| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is surE
Identifier: 119357826
GI number: 119357826
Start: 2353360
End: 2354136
Strand: Direct
Name: surE
Synonym: Cpha266_2034
Alternate gene names: 119357826
Gene position: 2353360-2354136 (Clockwise)
Preceding gene: 119357825
Following gene: 119357827
Centisome position: 75.09
GC content: 49.68
Gene sequence:
>777_bases GTGGATCAACTGAAAAAGCCTCATATTCTGCTGTGCAACGATGACGGCATTGAAGGAGAAGGCCTGCATGCGCTTGCCGC TTCCATGAAAAAAATAGGTAACATAACCGTCGTGGCACCGGCTGAACCGCATAGCGGCATGAGCCACGCCATGACGCTCG GCACCCCCCTTCGAATAAAAAAATATTATAAAAACAACCGGTTTTTCGGCTATACCGTATCGGGAACGCCCGTTGACTGC GTAAAAGTAGCATTAAGCCAGATACTCCCGTCGAAACCCGATCTGCTCGTCTCCGGCATCAATTACGGCAGCAACACAGC AACGAATACACTCTATTCAGGAACCGTTGCCGCAGCTCTCGAAGGAGCAATTCAGGGCATTACCTCGCTTGCGTTTTCTC TGGCAACCTATGAAAATGCCGATTTCTCCTATGCGGCAAAATTTGCCCGAAAACTCTCGAAAAAAGTATTAACCGAAGGA CTGCCGCCGGATACGATTCTCTCCGTGAACATTCCAAACATCCCGGAATCGGAAATCCAGGGCATTCTGGTTACCGAACA GGGCCGATCGCGATGGGAAGAGGACGCTATCGAGCGGCATGACGTTTACGGCAACCCCTATTACTGGCTGAACGGCACCC TGATGCTCCTCGATACATCGCTTCAACATGACGAGTACGCAGTCAGAAAGCATTACGTTGCCGTAACTCCGATATCATGC GATTTTACAAACAGGGATTTCATGGGATCCCTGGAACAATGGAACCTGAAAAAATAG
Upstream 100 bases:
>100_bases ACTCTATTTCAGTCTGGGACATGATTTTTGAACGAAACTTTTTCTTACTATGGTTCACCGACAGATACGGTTTTTTGCAT AACCCCCATACCCCCATGTT
Downstream 100 bases:
>100_bases ACTATTGAACACTTTTTTACTCGATTATCGCCAGATCCGGACGCCGAAAAAAGGATTTTCCGGGATTTTCCGGGACTACG TTTCAGACGGACACGAGAGA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MDQLKKPHILLCNDDGIEGEGLHALAASMKKIGNITVVAPAEPHSGMSHAMTLGTPLRIKKYYKNNRFFGYTVSGTPVDC VKVALSQILPSKPDLLVSGINYGSNTATNTLYSGTVAAALEGAIQGITSLAFSLATYENADFSYAAKFARKLSKKVLTEG LPPDTILSVNIPNIPESEIQGILVTEQGRSRWEEDAIERHDVYGNPYYWLNGTLMLLDTSLQHDEYAVRKHYVAVTPISC DFTNRDFMGSLEQWNLKK
Sequences:
>Translated_258_residues MDQLKKPHILLCNDDGIEGEGLHALAASMKKIGNITVVAPAEPHSGMSHAMTLGTPLRIKKYYKNNRFFGYTVSGTPVDC VKVALSQILPSKPDLLVSGINYGSNTATNTLYSGTVAAALEGAIQGITSLAFSLATYENADFSYAAKFARKLSKKVLTEG LPPDTILSVNIPNIPESEIQGILVTEQGRSRWEEDAIERHDVYGNPYYWLNGTLMLLDTSLQHDEYAVRKHYVAVTPISC DFTNRDFMGSLEQWNLKK >Mature_258_residues MDQLKKPHILLCNDDGIEGEGLHALAASMKKIGNITVVAPAEPHSGMSHAMTLGTPLRIKKYYKNNRFFGYTVSGTPVDC VKVALSQILPSKPDLLVSGINYGSNTATNTLYSGTVAAALEGAIQGITSLAFSLATYENADFSYAAKFARKLSKKVLTEG LPPDTILSVNIPNIPESEIQGILVTEQGRSRWEEDAIERHDVYGNPYYWLNGTLMLLDTSLQHDEYAVRKHYVAVTPISC DFTNRDFMGSLEQWNLKK
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=249, Percent_Identity=34.5381526104418, Blast_Score=147, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_CHLPD (A1BI19)
Other databases:
- EMBL: CP000492 - RefSeq: YP_912470.1 - ProteinModelPortal: A1BI19 - SMR: A1BI19 - STRING: A1BI19 - GeneID: 4569154 - GenomeReviews: CP000492_GR - KEGG: cph:Cpha266_2034 - NMPDR: fig|290317.7.peg.2149 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: SINVIYS - ProtClustDB: PRK13932 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 28387; Mature: 28387
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQLKKPHILLCNDDGIEGEGLHALAASMKKIGNITVVAPAEPHSGMSHAMTLGTPLRIK CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHEECCCCHHHH KYYKNNRFFGYTVSGTPVDCVKVALSQILPSKPDLLVSGINYGSNTATNTLYSGTVAAAL HHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCHHHHHH EGAIQGITSLAFSLATYENADFSYAAKFARKLSKKVLTEGLPPDTILSVNIPNIPESEIQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCC GILVTEQGRSRWEEDAIERHDVYGNPYYWLNGTLMLLDTSLQHDEYAVRKHYVAVTPISC EEEEECCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCHHHHHHEEEEEEEEEC DFTNRDFMGSLEQWNLKK CCCCCHHHCCCCCCCCCC >Mature Secondary Structure MDQLKKPHILLCNDDGIEGEGLHALAASMKKIGNITVVAPAEPHSGMSHAMTLGTPLRIK CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHEECCCCHHHH KYYKNNRFFGYTVSGTPVDCVKVALSQILPSKPDLLVSGINYGSNTATNTLYSGTVAAAL HHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCHHHHHH EGAIQGITSLAFSLATYENADFSYAAKFARKLSKKVLTEGLPPDTILSVNIPNIPESEIQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCC GILVTEQGRSRWEEDAIERHDVYGNPYYWLNGTLMLLDTSLQHDEYAVRKHYVAVTPISC EEEEECCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCHHHHHHEEEEEEEEEC DFTNRDFMGSLEQWNLKK CCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA