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The map label for this gene is ylbK [H]

Identifier: 119357942

GI number: 119357942

Start: 2498034

End: 2498807

Strand: Reverse

Name: ylbK [H]

Synonym: Cpha266_2157

Alternate gene names: 119357942

Gene position: 2498807-2498034 (Counterclockwise)

Preceding gene: 119357943

Following gene: 119357941

Centisome position: 79.73

GC content: 49.61

Gene sequence:

>774_bases
ATGACAAAAACCGGTCTTGCCCTTGGCGGTGGAGCGGTTCTCGGTGCTGCCCATATCGGGGTGCTTCAGGCAATCGATGA
GCTTGATATACGTGTCAGTTGTGTTACAGGTACCAGTATCGGCGCATTTGTTGCCTCACTCTATGCTTTCGGCAAGTCAT
GGCGGGAGATAAGGGCGATTGCTCTTGATCTTGGCTGGCTTGATCTTTCACGGCTTACTCTCTCTCAGTTTGGTCTGTTG
TCGAATAAAAAATTCGGGGGTATTGTTACCGAATTGCTCGGTAAAAAAAATATCGAAGATGCGCAAATACCGCTTGCGAT
GGTTGCGACCGATATCGGAACAGGCAAAAGAGTGCTGCTGAAAAAGGGTGATGTGGCATCTGCGGTTATGGCAAGCAGTT
GCATTCCGGGGGTGTTCATGCCGGTCAACTATCAGGGAATGATGCTTGTTGACGGTATGCTGGTTGAGAACGTGCCGGTA
ACGCCGTTGAGAGGGATGGGCGCTGAAAAGGTGATTGGCGTAGATCTTCTCGGCAATCATGTGTTTAAAAAGCCCGAAAA
TATCATCGGGGTTCTCTTGAACGCTTTTTACAGCACGATTACCAATACCACGGCAATGCAGCTTGAGGAAGCGGATCTTG
CTCTTGTTTTCGATCTTTCCGGGTTTGGCTTGATTGACACAGGCCAGATTGCGGATATTATGAAAGCAGGGTACAATGCG
GCACGGCCTGTTCTTGAAGCGTGGCAGTCGCAGGCAGGTCTGAAGGTGAAATGA

Upstream 100 bases:

>100_bases
GTTCAGTTTGCTGCAACGTCTGGTTTCTTTTTTTCGTTGATAGTACTGGTGTTGCAAGGGGATTCTGTGTTTTCCGATCA
TTTATTAAGGGGATTTCGCT

Downstream 100 bases:

>100_bases
TTTGATGTTTGTTGCTGAAATTGGTAAATTTTTCATAAAATGGCCGGTTTTTTTGAGTTATCCCCTTTGCCGGTACCAAT
AAAGGCTATGCCTTGGCCTG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTKTGLALGGGAVLGAAHIGVLQAIDELDIRVSCVTGTSIGAFVASLYAFGKSWREIRAIALDLGWLDLSRLTLSQFGLL
SNKKFGGIVTELLGKKNIEDAQIPLAMVATDIGTGKRVLLKKGDVASAVMASSCIPGVFMPVNYQGMMLVDGMLVENVPV
TPLRGMGAEKVIGVDLLGNHVFKKPENIIGVLLNAFYSTITNTTAMQLEEADLALVFDLSGFGLIDTGQIADIMKAGYNA
ARPVLEAWQSQAGLKVK

Sequences:

>Translated_257_residues
MTKTGLALGGGAVLGAAHIGVLQAIDELDIRVSCVTGTSIGAFVASLYAFGKSWREIRAIALDLGWLDLSRLTLSQFGLL
SNKKFGGIVTELLGKKNIEDAQIPLAMVATDIGTGKRVLLKKGDVASAVMASSCIPGVFMPVNYQGMMLVDGMLVENVPV
TPLRGMGAEKVIGVDLLGNHVFKKPENIIGVLLNAFYSTITNTTAMQLEEADLALVFDLSGFGLIDTGQIADIMKAGYNA
ARPVLEAWQSQAGLKVK
>Mature_256_residues
TKTGLALGGGAVLGAAHIGVLQAIDELDIRVSCVTGTSIGAFVASLYAFGKSWREIRAIALDLGWLDLSRLTLSQFGLLS
NKKFGGIVTELLGKKNIEDAQIPLAMVATDIGTGKRVLLKKGDVASAVMASSCIPGVFMPVNYQGMMLVDGMLVENVPVT
PLRGMGAEKVIGVDLLGNHVFKKPENIIGVLLNAFYSTITNTTAMQLEEADLALVFDLSGFGLIDTGQIADIMKAGYNAA
RPVLEAWQSQAGLKVK

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=185, Percent_Identity=33.5135135135135, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI116256487, Length=185, Percent_Identity=33.5135135135135, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI260656039, Length=185, Percent_Identity=33.5135135135135, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI260656043, Length=185, Percent_Identity=33.5135135135135, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI260656037, Length=185, Percent_Identity=33.5135135135135, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI148727290, Length=278, Percent_Identity=27.6978417266187, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI148727335, Length=278, Percent_Identity=27.6978417266187, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI226510936, Length=186, Percent_Identity=34.4086021505376, Blast_Score=107, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI193204778, Length=167, Percent_Identity=31.7365269461078, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71997299, Length=164, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71997289, Length=164, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=178, Percent_Identity=32.5842696629214, Blast_Score=89, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281376913, Length=180, Percent_Identity=33.8888888888889, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571388, Length=180, Percent_Identity=31.6666666666667, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 27111; Mature: 26980

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTGLALGGGAVLGAAHIGVLQAIDELDIRVSCVTGTSIGAFVASLYAFGKSWREIRAI
CCCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
ALDLGWLDLSRLTLSQFGLLSNKKFGGIVTELLGKKNIEDAQIPLAMVATDIGTGKRVLL
HHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHEEECCCCCCEEEE
KKGDVASAVMASSCIPGVFMPVNYQGMMLVDGMLVENVPVTPLRGMGAEKVIGVDLLGNH
ECCCHHHHHHHHHCCCCEEECCCCCCEEEECCEEECCCCCCCCCCCCCCCEEEHHHHCCH
VFKKPENIIGVLLNAFYSTITNTTAMQLEEADLALVFDLSGFGLIDTGQIADIMKAGYNA
HHCCHHHHHHHHHHHHHHHHCCCHHEEEECCCEEEEEECCCCCEECCCHHHHHHHCCCHH
ARPVLEAWQSQAGLKVK
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKTGLALGGGAVLGAAHIGVLQAIDELDIRVSCVTGTSIGAFVASLYAFGKSWREIRAI
CCCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
ALDLGWLDLSRLTLSQFGLLSNKKFGGIVTELLGKKNIEDAQIPLAMVATDIGTGKRVLL
HHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHEEECCCCCCEEEE
KKGDVASAVMASSCIPGVFMPVNYQGMMLVDGMLVENVPVTPLRGMGAEKVIGVDLLGNH
ECCCHHHHHHHHHCCCCEEECCCCCCEEEECCEEECCCCCCCCCCCCCCCEEEHHHHCCH
VFKKPENIIGVLLNAFYSTITNTTAMQLEEADLALVFDLSGFGLIDTGQIADIMKAGYNA
HHCCHHHHHHHHHHHHHHHHCCCHHEEEECCCEEEEEECCCCCEECCCHHHHHHHCCCHH
ARPVLEAWQSQAGLKVK
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]