| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357787
Identifier: 119357787
GI number: 119357787
Start: 2309405
End: 2309848
Strand: Reverse
Name: 119357787
Synonym: Cpha266_1994
Alternate gene names: NA
Gene position: 2309848-2309405 (Counterclockwise)
Preceding gene: 119357788
Following gene: 119357786
Centisome position: 73.71
GC content: 47.52
Gene sequence:
>444_bases ATGGATAAAGAAAAAAAAGATGTACAGTACCGGTTTGATCTTGCCGCCGGTTTTCTCGCTGAGGCAGAAGATGATTTTCA GTTAAAACGGTGGAGATCGTGTGTTTCCGGATCAATATTGTCCATTGAAAATGCAGGGCTTGCTGTACTCATGCTTTTCG GCGTTTCGCGGCTTACGCATCATCCTGACAAGCACCTTCCGCAGCTTCTCGCCGAAGGTACGGTTTCAGAAGAGATTGGC GGTTTGATTGAACAACTGATTCCTGAGCTTGAACGGCATGATTCTCATGAAAAAATGCTGGTGAAATATGGCAGGGAGCC TTTATATATGCTTCCATGGCAGATATTTACCGAAAAGGAGGCTTCGGAGGCGCTTGAAGGGGCAAGAAAGAGCGTTTCGC TCTTGGGGAAACTTATGGCGCTCATGACGGTTCCTCCCCGCTGA
Upstream 100 bases:
>100_bases GCCTGTGTCGAAGTCCGGTGTACCGGTGCGACTTGTTTTTTTTTCGAAGCCGATCATTACCGGTTAATTTCTTTTCAGCA GTTTTCACAAGAGGTCTTTT
Downstream 100 bases:
>100_bases AGATTTTCAGGCATAAAGGGCGGTTTCTATAGGCTTTTCCGATTTATGAAGAGGCGAGCGTGCTGAACCGTATAGAACAG GTGAAGGTTTGTGTTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDKEKKDVQYRFDLAAGFLAEAEDDFQLKRWRSCVSGSILSIENAGLAVLMLFGVSRLTHHPDKHLPQLLAEGTVSEEIG GLIEQLIPELERHDSHEKMLVKYGREPLYMLPWQIFTEKEASEALEGARKSVSLLGKLMALMTVPPR
Sequences:
>Translated_147_residues MDKEKKDVQYRFDLAAGFLAEAEDDFQLKRWRSCVSGSILSIENAGLAVLMLFGVSRLTHHPDKHLPQLLAEGTVSEEIG GLIEQLIPELERHDSHEKMLVKYGREPLYMLPWQIFTEKEASEALEGARKSVSLLGKLMALMTVPPR >Mature_147_residues MDKEKKDVQYRFDLAAGFLAEAEDDFQLKRWRSCVSGSILSIENAGLAVLMLFGVSRLTHHPDKHLPQLLAEGTVSEEIG GLIEQLIPELERHDSHEKMLVKYGREPLYMLPWQIFTEKEASEALEGARKSVSLLGKLMALMTVPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16618; Mature: 16618
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKEKKDVQYRFDLAAGFLAEAEDDFQLKRWRSCVSGSILSIENAGLAVLMLFGVSRLTH CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC HPDKHLPQLLAEGTVSEEIGGLIEQLIPELERHDSHEKMLVKYGREPLYMLPWQIFTEKE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHH ASEALEGARKSVSLLGKLMALMTVPPR HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDKEKKDVQYRFDLAAGFLAEAEDDFQLKRWRSCVSGSILSIENAGLAVLMLFGVSRLTH CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHC HPDKHLPQLLAEGTVSEEIGGLIEQLIPELERHDSHEKMLVKYGREPLYMLPWQIFTEKE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCHHHHHHHH ASEALEGARKSVSLLGKLMALMTVPPR HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA