| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357907
Identifier: 119357907
GI number: 119357907
Start: 2452599
End: 2453885
Strand: Direct
Name: 119357907
Synonym: Cpha266_2115
Alternate gene names: NA
Gene position: 2452599-2453885 (Clockwise)
Preceding gene: 119357903
Following gene: 119357913
Centisome position: 78.26
GC content: 48.17
Gene sequence:
>1287_bases ATGAAGAAAGAAACATTAAAAACGATCATCAGGGACTTCCATGTCTCTCCGCTGCCGACCCTGAAAAGACGGTCTCAGCA GATACCTGTAGATACGAGCAAGATCATAACGCTGGTGGGAGTACGCCGCAGTGGCAAAACCTCTCTGCTGTTCAACATCA TCAGCGACCTTCTGCAAAAGGGAATACCGATAACCACGGTACTCTATATCAACTTCGAAGATGAGCGTCTCGATCTGAAA ACAGAGGAACTCGATCTCCTGTTACAGGCATGGCAGGAACTCTATCCGGAGATGCGCATTGAAGAATGCTCCTTTTTTTT CGATGAAATCCAGAATATTGCGGGCTGGGACAAGTTTGTGAGGCGGATATACGACCGAGGAACGAGAAATATCTTCATCA CCGGGTCAAACGCCCGTTTTTTAAGCAGCGACATTGCCACTACGCTGCGAGGCAGAACCATCAGCTTTGAGGTATTCCCA CTCTCCTTCAGCGAGTACCTTGCCTTCAGGGAGGTAACACCAGACCTGAACAGCTCACACTCCGTTGCCCTTATAAACCA CCATCTTCAGCACTACCTCGACCGTGGGGGCTTTCCGGAGGTGATCGGATATGATGATGCGTTGCGCAACCGGGTATTGC AGGAATATTTCAATGTCATGATCTACCGTGACCTGGTTGAACGCTATGAAATCAAGAATCTCCCTGCGCTGAAATTCTTT CTGAAGAGAATCGTTTCATCCGCAACAAAGCAATTTTCGGTCAACAAAATCTACAACGAGCTGAAATCTTCCGGCTTCAG GATCGGCAAGAACCAACTGTACGACTTCCTTGAAGGCGCTGTCAACATCTACCTCGCGCAGACACTCAGAAAGCACTCCG ACTCACTTGTAGACAGGGAGCTTGGCGAAAAAAAAGTCTATGTGATCGATACTGGTCTCCTGAACGCTCTTGATTTCAGA TTTTCGGATGATACGGGCAAAGCTCTGGAACAGGCCGTTTTTCTGGAACTCCGGCGTAGAGAAAAAGAGATATACTTTTT CAGGGAGAAAGCAGAGTGCGACTTCATCGTCAAGCAGGGAACCGTCATAACTGAAGCCATTCAGGTTTCAACCACCATCA CCGATACGCAAACACGTTCACGAGAGCTGAGGGGGCTGACGGAATGCTGCACCAGATTCGGTTTGCAGCATGGAGTAATC ATCACTCTCGACGCATCGGAGAAATTTGAATATAACGGCATAGCGGTTACAGTCACACCTCTCTATCGATGGCTTCTGAT GCCATAA
Upstream 100 bases:
>100_bases TTCCGATTTGAGTCCGAAAAAAAAAAGAACTTCCGAACTCGATTATCGCAGTAATAATCTTCCTTGCTGTAAGGAAATAT TCTCGTAAATTGTCCTTATC
Downstream 100 bases:
>100_bases GCGGCTTGTTCACCAATCCATATTGGATGTGCATACCGCAAGTTTCAGTTTATTTGCATCATAATAAGGAGCTTCCCATA AAATATTGAGCAACTACATG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MKKETLKTIIRDFHVSPLPTLKRRSQQIPVDTSKIITLVGVRRSGKTSLLFNIISDLLQKGIPITTVLYINFEDERLDLK TEELDLLLQAWQELYPEMRIEECSFFFDEIQNIAGWDKFVRRIYDRGTRNIFITGSNARFLSSDIATTLRGRTISFEVFP LSFSEYLAFREVTPDLNSSHSVALINHHLQHYLDRGGFPEVIGYDDALRNRVLQEYFNVMIYRDLVERYEIKNLPALKFF LKRIVSSATKQFSVNKIYNELKSSGFRIGKNQLYDFLEGAVNIYLAQTLRKHSDSLVDRELGEKKVYVIDTGLLNALDFR FSDDTGKALEQAVFLELRRREKEIYFFREKAECDFIVKQGTVITEAIQVSTTITDTQTRSRELRGLTECCTRFGLQHGVI ITLDASEKFEYNGIAVTVTPLYRWLLMP
Sequences:
>Translated_428_residues MKKETLKTIIRDFHVSPLPTLKRRSQQIPVDTSKIITLVGVRRSGKTSLLFNIISDLLQKGIPITTVLYINFEDERLDLK TEELDLLLQAWQELYPEMRIEECSFFFDEIQNIAGWDKFVRRIYDRGTRNIFITGSNARFLSSDIATTLRGRTISFEVFP LSFSEYLAFREVTPDLNSSHSVALINHHLQHYLDRGGFPEVIGYDDALRNRVLQEYFNVMIYRDLVERYEIKNLPALKFF LKRIVSSATKQFSVNKIYNELKSSGFRIGKNQLYDFLEGAVNIYLAQTLRKHSDSLVDRELGEKKVYVIDTGLLNALDFR FSDDTGKALEQAVFLELRRREKEIYFFREKAECDFIVKQGTVITEAIQVSTTITDTQTRSRELRGLTECCTRFGLQHGVI ITLDASEKFEYNGIAVTVTPLYRWLLMP >Mature_428_residues MKKETLKTIIRDFHVSPLPTLKRRSQQIPVDTSKIITLVGVRRSGKTSLLFNIISDLLQKGIPITTVLYINFEDERLDLK TEELDLLLQAWQELYPEMRIEECSFFFDEIQNIAGWDKFVRRIYDRGTRNIFITGSNARFLSSDIATTLRGRTISFEVFP LSFSEYLAFREVTPDLNSSHSVALINHHLQHYLDRGGFPEVIGYDDALRNRVLQEYFNVMIYRDLVERYEIKNLPALKFF LKRIVSSATKQFSVNKIYNELKSSGFRIGKNQLYDFLEGAVNIYLAQTLRKHSDSLVDRELGEKKVYVIDTGLLNALDFR FSDDTGKALEQAVFLELRRREKEIYFFREKAECDFIVKQGTVITEAIQVSTTITDTQTRSRELRGLTECCTRFGLQHGVI ITLDASEKFEYNGIAVTVTPLYRWLLMP
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49705; Mature: 49705
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKETLKTIIRDFHVSPLPTLKRRSQQIPVDTSKIITLVGVRRSGKTSLLFNIISDLLQK CCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHC GIPITTVLYINFEDERLDLKTEELDLLLQAWQELYPEMRIEECSFFFDEIQNIAGWDKFV CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHH RRIYDRGTRNIFITGSNARFLSSDIATTLRGRTISFEVFPLSFSEYLAFREVTPDLNSSH HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCCCCCCC SVALINHHLQHYLDRGGFPEVIGYDDALRNRVLQEYFNVMIYRDLVERYEIKNLPALKFF CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LKRIVSSATKQFSVNKIYNELKSSGFRIGKNQLYDFLEGAVNIYLAQTLRKHSDSLVDRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEKKVYVIDTGLLNALDFRFSDDTGKALEQAVFLELRRREKEIYFFREKAECDFIVKQG CCCCEEEEEECCHHHHHCCEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECC TVITEAIQVSTTITDTQTRSRELRGLTECCTRFGLQHGVIITLDASEKFEYNGIAVTVTP CEEEHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEHHH LYRWLLMP HHHHHCCC >Mature Secondary Structure MKKETLKTIIRDFHVSPLPTLKRRSQQIPVDTSKIITLVGVRRSGKTSLLFNIISDLLQK CCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHC GIPITTVLYINFEDERLDLKTEELDLLLQAWQELYPEMRIEECSFFFDEIQNIAGWDKFV CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHH RRIYDRGTRNIFITGSNARFLSSDIATTLRGRTISFEVFPLSFSEYLAFREVTPDLNSSH HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCCCCCCC SVALINHHLQHYLDRGGFPEVIGYDDALRNRVLQEYFNVMIYRDLVERYEIKNLPALKFF CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LKRIVSSATKQFSVNKIYNELKSSGFRIGKNQLYDFLEGAVNIYLAQTLRKHSDSLVDRE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEKKVYVIDTGLLNALDFRFSDDTGKALEQAVFLELRRREKEIYFFREKAECDFIVKQG CCCCEEEEEECCHHHHHCCEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECC TVITEAIQVSTTITDTQTRSRELRGLTECCTRFGLQHGVIITLDASEKFEYNGIAVTVTP CEEEHHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEHHH LYRWLLMP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]