIEQGSIVRDDSDRVEFLRRMGLLAKTSGTSIYAFALMTNH CCCCCCCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCEECCCCEEEEEEEECCC AHILLKSGSIGLSLYMRRLLSGYAQYFNRRHKRVGHLFQNRYKSVICEEEAYFDKLVAYI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLNPLRAGLVASLRELALYPWSGHAAIMKKVCCDWVEREYVLHCFGSREGAAREAYLAFL CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EEEMGIDREKEFSGGGLLRSHGGWEQVQSMRKKGTKVLSDERILGSDAFVRDVLKEAEER HHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHH MALPLSADERSMLINEDIEQECRKAGITEAFLRSGSRSGMLASIRKGLALKFVYDYGLSM HCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCEEEEHHHHCCCH AETGRRLGVPTNKGKDLFIVSVHFSEF HHCCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure PRGARLDTPGTLHHVMVRGIEQGSIVRDDSDRVEFLRRMGLLAKTSGTSIYAFALMTNH CCCCCCCCCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCEECCCCEEEEEEEECCC AHILLKSGSIGLSLYMRRLLSGYAQYFNRRHKRVGHLFQNRYKSVICEEEAYFDKLVAYI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLNPLRAGLVASLRELALYPWSGHAAIMKKVCCDWVEREYVLHCFGSREGAAREAYLAFL CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EEEMGIDREKEFSGGGLLRSHGGWEQVQSMRKKGTKVLSDERILGSDAFVRDVLKEAEER HHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHH MALPLSADERSMLINEDIEQECRKAGITEAFLRSGSRSGMLASIRKGLALKFVYDYGLSM HCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHCCCEEEEHHHHCCCH AETGRRLGVPTNKGKDLFIVSVHFSEF HHCCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA