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The map label for this gene is 119357842

Identifier: 119357842

GI number: 119357842

Start: 2371523

End: 2373811

Strand: Reverse

Name: 119357842

Synonym: Cpha266_2050

Alternate gene names: NA

Gene position: 2373811-2371523 (Counterclockwise)

Preceding gene: 119357843

Following gene: 119357841

Centisome position: 75.75

GC content: 41.76

Gene sequence:

>2289_bases
ATGACAACGAGTATTACGGGAAATGATATCATCAAACTTGGTTTTGATCTTCTTCGAGAAGGCACTCTAAGTATTGTGGA
TATCGTTGATGCATTTAAACTTGCAGGCATTCAGTCAACTGAACTCAAACTCTCTTCGCTCAAATCTCCTTTTGGGGGTG
ACAGATTTTTTGAACCGAAACAGCTTTCTGCAACAGAAATTAACTATCCGGTTTATGACCGAGTTACCGATTTTTCAGAA
ATAATACCTCAAGATGACGATCAAGGCTTAACTGCGTTAGAACGTTTGGGATCGTTTGTGGCAACAGATGCCGATGAAAA
ATATTCCGTTTTTGACCTCTTTAAGACTGTTGCCGCCATTCAGGATTGTTTACGTAATCCTGAAGAGGATAAACCGTTTT
TGCTGGTAAGTGCAGATTTTTCCGGTATTCAGGATACGGTTTATACCATTTCCTCAAAAGGTGCTCTCAAGACGCTTCGT
GCCCGCTCTTTCATGCTTGAGTTGCTCACCGAGCATATCATCTACGAAATTTTATCAGAAGTTGAATCTGAACGATATGC
TGTTGTGTTCTCTGGTGGAGGCGGATTTGGCTTGCTTTTGCCAAACAGTGAAGAGTCCATCCGAACGATCAATGATTACC
GTACCCGGATCAACGAATGGGCATTTGATGAGTTTTCAGGTCGCTTTTTCATCGCAATGGACGCATTGCCTTTCGGGAGG
GAGGAACTTCTCTCCGGAATGAGTTTTCGAAATATCCGACAAACCCAGGCCGACAATCTCGATCGTCTGAAGAGGCGCAA
GTTTATCGATCAGTTTGAGCAACTGTTTACACCATCCATGCCAAAACAGTTGACGGTAAATACCGAATGCCAGATTACAC
GAAGGGACGATATGCCGGACGAGTTTATGTTTGATCTGGAAACCGAAACCCGTATGAGTTTGGTGCCGGCTAAAGAACGT
GAAGATGATAAATGGATATGGGTTTCTGAAAGCTGTTATCACCAGTTCTGGATTGGTGACAAGCTTGCAACCGCACAATC
TGTTGTTCGATCTCAAAAGACACCGGAAGGAAAGGAACCATATTTCAAATATCCGGATGCAACGTGGAGCAAAGAGAACA
AGAGTTGGGTCTATTATCAAATAGATGATCAACAAACAAAATCAGCAGATTGCTGGTTCATGAATGACTGGACAGCCGGA
CAGCCGATTTTGTATGCAAATTATGTGAGAAAGCATGGCGAGTTGTCAGAATATGCTAAAAAACTGGAAAACGAAAGCCT
GAAAGAGGAGAATCCTACAGCCAAGCCCAATCATACAGCAACATTTCAGGGACTTGCGGCAAGTTCTTGTGGAGCTGATC
TTATAGGCGCATTAAGGATGGATGTTGATGACATGGGTAACCTGTTCAGTAGCATAGGGTCACTCACCGAACTTTCTGCC
AAGTCGCGGATGCTTAATCTCTTCTTTAAAGTTTACCTCAATCAAATATGCGCTGCAAATTTAGGTGGCGGATTTTCTTA
CACGGACATTGCTAAGAAAAATTACTCGGTTAAAAACAGCCATGGTGATATAGGGAGGAATGTTTCGGTGATCTATGCTG
GAGGCGATGACCTATTTATTCTCGGTGCTTGGGACGAAACAACAGAACTCGCCTTTGACATTCAACGCTGCTTTTCTCTT
TTCACAGGAGAAACATTGAACAAAGAGAAAAAGACAGTTGTTGAAGGACTTGGAATTTCGGGAGGACTTACCTTGCACCA
GCCAAAATTTCCTCTGTACCAGATGGCCCAAAAATCAGGTGAAGCAGAACACGGGGCAAAAAATGATATAGAAATCCAGA
ATGCTGAGATAGAAAAAAACAGAATTTCTCTTTTCTTTGATGATTCAAAACGTCAATGCAGATTAAAAATCCAAGAGCCT
TATCGTTATATGCTTTCAATGAAATGGGATTTGAGCAGTGCTTTTCTACTTCCCTTGATGAAAACATATCGCGAATGCGG
AAATGTTGCATTCCAAGATGGACGAATGGTCTTGGAAATTGAAAAATTCAGCTATCAGACCATTGAAAAGTGGTTTGCTG
TCATTGAAAAATATCAGGAAAGCTCCATGCTCTATCTGCCAACGATGGCAAGAGTGATGAAGCAGGTTGAAGAGAATCCA
AGGATGGATGCTTCGTTGTTCAAAACATTGCTTGGCTTCCTTTATACAAATGATGAAAGTAAGAAAAACTGGATTTCACA
TTTACATGTAGCTCTGAATTGGCTCACATACCTAAGGAGGAAAAATTAA

Upstream 100 bases:

>100_bases
TCGGCCCCGTCCAGAGCTTCATAGCCCAGGATCACATGCCTCAAAGTTCTCGATGGAAGTCCAGTTTTATTCTCATCAAC
ACGAATTTTAATTGCGGCTG

Downstream 100 bases:

>100_bases
TGGGATATGATTTTACTGAAATATATCAAATAAATAAACAATTTGATGTTGATGTACATCAAATTGTTAGTAGGATTGAA
GGGTTTGGCAGTTTTAGTTC

Product: CRISPR-associated Csm1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 762; Mature: 761

Protein sequence:

>762_residues
MTTSITGNDIIKLGFDLLREGTLSIVDIVDAFKLAGIQSTELKLSSLKSPFGGDRFFEPKQLSATEINYPVYDRVTDFSE
IIPQDDDQGLTALERLGSFVATDADEKYSVFDLFKTVAAIQDCLRNPEEDKPFLLVSADFSGIQDTVYTISSKGALKTLR
ARSFMLELLTEHIIYEILSEVESERYAVVFSGGGGFGLLLPNSEESIRTINDYRTRINEWAFDEFSGRFFIAMDALPFGR
EELLSGMSFRNIRQTQADNLDRLKRRKFIDQFEQLFTPSMPKQLTVNTECQITRRDDMPDEFMFDLETETRMSLVPAKER
EDDKWIWVSESCYHQFWIGDKLATAQSVVRSQKTPEGKEPYFKYPDATWSKENKSWVYYQIDDQQTKSADCWFMNDWTAG
QPILYANYVRKHGELSEYAKKLENESLKEENPTAKPNHTATFQGLAASSCGADLIGALRMDVDDMGNLFSSIGSLTELSA
KSRMLNLFFKVYLNQICAANLGGGFSYTDIAKKNYSVKNSHGDIGRNVSVIYAGGDDLFILGAWDETTELAFDIQRCFSL
FTGETLNKEKKTVVEGLGISGGLTLHQPKFPLYQMAQKSGEAEHGAKNDIEIQNAEIEKNRISLFFDDSKRQCRLKIQEP
YRYMLSMKWDLSSAFLLPLMKTYRECGNVAFQDGRMVLEIEKFSYQTIEKWFAVIEKYQESSMLYLPTMARVMKQVEENP
RMDASLFKTLLGFLYTNDESKKNWISHLHVALNWLTYLRRKN

Sequences:

>Translated_762_residues
MTTSITGNDIIKLGFDLLREGTLSIVDIVDAFKLAGIQSTELKLSSLKSPFGGDRFFEPKQLSATEINYPVYDRVTDFSE
IIPQDDDQGLTALERLGSFVATDADEKYSVFDLFKTVAAIQDCLRNPEEDKPFLLVSADFSGIQDTVYTISSKGALKTLR
ARSFMLELLTEHIIYEILSEVESERYAVVFSGGGGFGLLLPNSEESIRTINDYRTRINEWAFDEFSGRFFIAMDALPFGR
EELLSGMSFRNIRQTQADNLDRLKRRKFIDQFEQLFTPSMPKQLTVNTECQITRRDDMPDEFMFDLETETRMSLVPAKER
EDDKWIWVSESCYHQFWIGDKLATAQSVVRSQKTPEGKEPYFKYPDATWSKENKSWVYYQIDDQQTKSADCWFMNDWTAG
QPILYANYVRKHGELSEYAKKLENESLKEENPTAKPNHTATFQGLAASSCGADLIGALRMDVDDMGNLFSSIGSLTELSA
KSRMLNLFFKVYLNQICAANLGGGFSYTDIAKKNYSVKNSHGDIGRNVSVIYAGGDDLFILGAWDETTELAFDIQRCFSL
FTGETLNKEKKTVVEGLGISGGLTLHQPKFPLYQMAQKSGEAEHGAKNDIEIQNAEIEKNRISLFFDDSKRQCRLKIQEP
YRYMLSMKWDLSSAFLLPLMKTYRECGNVAFQDGRMVLEIEKFSYQTIEKWFAVIEKYQESSMLYLPTMARVMKQVEENP
RMDASLFKTLLGFLYTNDESKKNWISHLHVALNWLTYLRRKN
>Mature_761_residues
TTSITGNDIIKLGFDLLREGTLSIVDIVDAFKLAGIQSTELKLSSLKSPFGGDRFFEPKQLSATEINYPVYDRVTDFSEI
IPQDDDQGLTALERLGSFVATDADEKYSVFDLFKTVAAIQDCLRNPEEDKPFLLVSADFSGIQDTVYTISSKGALKTLRA
RSFMLELLTEHIIYEILSEVESERYAVVFSGGGGFGLLLPNSEESIRTINDYRTRINEWAFDEFSGRFFIAMDALPFGRE
ELLSGMSFRNIRQTQADNLDRLKRRKFIDQFEQLFTPSMPKQLTVNTECQITRRDDMPDEFMFDLETETRMSLVPAKERE
DDKWIWVSESCYHQFWIGDKLATAQSVVRSQKTPEGKEPYFKYPDATWSKENKSWVYYQIDDQQTKSADCWFMNDWTAGQ
PILYANYVRKHGELSEYAKKLENESLKEENPTAKPNHTATFQGLAASSCGADLIGALRMDVDDMGNLFSSIGSLTELSAK
SRMLNLFFKVYLNQICAANLGGGFSYTDIAKKNYSVKNSHGDIGRNVSVIYAGGDDLFILGAWDETTELAFDIQRCFSLF
TGETLNKEKKTVVEGLGISGGLTLHQPKFPLYQMAQKSGEAEHGAKNDIEIQNAEIEKNRISLFFDDSKRQCRLKIQEPY
RYMLSMKWDLSSAFLLPLMKTYRECGNVAFQDGRMVLEIEKFSYQTIEKWFAVIEKYQESSMLYLPTMARVMKQVEENPR
MDASLFKTLLGFLYTNDESKKNWISHLHVALNWLTYLRRKN

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013408
- InterPro:   IPR000160 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87200; Mature: 87068

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSITGNDIIKLGFDLLREGTLSIVDIVDAFKLAGIQSTELKLSSLKSPFGGDRFFEPK
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC
QLSATEINYPVYDRVTDFSEIIPQDDDQGLTALERLGSFVATDADEKYSVFDLFKTVAAI
CCCCEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
QDCLRNPEEDKPFLLVSADFSGIQDTVYTISSKGALKTLRARSFMLELLTEHIIYEILSE
HHHHCCCCCCCCEEEEECCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VESERYAVVFSGGGGFGLLLPNSEESIRTINDYRTRINEWAFDEFSGRFFIAMDALPFGR
HCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH
EELLSGMSFRNIRQTQADNLDRLKRRKFIDQFEQLFTPSMPKQLTVNTECQITRRDDMPD
HHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCH
EFMFDLETETRMSLVPAKEREDDKWIWVSESCYHQFWIGDKLATAQSVVRSQKTPEGKEP
HHEEECCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
YFKYPDATWSKENKSWVYYQIDDQQTKSADCWFMNDWTAGQPILYANYVRKHGELSEYAK
CEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEHHHHHHCCCHHHHHH
KLENESLKEENPTAKPNHTATFQGLAASSCGADLIGALRMDVDDMGNLFSSIGSLTELSA
HHHCCCCCCCCCCCCCCCCEEECCCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KSRMLNLFFKVYLNQICAANLGGGFSYTDIAKKNYSVKNSHGDIGRNVSVIYAGGDDLFI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEE
LGAWDETTELAFDIQRCFSLFTGETLNKEKKTVVEGLGISGGLTLHQPKFPLYQMAQKSG
EECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCC
EAEHGAKNDIEIQNAEIEKNRISLFFDDSKRQCRLKIQEPYRYMLSMKWDLSSAFLLPLM
CCCCCCCCCCEEECCEECCCEEEEEECCCCCEEEEEECCCCEEHHEEECCCHHHHHHHHH
KTYRECGNVAFQDGRMVLEIEKFSYQTIEKWFAVIEKYQESSMLYLPTMARVMKQVEENP
HHHHHHCCEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCC
RMDASLFKTLLGFLYTNDESKKNWISHLHVALNWLTYLRRKN
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSITGNDIIKLGFDLLREGTLSIVDIVDAFKLAGIQSTELKLSSLKSPFGGDRFFEPK
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC
QLSATEINYPVYDRVTDFSEIIPQDDDQGLTALERLGSFVATDADEKYSVFDLFKTVAAI
CCCCEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
QDCLRNPEEDKPFLLVSADFSGIQDTVYTISSKGALKTLRARSFMLELLTEHIIYEILSE
HHHHCCCCCCCCEEEEECCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VESERYAVVFSGGGGFGLLLPNSEESIRTINDYRTRINEWAFDEFSGRFFIAMDALPFGR
HCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH
EELLSGMSFRNIRQTQADNLDRLKRRKFIDQFEQLFTPSMPKQLTVNTECQITRRDDMPD
HHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCH
EFMFDLETETRMSLVPAKEREDDKWIWVSESCYHQFWIGDKLATAQSVVRSQKTPEGKEP
HHEEECCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
YFKYPDATWSKENKSWVYYQIDDQQTKSADCWFMNDWTAGQPILYANYVRKHGELSEYAK
CEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEHHHHHHCCCHHHHHH
KLENESLKEENPTAKPNHTATFQGLAASSCGADLIGALRMDVDDMGNLFSSIGSLTELSA
HHHCCCCCCCCCCCCCCCCEEECCCHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KSRMLNLFFKVYLNQICAANLGGGFSYTDIAKKNYSVKNSHGDIGRNVSVIYAGGDDLFI
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEE
LGAWDETTELAFDIQRCFSLFTGETLNKEKKTVVEGLGISGGLTLHQPKFPLYQMAQKSG
EECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCC
EAEHGAKNDIEIQNAEIEKNRISLFFDDSKRQCRLKIQEPYRYMLSMKWDLSSAFLLPLM
CCCCCCCCCCEEECCEECCCEEEEEECCCCCEEEEEECCCCEEHHEEECCCHHHHHHHHH
KTYRECGNVAFQDGRMVLEIEKFSYQTIEKWFAVIEKYQESSMLYLPTMARVMKQVEENP
HHHHHHCCEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCC
RMDASLFKTLLGFLYTNDESKKNWISHLHVALNWLTYLRRKN
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]