| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357939
Identifier: 119357939
GI number: 119357939
Start: 2495266
End: 2495985
Strand: Reverse
Name: 119357939
Synonym: Cpha266_2154
Alternate gene names: NA
Gene position: 2495985-2495266 (Counterclockwise)
Preceding gene: 119357940
Following gene: 119357938
Centisome position: 79.64
GC content: 47.36
Gene sequence:
>720_bases ATGAATAATAAACGGAACACGGAGGCATTTATTCTCGGTGCTTTGCTTTGTGCCGGGCTTGTTATTATGGGATACCTGCT TTCGGCAGGCATTACAAAATTCAAGGCGCTTGAAAGAACGGTTTCCGTCAAGGGGCTTTCGGAACGGGAAGCTCCTGCTG ATATTGCCATATGGCCGATCAAGTTTGAGGTGGCTGCCGATGATCTTTCTTCGCTGGTGACGGCCATTGAAGAAAAAAAC AAGGTTGTGCTCGATTTTCTCGCGGCAAACGGGTTCACTGCCAGGGATATTTCTGTCTCAGCTCCCGCAATCATTGACCG GCAGGCTCAGGGCTATGGCGATGCAAACCGATTTACGTTCAGATATGCCGGCAGTTCAACGGTAAGCGTCTATACAAGGG ATGTCGAAAGGGTGAGAAGTACCGTCAGAAAGATGGTGGATTTGGGAAAAATGGGCGTTGCCGTATCAGGAGAGAGTTAT GAGGCGAAAACCGAATTTATTTTTTCCGGTCTGAACGCACTTAAGCCTGTTATGATTGAAGAGGCAACAAATAATGCAAG GGCTGTCGCTGAAAAATTTGCATCCGACTCAAAAAGCAGACTTGGTAAAATAAAATCGGCGAGTCAGGGTCAGTTCACCA TTGAAAACCGCGACAGCAATACGCCCTATATCAAGAAGGTGCGGGTCGTTTCCACTCTTGAGTATTATCTCGCCGATTGA
Upstream 100 bases:
>100_bases TTTTATTGATATTTGATTGTCACGATATAATGCATGTATTATGTTTATAATGCAGGTGTGTTGTAGCGTCGTCAGACTAA ACGTATAATCCGATAGACCC
Downstream 100 bases:
>100_bases TCTGTTTATGATTTTTTATGCATAGGGTAAAGGCTGTATGAGCGCCCGCAGTGCAAGGCTGAAGGTGTCCCGATAAATCG GGATAGATTTCGAAACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNNKRNTEAFILGALLCAGLVIMGYLLSAGITKFKALERTVSVKGLSEREAPADIAIWPIKFEVAADDLSSLVTAIEEKN KVVLDFLAANGFTARDISVSAPAIIDRQAQGYGDANRFTFRYAGSSTVSVYTRDVERVRSTVRKMVDLGKMGVAVSGESY EAKTEFIFSGLNALKPVMIEEATNNARAVAEKFASDSKSRLGKIKSASQGQFTIENRDSNTPYIKKVRVVSTLEYYLAD
Sequences:
>Translated_239_residues MNNKRNTEAFILGALLCAGLVIMGYLLSAGITKFKALERTVSVKGLSEREAPADIAIWPIKFEVAADDLSSLVTAIEEKN KVVLDFLAANGFTARDISVSAPAIIDRQAQGYGDANRFTFRYAGSSTVSVYTRDVERVRSTVRKMVDLGKMGVAVSGESY EAKTEFIFSGLNALKPVMIEEATNNARAVAEKFASDSKSRLGKIKSASQGQFTIENRDSNTPYIKKVRVVSTLEYYLAD >Mature_239_residues MNNKRNTEAFILGALLCAGLVIMGYLLSAGITKFKALERTVSVKGLSEREAPADIAIWPIKFEVAADDLSSLVTAIEEKN KVVLDFLAANGFTARDISVSAPAIIDRQAQGYGDANRFTFRYAGSSTVSVYTRDVERVRSTVRKMVDLGKMGVAVSGESY EAKTEFIFSGLNALKPVMIEEATNNARAVAEKFASDSKSRLGKIKSASQGQFTIENRDSNTPYIKKVRVVSTLEYYLAD
Specific function: Unknown
COG id: COG2859
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26087; Mature: 26087
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKRNTEAFILGALLCAGLVIMGYLLSAGITKFKALERTVSVKGLSEREAPADIAIWPI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE KFEVAADDLSSLVTAIEEKNKVVLDFLAANGFTARDISVSAPAIIDRQAQGYGDANRFTF EEEECHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCCCCHHCCCCCCCCCCCCCEEE RYAGSSTVSVYTRDVERVRSTVRKMVDLGKMGVAVSGESYEAKTEFIFSGLNALKPVMIE EECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCHHHH EATNNARAVAEKFASDSKSRLGKIKSASQGQFTIENRDSNTPYIKKVRVVSTLEYYLAD HCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNKRNTEAFILGALLCAGLVIMGYLLSAGITKFKALERTVSVKGLSEREAPADIAIWPI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE KFEVAADDLSSLVTAIEEKNKVVLDFLAANGFTARDISVSAPAIIDRQAQGYGDANRFTF EEEECHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCCCCHHCCCCCCCCCCCCCEEE RYAGSSTVSVYTRDVERVRSTVRKMVDLGKMGVAVSGESYEAKTEFIFSGLNALKPVMIE EECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCHHHH EATNNARAVAEKFASDSKSRLGKIKSASQGQFTIENRDSNTPYIKKVRVVSTLEYYLAD HCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA