| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357843
Identifier: 119357843
GI number: 119357843
Start: 2374660
End: 2375253
Strand: Reverse
Name: 119357843
Synonym: Cpha266_2051
Alternate gene names: NA
Gene position: 2375253-2374660 (Counterclockwise)
Preceding gene: 119357844
Following gene: 119357842
Centisome position: 75.79
GC content: 39.9
Gene sequence:
>594_bases ATGCCCCTGCCCGATGACAAATCTTTTTCTCAGCTAAAAAAATCAGAGTTCCACCTCTGGTTTAAAAAAGCAGAAAAAGC AGTAAAAGAAGTTGAATACATCCATGCTGAGTTGACCATGCCTGCTGTTAATGAGTTGCGGTATGCAGGTTATCATGTAT CCAATTATCTGGAAGATACTGAACTTCTTGATGAGCTGAACCGAGCAGTCGGTCATTGCAAACGGGCGATTTATGATGCC TATGAAGCCAGTATCCTGTACAATATCAAGGAGTTTCGTGCCTTCAAGAATGACTATGGAACAGTTGTTATTTCTGAAGT ACTGGCCGACTATAGTGATCTGCATTACCGGGTTACAAATATATTGGAGTTTTTGCGCTCTATTGATAAAGAGACCAAAG ATCAACATTATGCCGCATGCAAAGAGCATCACCAAGAGTTAAAAGATATCATTATTAAACTCGATTCAGCCAGAGATGAG TTGAATAAAAAGATCCGAATTGAGCGGAAAAAATCTTTTTTTGCGATTGCCGGTATAGCTCTTGCTGTATTGTCGGCAGT TATAGCTTTTCTTGCGTATCTTGGTTGCCATTGA
Upstream 100 bases:
>100_bases ATCGAATGGTAATGTACTTTTACAGCTTGGCCATTACCTTACTGAGGAGGAAATTGATCGGCTGAAAAAAGACCTTGCCA TTTAAAGCTGTTCTGAGCCA
Downstream 100 bases:
>100_bases TTGAGCCTTAACCTCGATACCCCTATCCCACTCGATAATAACGGTCGAATGCTTCTGCAAGCGTTACCTTTTTTCCTTTT TGATCTTGTCTTTTGTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPLPDDKSFSQLKKSEFHLWFKKAEKAVKEVEYIHAELTMPAVNELRYAGYHVSNYLEDTELLDELNRAVGHCKRAIYDA YEASILYNIKEFRAFKNDYGTVVISEVLADYSDLHYRVTNILEFLRSIDKETKDQHYAACKEHHQELKDIIIKLDSARDE LNKKIRIERKKSFFAIAGIALAVLSAVIAFLAYLGCH
Sequences:
>Translated_197_residues MPLPDDKSFSQLKKSEFHLWFKKAEKAVKEVEYIHAELTMPAVNELRYAGYHVSNYLEDTELLDELNRAVGHCKRAIYDA YEASILYNIKEFRAFKNDYGTVVISEVLADYSDLHYRVTNILEFLRSIDKETKDQHYAACKEHHQELKDIIIKLDSARDE LNKKIRIERKKSFFAIAGIALAVLSAVIAFLAYLGCH >Mature_196_residues PLPDDKSFSQLKKSEFHLWFKKAEKAVKEVEYIHAELTMPAVNELRYAGYHVSNYLEDTELLDELNRAVGHCKRAIYDAY EASILYNIKEFRAFKNDYGTVVISEVLADYSDLHYRVTNILEFLRSIDKETKDQHYAACKEHHQELKDIIIKLDSARDEL NKKIRIERKKSFFAIAGIALAVLSAVIAFLAYLGCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22834; Mature: 22703
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPDDKSFSQLKKSEFHLWFKKAEKAVKEVEYIHAELTMPAVNELRYAGYHVSNYLEDT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ELLDELNRAVGHCKRAIYDAYEASILYNIKEFRAFKNDYGTVVISEVLADYSDLHYRVTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ILEFLRSIDKETKDQHYAACKEHHQELKDIIIKLDSARDELNKKIRIERKKSFFAIAGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVLSAVIAFLAYLGCH HHHHHHHHHHHHHHCCC >Mature Secondary Structure PLPDDKSFSQLKKSEFHLWFKKAEKAVKEVEYIHAELTMPAVNELRYAGYHVSNYLEDT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ELLDELNRAVGHCKRAIYDAYEASILYNIKEFRAFKNDYGTVVISEVLADYSDLHYRVTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ILEFLRSIDKETKDQHYAACKEHHQELKDIIIKLDSARDELNKKIRIERKKSFFAIAGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVLSAVIAFLAYLGCH HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA