| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357849
Identifier: 119357849
GI number: 119357849
Start: 2384904
End: 2385551
Strand: Reverse
Name: 119357849
Synonym: Cpha266_2057
Alternate gene names: NA
Gene position: 2385551-2384904 (Counterclockwise)
Preceding gene: 119357850
Following gene: 119357848
Centisome position: 76.12
GC content: 47.53
Gene sequence:
>648_bases ATGCTGCCCCCGTCTCAGCTTCGGTTATGGCCCGAGCTTGATGCTACGCCTGAGACATTTACACTCTATGGAGGAACTGC CTTAGCGTTGCGTTTTGGTCATCGGGTTTCAGTTGATTTTGATTTTTTCTCAAACAAGCCGTTTGATCCGGATGAGTTGG TCGATACGCTTTTCTATCTCAAAGGGGCCGAGCGTCTACAGGTTGGCCCTAATACGCTGACTTGCCGGGTAGATCGTGGC GGCCCTGTTTTACTCTCTTTTTTTGGAGGCTTGGGTCTTGGGCAGGTAGAAGCTCCTGATCAGGCTCAGGGAAGCACTCT TTTTGTCGCGTCGTTATTGGATATTGCAGGAACGAAAGCAGCTGTGGTGCAAAAAAGGGCAGAGGTAAAAGATTATCTCG ATATGGACGCACTGTTGCAGCACGGTATCGATTTGCCGACGGTTTTAGCAGCAGGTCAGGTGATTTATGGGTGTAGTTTC AACCCCATGATAACCTTGAAGGCGCTCTCTTTTTTTGATGATATACCCGCATTGCCCACCGATATCCGAGATCGTTTATG TCATGCCGTTGATTCTGTCGATCCGATAAATTTGCCTGTTTTAAAACCTTATGCTGAACGAAAGATCGAAAACGGATACA ACTCATGA
Upstream 100 bases:
>100_bases TGTTTCTTCAGATATATTTTTATAAAATACAATGCAGTGTCTTGTTCAGTAAAGCGCATTAACAGGGAGGGCTTATATTA TTTTTACACCTGTTCTCTCC
Downstream 100 bases:
>100_bases AAACTTTGCCCGTTACCCCGGAAATGCTGCAGGTGGCTCGTCGAGTTGTATGGTTCAGGGAGCCGGAAGATGAGCTTGCG GACCCGGTGCATTTTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLPPSQLRLWPELDATPETFTLYGGTALALRFGHRVSVDFDFFSNKPFDPDELVDTLFYLKGAERLQVGPNTLTCRVDRG GPVLLSFFGGLGLGQVEAPDQAQGSTLFVASLLDIAGTKAAVVQKRAEVKDYLDMDALLQHGIDLPTVLAAGQVIYGCSF NPMITLKALSFFDDIPALPTDIRDRLCHAVDSVDPINLPVLKPYAERKIENGYNS
Sequences:
>Translated_215_residues MLPPSQLRLWPELDATPETFTLYGGTALALRFGHRVSVDFDFFSNKPFDPDELVDTLFYLKGAERLQVGPNTLTCRVDRG GPVLLSFFGGLGLGQVEAPDQAQGSTLFVASLLDIAGTKAAVVQKRAEVKDYLDMDALLQHGIDLPTVLAAGQVIYGCSF NPMITLKALSFFDDIPALPTDIRDRLCHAVDSVDPINLPVLKPYAERKIENGYNS >Mature_215_residues MLPPSQLRLWPELDATPETFTLYGGTALALRFGHRVSVDFDFFSNKPFDPDELVDTLFYLKGAERLQVGPNTLTCRVDRG GPVLLSFFGGLGLGQVEAPDQAQGSTLFVASLLDIAGTKAAVVQKRAEVKDYLDMDALLQHGIDLPTVLAAGQVIYGCSF NPMITLKALSFFDDIPALPTDIRDRLCHAVDSVDPINLPVLKPYAERKIENGYNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23501; Mature: 23501
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPSQLRLWPELDATPETFTLYGGTALALRFGHRVSVDFDFFSNKPFDPDELVDTLFYL CCCCCCEEECCCCCCCCCEEEEECCEEEEEEECCEEEEEEHHCCCCCCCHHHHHHHHHHH KGAERLQVGPNTLTCRVDRGGPVLLSFFGGLGLGQVEAPDQAQGSTLFVASLLDIAGTKA CCCCEEEECCCEEEEEECCCCCEEEEHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHH AVVQKRAEVKDYLDMDALLQHGIDLPTVLAAGQVIYGCSFNPMITLKALSFFDDIPALPT HHHHHHHHHHHHHCHHHHHHCCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHCCCCCCH DIRDRLCHAVDSVDPINLPVLKPYAERKIENGYNS HHHHHHHHHHCCCCCCCCCEECHHHHHHHHCCCCC >Mature Secondary Structure MLPPSQLRLWPELDATPETFTLYGGTALALRFGHRVSVDFDFFSNKPFDPDELVDTLFYL CCCCCCEEECCCCCCCCCEEEEECCEEEEEEECCEEEEEEHHCCCCCCCHHHHHHHHHHH KGAERLQVGPNTLTCRVDRGGPVLLSFFGGLGLGQVEAPDQAQGSTLFVASLLDIAGTKA CCCCEEEECCCEEEEEECCCCCEEEEHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCHH AVVQKRAEVKDYLDMDALLQHGIDLPTVLAAGQVIYGCSFNPMITLKALSFFDDIPALPT HHHHHHHHHHHHHCHHHHHHCCCCCHHHHHCCCEEECCCCCCEEHHHHHHHHHCCCCCCH DIRDRLCHAVDSVDPINLPVLKPYAERKIENGYNS HHHHHHHHHHCCCCCCCCCEECHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA