| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357983
Identifier: 119357983
GI number: 119357983
Start: 2532329
End: 2532886
Strand: Direct
Name: 119357983
Synonym: Cpha266_2202
Alternate gene names: NA
Gene position: 2532329-2532886 (Clockwise)
Preceding gene: 119357978
Following gene: 119357984
Centisome position: 80.8
GC content: 44.8
Gene sequence:
>558_bases ATGACTAAAGAACAGATTCAATCGTCCAAACCTGTTGATAAAAGCTTGGGTATCGTGCTTGCTGCTGTAACCACAGTAAA AGCCAAGTATATCGAGGATGCAAATTACTACCTCAGGGAATCTGGCACCAAAGAGGAACAACGCATTGATGCATTTGAAG GCTCGCTTTTCGGAAAGCACGATGATTATCCTGAAGACAAATCGCGAGATGGAAGCCTCATTGCCTTACCACTCAAACCC GGTAGCTATGAGCTCTGCAATTGGGGGCTCTATATTGCCACCGGTGTCAGTTTTACAGATATACATCCAGCCAAACCGCC TGTACCGCTCAAATTCACGATAAGTCCGGGTGAAATCACCTACATCGGAGACCTGCATATTGAACCGATAATGGGAAAAA ATCTCTTAGGGATATCAATTCCTGGTGGGGGAAATCCTGGTATCTCCGACAACAGCGCTGTCGATCTGCAATTGCTCAGG AAAAAATATCCGAACTTGCAGGATTGGCCTGTGCGTACCAATATTATAGATGGACAAGCATGGGATATAATACATTGA
Upstream 100 bases:
>100_bases CCATTACAGACTCTTACCGTTACCAACACCCCAAATAATCATGAAAAAAGTCCTCTGTTTGTTTTTTATACCCCTCATCA CTATCGTGACAGGTTGCTCC
Downstream 100 bases:
>100_bases GGCTATCGTAACAAATTCATTGGACGAGATGAACATAGTAGCCTGTTCGGAAAATCTCGGGATGCACCCGCAATCATAAT GTTACGCACGATCAGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTKEQIQSSKPVDKSLGIVLAAVTTVKAKYIEDANYYLRESGTKEEQRIDAFEGSLFGKHDDYPEDKSRDGSLIALPLKP GSYELCNWGLYIATGVSFTDIHPAKPPVPLKFTISPGEITYIGDLHIEPIMGKNLLGISIPGGGNPGISDNSAVDLQLLR KKYPNLQDWPVRTNIIDGQAWDIIH
Sequences:
>Translated_185_residues MTKEQIQSSKPVDKSLGIVLAAVTTVKAKYIEDANYYLRESGTKEEQRIDAFEGSLFGKHDDYPEDKSRDGSLIALPLKP GSYELCNWGLYIATGVSFTDIHPAKPPVPLKFTISPGEITYIGDLHIEPIMGKNLLGISIPGGGNPGISDNSAVDLQLLR KKYPNLQDWPVRTNIIDGQAWDIIH >Mature_184_residues TKEQIQSSKPVDKSLGIVLAAVTTVKAKYIEDANYYLRESGTKEEQRIDAFEGSLFGKHDDYPEDKSRDGSLIALPLKPG SYELCNWGLYIATGVSFTDIHPAKPPVPLKFTISPGEITYIGDLHIEPIMGKNLLGISIPGGGNPGISDNSAVDLQLLRK KYPNLQDWPVRTNIIDGQAWDIIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20379; Mature: 20248
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEQIQSSKPVDKSLGIVLAAVTTVKAKYIEDANYYLRESGTKEEQRIDAFEGSLFGKH CCHHHHHCCCCCCHHHCEEEEHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCC DDYPEDKSRDGSLIALPLKPGSYELCNWGLYIATGVSFTDIHPAKPPVPLKFTISPGEIT CCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEECCEEECCCCCCCCCCEEEEECCCCEE YIGDLHIEPIMGKNLLGISIPGGGNPGISDNSAVDLQLLRKKYPNLQDWPVRTNIIDGQA EEECEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCE WDIIH EECCC >Mature Secondary Structure TKEQIQSSKPVDKSLGIVLAAVTTVKAKYIEDANYYLRESGTKEEQRIDAFEGSLFGKH CHHHHHCCCCCCHHHCEEEEHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCC DDYPEDKSRDGSLIALPLKPGSYELCNWGLYIATGVSFTDIHPAKPPVPLKFTISPGEIT CCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEECCEEECCCCCCCCCCEEEEECCCCEE YIGDLHIEPIMGKNLLGISIPGGGNPGISDNSAVDLQLLRKKYPNLQDWPVRTNIIDGQA EEECEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCE WDIIH EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA