| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357827
Identifier: 119357827
GI number: 119357827
Start: 2354141
End: 2355832
Strand: Direct
Name: 119357827
Synonym: Cpha266_2035
Alternate gene names: NA
Gene position: 2354141-2355832 (Clockwise)
Preceding gene: 119357826
Following gene: 119357833
Centisome position: 75.12
GC content: 48.11
Gene sequence:
>1692_bases TTGAACACTTTTTTACTCGATTATCGCCAGATCCGGACGCCGAAAAAAGGATTTTCCGGGATTTTCCGGGACTACGTTTC AGACGGACACGAGAGATCCCAACTCCTGACAGAATGTTTTCACCTCGATGCGGAAAAAGAAGGCGATTACTACAAACAGC TCAGCCTGCTTGGATCAAGAACCTATTCGAGAGCAACGCTTGTTGATCTCCTTAAACGTCAAAATCAGCGTTACGGATGC AGCGAGCTTCATCTCAAAGAGATCGAAAAACTCCGCTCGCCCCGATGTATGGTGGTCGTAACCGGCCAGCAGCCAGGGCT TTTTCTCGGCCCGCTCTACACGATGTATAAAGCCCTGAGCGCCATTGTTTTTGCAGAACGGCAAAAAGCGCTTTTTCCGG AATATGATTTTGTTCCGGTCTTCTGGATGGAAATTGAAGACCACGATTATGAAGAATCAGCGCACACCGCGCTCTTTTCG GGCGGCAAGGTTGCTCATTTCAGACCTGAACCCTATAAACGACTTCCTGACCAGATGATCGGCGGAAGCTCTTTTGGCGA AGAGATGCGAAACACCGTTGCAGAATTTATCGACACCCTTCAGGATTCGCCACACAAGGAAGCGATCTCCGGGCTGCTCA ACGCCGCCTATGCGCCTGGCAGCACATTCGAAACCGGTTTTGCGCAAACCATGATGCACCTGTTCAGAGATCAGCCACTT ATTCTGCTTTCAAGCCAGGATCGGGAGTTCAAAAAGCTCTCACGAAACATCTTCGCCAGAGAGCTTGCAACCTGCCCGAC AGCATCCTACAACGTCATCGCGCAGAGCTCGAAACTCGAAAAACTTGGCTACACAACACAATCAAAACCTCGGGCCGTCA ACCTCTTTTATATAAACACGGACAATCAGCGGCAGAAAATAGAGCTGCACGAAGAGGACACCTTTCAGATCCATCCGGAT AAACAACGCTATTCCCGACACCAGATTTTGGAATTATGCGAGGATCATCCTGAACGATTCAGCCCCAACGTTGTCCTTCG TCCGATAGTGCAAGACACCATTCTGCCGGTATTTGCCTGTATTGCCGGACCCGGCGAGATAAGTTATCTTGCGCAATACC GCAAAAACTACGAGCATTTCGGCATAACCATGCCCTTCATCATTCCAAGAGGCAGCTTTACCCTCATAGAACCAAAATTC AGCCGGATCATGGACAAGCTGCTCCGGATTACCGGCAAACCGGGATTTTCCAGAAAACAGATCTATCATGCCGTATTCAA CGATCTGCAAACCCTGAAAAAAAACGCCGAAGGAATTGCGGAACACCCCGACATCGAACGATTGTTCAATGAAACAAAAA CAGAAATGGAACGACTGCTGGAAAGCCTGGAACCGGTTCTTGCCAAAATAGACCCAACGCTCGCGCCGGTTCTGGCTGCG TCATCCGTTCAAACCCTTAAAATCATCGAATCGCTCGAACAGAAAACAAGAAAAGCAGGGCGAAAAAAAAACGAAGAACT TCTGGAACAGATACAGAAAAGCGAAACGGCATTTTTCCCGGAAGGAGTCCCGCAGGAAAGAATGATAAACAGTTTTTATT TCATCAATAAATATGGCCCATCGCTGATCGGTACACTCAAAAACCTTCTGAGCGGACACTCGACGGAAGAGCATATCATT GTGGAATTATAA
Upstream 100 bases:
>100_bases GTCAGAAAGCATTACGTTGCCGTAACTCCGATATCATGCGATTTTACAAACAGGGATTTCATGGGATCCCTGGAACAATG GAACCTGAAAAAATAGACTA
Downstream 100 bases:
>100_bases CCAACCAGGGGTCGATCGACCGAACGAACATGGGCTATTTCCCTTCACTCGCAGCACAGGCAATCTCCTCACCCTCTTTC TGCAAAAGCTGACAGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MNTFLLDYRQIRTPKKGFSGIFRDYVSDGHERSQLLTECFHLDAEKEGDYYKQLSLLGSRTYSRATLVDLLKRQNQRYGC SELHLKEIEKLRSPRCMVVVTGQQPGLFLGPLYTMYKALSAIVFAERQKALFPEYDFVPVFWMEIEDHDYEESAHTALFS GGKVAHFRPEPYKRLPDQMIGGSSFGEEMRNTVAEFIDTLQDSPHKEAISGLLNAAYAPGSTFETGFAQTMMHLFRDQPL ILLSSQDREFKKLSRNIFARELATCPTASYNVIAQSSKLEKLGYTTQSKPRAVNLFYINTDNQRQKIELHEEDTFQIHPD KQRYSRHQILELCEDHPERFSPNVVLRPIVQDTILPVFACIAGPGEISYLAQYRKNYEHFGITMPFIIPRGSFTLIEPKF SRIMDKLLRITGKPGFSRKQIYHAVFNDLQTLKKNAEGIAEHPDIERLFNETKTEMERLLESLEPVLAKIDPTLAPVLAA SSVQTLKIIESLEQKTRKAGRKKNEELLEQIQKSETAFFPEGVPQERMINSFYFINKYGPSLIGTLKNLLSGHSTEEHII VEL
Sequences:
>Translated_563_residues MNTFLLDYRQIRTPKKGFSGIFRDYVSDGHERSQLLTECFHLDAEKEGDYYKQLSLLGSRTYSRATLVDLLKRQNQRYGC SELHLKEIEKLRSPRCMVVVTGQQPGLFLGPLYTMYKALSAIVFAERQKALFPEYDFVPVFWMEIEDHDYEESAHTALFS GGKVAHFRPEPYKRLPDQMIGGSSFGEEMRNTVAEFIDTLQDSPHKEAISGLLNAAYAPGSTFETGFAQTMMHLFRDQPL ILLSSQDREFKKLSRNIFARELATCPTASYNVIAQSSKLEKLGYTTQSKPRAVNLFYINTDNQRQKIELHEEDTFQIHPD KQRYSRHQILELCEDHPERFSPNVVLRPIVQDTILPVFACIAGPGEISYLAQYRKNYEHFGITMPFIIPRGSFTLIEPKF SRIMDKLLRITGKPGFSRKQIYHAVFNDLQTLKKNAEGIAEHPDIERLFNETKTEMERLLESLEPVLAKIDPTLAPVLAA SSVQTLKIIESLEQKTRKAGRKKNEELLEQIQKSETAFFPEGVPQERMINSFYFINKYGPSLIGTLKNLLSGHSTEEHII VEL >Mature_563_residues MNTFLLDYRQIRTPKKGFSGIFRDYVSDGHERSQLLTECFHLDAEKEGDYYKQLSLLGSRTYSRATLVDLLKRQNQRYGC SELHLKEIEKLRSPRCMVVVTGQQPGLFLGPLYTMYKALSAIVFAERQKALFPEYDFVPVFWMEIEDHDYEESAHTALFS GGKVAHFRPEPYKRLPDQMIGGSSFGEEMRNTVAEFIDTLQDSPHKEAISGLLNAAYAPGSTFETGFAQTMMHLFRDQPL ILLSSQDREFKKLSRNIFARELATCPTASYNVIAQSSKLEKLGYTTQSKPRAVNLFYINTDNQRQKIELHEEDTFQIHPD KQRYSRHQILELCEDHPERFSPNVVLRPIVQDTILPVFACIAGPGEISYLAQYRKNYEHFGITMPFIIPRGSFTLIEPKF SRIMDKLLRITGKPGFSRKQIYHAVFNDLQTLKKNAEGIAEHPDIERLFNETKTEMERLLESLEPVLAKIDPTLAPVLAA SSVQTLKIIESLEQKTRKAGRKKNEELLEQIQKSETAFFPEGVPQERMINSFYFINKYGPSLIGTLKNLLSGHSTEEHII VEL
Specific function: Unknown
COG id: COG4365
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0747 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2035_CHLPD (A1BI20)
Other databases:
- EMBL: CP000492 - RefSeq: YP_912471.1 - STRING: A1BI20 - GeneID: 4569155 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_2035 - NMPDR: fig|290317.7.peg.2150 - eggNOG: COG4365 - HOGENOM: HBG405051 - OMA: TRPLMQE - ProtClustDB: CLSK637822 - HAMAP: MF_01867 - InterPro: IPR011199 - PIRSF: PIRSF012535
Pfam domain/function: PF10079 DUF2317
EC number: NA
Molecular weight: Translated: 64672; Mature: 64672
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFLLDYRQIRTPKKGFSGIFRDYVSDGHERSQLLTECFHLDAEKEGDYYKQLSLLGSR CCCEEECHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC TYSRATLVDLLKRQNQRYGCSELHLKEIEKLRSPRCMVVVTGQQPGLFLGPLYTMYKALS CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHH AIVFAERQKALFPEYDFVPVFWMEIEDHDYEESAHTALFSGGKVAHFRPEPYKRLPDQMI HHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHCCHHHC GGSSFGEEMRNTVAEFIDTLQDSPHKEAISGLLNAAYAPGSTFETGFAQTMMHLFRDQPL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCE ILLSSQDREFKKLSRNIFARELATCPTASYNVIAQSSKLEKLGYTTQSKPRAVNLFYINT EEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHCCCCCCCCCEEEEEEEEC DNQRQKIELHEEDTFQIHPDKQRYSRHQILELCEDHPERFSPNVVLRPIVQDTILPVFAC CCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHH IAGPGEISYLAQYRKNYEHFGITMPFIIPRGSFTLIEPKFSRIMDKLLRITGKPGFSRKQ HCCCCHHHHHHHHHHCHHHCCEEECEEEECCCEEEECHHHHHHHHHHHHHCCCCCCHHHH IYHAVFNDLQTLKKNAEGIAEHPDIERLFNETKTEMERLLESLEPVLAKIDPTLAPVLAA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SSVQTLKIIESLEQKTRKAGRKKNEELLEQIQKSETAFFPEGVPQERMINSFYFINKYGP CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCH SLIGTLKNLLSGHSTEEHIIVEL HHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MNTFLLDYRQIRTPKKGFSGIFRDYVSDGHERSQLLTECFHLDAEKEGDYYKQLSLLGSR CCCEEECHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC TYSRATLVDLLKRQNQRYGCSELHLKEIEKLRSPRCMVVVTGQQPGLFLGPLYTMYKALS CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHHHHH AIVFAERQKALFPEYDFVPVFWMEIEDHDYEESAHTALFSGGKVAHFRPEPYKRLPDQMI HHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCHHHHCCHHHC GGSSFGEEMRNTVAEFIDTLQDSPHKEAISGLLNAAYAPGSTFETGFAQTMMHLFRDQPL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCE ILLSSQDREFKKLSRNIFARELATCPTASYNVIAQSSKLEKLGYTTQSKPRAVNLFYINT EEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHCCCCCCCCCEEEEEEEEC DNQRQKIELHEEDTFQIHPDKQRYSRHQILELCEDHPERFSPNVVLRPIVQDTILPVFAC CCCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHH IAGPGEISYLAQYRKNYEHFGITMPFIIPRGSFTLIEPKFSRIMDKLLRITGKPGFSRKQ HCCCCHHHHHHHHHHCHHHCCEEECEEEECCCEEEECHHHHHHHHHHHHHCCCCCCHHHH IYHAVFNDLQTLKKNAEGIAEHPDIERLFNETKTEMERLLESLEPVLAKIDPTLAPVLAA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SSVQTLKIIESLEQKTRKAGRKKNEELLEQIQKSETAFFPEGVPQERMINSFYFINKYGP CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCH SLIGTLKNLLSGHSTEEHIIVEL HHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA