Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 119357888

GI number: 119357888

Start: 2429408

End: 2430298

Strand: Reverse

Name: parB [H]

Synonym: Cpha266_2096

Alternate gene names: 119357888

Gene position: 2430298-2429408 (Counterclockwise)

Preceding gene: 119357889

Following gene: 119357887

Centisome position: 77.55

GC content: 49.72

Gene sequence:

>891_bases
ATGGCCATGTTAAAAAAAGCATTGGGAAAAGGTCTTAAAGCCCTTATTCCGGATGAGGGTTTTTCGTCGGATCCAAAGCA
GGAAGTCCATGAGCCTCTTCTTGACGGAGTAGTAGGGAGTCTTCCGGTCGAGAAAATCCGCGCCAATCCCTTTCAGCCCA
GAAAGACATTTGACGAAACCGCACTTGAAGAGCTGAAAAATTCCATTATAGAAAACGGAGTGATTCAGCCGGTGACGGTC
TGCCGCGATGGCGAAGGGTATCAGCTTATCAGCGGCGAACGACGGTTGCGGGCGGTGACGCAGGCTGGCTTCAAATTTAT
TCCGGCTTATATTATCGATGCACACGAAGATTCAAGCAAGCTTGAACTTGCCCTTATCGAAAACATTCAGCGTGAAGATC
TCAATGCCATCGAAGTCGCTCTTGCCCTGAAAAGTCTTACGACCAAATGCAGCCTCACGCAGGACGAGATCGCCCAGAAA
GTCGGCAAGAACCGTTCTACGGTGAGTAATTTTCTTAGGCTTCTGAAGCTTCCGATGGCGATTCAGGACAGTATCCGGAA
CAGGGAGATCTCCTCCGGTCATGCTCGGGCACTCATCAATCTTCCCGGTGAACAGCAGCAGTTGAAAGTATGGAAGCAGA
TTCTTGCCCGCCAGCTATCCGTTCGTCAGACAGAGGCGCTGGTCAACGGCATGTTCCGCGATCAGGAAAAACAGGTGCCG
GGAAAGCCGGAAGATCGCTCTCCCCAGCTTGGCCTGATTGAAACAAGACTGAGAGACCGGTTTGCCACGAAAGTGAAAAT
TATAGAAAAAAGAGCAGGGAAGGGCGAAATCCATATTCAGTATTTTTCGCCGGACGATCTGGAGAGAATTCTTGATATTG
TAGGCGATTAG

Upstream 100 bases:

>100_bases
GACTATCTTGATCTTGCCATGGAGATTTTCGAAAGGGATGGCAACATAAAAAAATTTAAAGTTACTCAGCAATAGCTGAT
CACGAAATGGGTAGGGTGAC

Downstream 100 bases:

>100_bases
CTGCTGACGCCTCCTGCAGAGTAAAAAAAAAGAGGCAACGGCGCCGCTGTTTACGGTTGCAAGCAGATTGCCCGAAAGCC
GGGATCCGTTGCTGATACAG

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MAMLKKALGKGLKALIPDEGFSSDPKQEVHEPLLDGVVGSLPVEKIRANPFQPRKTFDETALEELKNSIIENGVIQPVTV
CRDGEGYQLISGERRLRAVTQAGFKFIPAYIIDAHEDSSKLELALIENIQREDLNAIEVALALKSLTTKCSLTQDEIAQK
VGKNRSTVSNFLRLLKLPMAIQDSIRNREISSGHARALINLPGEQQQLKVWKQILARQLSVRQTEALVNGMFRDQEKQVP
GKPEDRSPQLGLIETRLRDRFATKVKIIEKRAGKGEIHIQYFSPDDLERILDIVGD

Sequences:

>Translated_296_residues
MAMLKKALGKGLKALIPDEGFSSDPKQEVHEPLLDGVVGSLPVEKIRANPFQPRKTFDETALEELKNSIIENGVIQPVTV
CRDGEGYQLISGERRLRAVTQAGFKFIPAYIIDAHEDSSKLELALIENIQREDLNAIEVALALKSLTTKCSLTQDEIAQK
VGKNRSTVSNFLRLLKLPMAIQDSIRNREISSGHARALINLPGEQQQLKVWKQILARQLSVRQTEALVNGMFRDQEKQVP
GKPEDRSPQLGLIETRLRDRFATKVKIIEKRAGKGEIHIQYFSPDDLERILDIVGD
>Mature_295_residues
AMLKKALGKGLKALIPDEGFSSDPKQEVHEPLLDGVVGSLPVEKIRANPFQPRKTFDETALEELKNSIIENGVIQPVTVC
RDGEGYQLISGERRLRAVTQAGFKFIPAYIIDAHEDSSKLELALIENIQREDLNAIEVALALKSLTTKCSLTQDEIAQKV
GKNRSTVSNFLRLLKLPMAIQDSIRNREISSGHARALINLPGEQQQLKVWKQILARQLSVRQTEALVNGMFRDQEKQVPG
KPEDRSPQLGLIETRLRDRFATKVKIIEKRAGKGEIHIQYFSPDDLERILDIVGD

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33177; Mature: 33046

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLKKALGKGLKALIPDEGFSSDPKQEVHEPLLDGVVGSLPVEKIRANPFQPRKTFDET
CHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH
ALEELKNSIIENGVIQPVTVCRDGEGYQLISGERRLRAVTQAGFKFIPAYIIDAHEDSSK
HHHHHHHHHHHCCCCCCHHEEECCCCCEEECCHHHHHHHHHHHHHHHHHHEEECCCCCCH
LELALIENIQREDLNAIEVALALKSLTTKCSLTQDEIAQKVGKNRSTVSNFLRLLKLPMA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHH
IQDSIRNREISSGHARALINLPGEQQQLKVWKQILARQLSVRQTEALVNGMFRDQEKQVP
HHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKPEDRSPQLGLIETRLRDRFATKVKIIEKRAGKGEIHIQYFSPDDLERILDIVGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
AMLKKALGKGLKALIPDEGFSSDPKQEVHEPLLDGVVGSLPVEKIRANPFQPRKTFDET
HHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH
ALEELKNSIIENGVIQPVTVCRDGEGYQLISGERRLRAVTQAGFKFIPAYIIDAHEDSSK
HHHHHHHHHHHCCCCCCHHEEECCCCCEEECCHHHHHHHHHHHHHHHHHHEEECCCCCCH
LELALIENIQREDLNAIEVALALKSLTTKCSLTQDEIAQKVGKNRSTVSNFLRLLKLPMA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHH
IQDSIRNREISSGHARALINLPGEQQQLKVWKQILARQLSVRQTEALVNGMFRDQEKQVP
HHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKPEDRSPQLGLIETRLRDRFATKVKIIEKRAGKGEIHIQYFSPDDLERILDIVGD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]