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The map label for this gene is arnC [H]

Identifier: 119357773

GI number: 119357773

Start: 2293887

End: 2294858

Strand: Reverse

Name: arnC [H]

Synonym: Cpha266_1980

Alternate gene names: 119357773

Gene position: 2294858-2293887 (Counterclockwise)

Preceding gene: 119357775

Following gene: 119357770

Centisome position: 73.23

GC content: 46.5

Gene sequence:

>972_bases
TTGACAGCACTATCCCTTATCGTTCCCGTCTATAATGAACGGGAATCACTGCCTGAACTGCTCGAAAGGCTCTATCGGGC
AATGGCGGACAAACAACTGCATGTGCTTTTTCAGGAATCGTTCAGTTTTGAAATTATCATCGTTGACGATGGTTCAATTG
ATGGTTCCGATAAGCTGGTCAGGGAGATGATTTCAACGAAACAGGAACTCAGGCTGATCTCTTTTCAACGAAATTTCGGT
AAGACAGCAGCGCTTTCTGCCGGGTTCAAGGCGGCGTCAGGTCGATATGTCTGTACTATTGATGCGGATTTGCAGGATGA
TCCATTTGCTATCAAGGAGCTGATAAAAAAACTCGAAGAGGGTTACGATCTTGTCAGCGGATGGAAACAGCAGCGTCAGG
ATCCTTTAGGTAAAACTCTGCCATCAATGGTTTTCAATACGGTTACCAGGCTTTTTACCGGTATTCCGATTCATGATTTC
AATTGCGGCCTGAAGGTCTATCGGAGCGAGGTTGTCCGGCGAATAGAGCTGCATGGCGAGATGCACCGTTATATTCCGGT
TCTTGCCCATTGGAACGGGTTTGCCATTGCGGAACTGCCGGTGGTTCATCAGTCAAGAAAATACGGACAGTCAAAATTCG
GTGCGGGTCGTTTTTTTGCAGGACTTTTTGATTTTCTTGCGGTGGTGTTTATAACCCGATATTTCCGCAGGCCGATGCAT
TTTTTCGGCATGATGGGGCTTATCAGCTTTCTGTCGGGATTCATCATCAGTCTCTATGTTACCCTCGACAAAATTCTCTA
TGCAAAACCGGTCAGTAACCGGCCCATTCTCTTTCTCGGTATTCTGTTGATCATTCTCGGCGCTCAGCTTTTTTCAACCG
GACTTCTTGGAGAGATGCTTTCGACCTCATCGTCCGGAAGCGGAAACGATTATACCATCAGAGATACGGTGAACTTTCAG
TCGGAAGTGTAA

Upstream 100 bases:

>100_bases
CCAACAAATAACCGGAAGGAGCAAGCTCCGCATTTGACTTTTGATCGATTACTCTTTACCTTGGTTGTCTTGACCATATA
ATGTTTTATCCCACTGAATC

Downstream 100 bases:

>100_bases
TGGTCTCCTTACGTTCCTCTTGTTGCCAAAGGCCAGATATATTTGTGAAGCTGGAGTTGCATCCTGACCGGAAGCCTGTC
GCGAAGAATCCATTCCGCAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTALSLIVPVYNERESLPELLERLYRAMADKQLHVLFQESFSFEIIIVDDGSIDGSDKLVREMISTKQELRLISFQRNFG
KTAALSAGFKAASGRYVCTIDADLQDDPFAIKELIKKLEEGYDLVSGWKQQRQDPLGKTLPSMVFNTVTRLFTGIPIHDF
NCGLKVYRSEVVRRIELHGEMHRYIPVLAHWNGFAIAELPVVHQSRKYGQSKFGAGRFFAGLFDFLAVVFITRYFRRPMH
FFGMMGLISFLSGFIISLYVTLDKILYAKPVSNRPILFLGILLIILGAQLFSTGLLGEMLSTSSSGSGNDYTIRDTVNFQ
SEV

Sequences:

>Translated_323_residues
MTALSLIVPVYNERESLPELLERLYRAMADKQLHVLFQESFSFEIIIVDDGSIDGSDKLVREMISTKQELRLISFQRNFG
KTAALSAGFKAASGRYVCTIDADLQDDPFAIKELIKKLEEGYDLVSGWKQQRQDPLGKTLPSMVFNTVTRLFTGIPIHDF
NCGLKVYRSEVVRRIELHGEMHRYIPVLAHWNGFAIAELPVVHQSRKYGQSKFGAGRFFAGLFDFLAVVFITRYFRRPMH
FFGMMGLISFLSGFIISLYVTLDKILYAKPVSNRPILFLGILLIILGAQLFSTGLLGEMLSTSSSGSGNDYTIRDTVNFQ
SEV
>Mature_322_residues
TALSLIVPVYNERESLPELLERLYRAMADKQLHVLFQESFSFEIIIVDDGSIDGSDKLVREMISTKQELRLISFQRNFGK
TAALSAGFKAASGRYVCTIDADLQDDPFAIKELIKKLEEGYDLVSGWKQQRQDPLGKTLPSMVFNTVTRLFTGIPIHDFN
CGLKVYRSEVVRRIELHGEMHRYIPVLAHWNGFAIAELPVVHQSRKYGQSKFGAGRFFAGLFDFLAVVFITRYFRRPMHF
FGMMGLISFLSGFIISLYVTLDKILYAKPVSNRPILFLGILLIILGAQLFSTGLLGEMLSTSSSGSGNDYTIRDTVNFQS
EV

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=241, Percent_Identity=29.045643153527, Blast_Score=92, Evalue=9e-19,
Organism=Escherichia coli, GI1788588, Length=300, Percent_Identity=32, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1788692, Length=303, Percent_Identity=28.0528052805281, Blast_Score=113, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71999402, Length=231, Percent_Identity=25.5411255411255, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24585265, Length=230, Percent_Identity=27.8260869565217, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36523; Mature: 36392

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALSLIVPVYNERESLPELLERLYRAMADKQLHVLFQESFSFEIIIVDDGSIDGSDKLV
CCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
REMISTKQELRLISFQRNFGKTAALSAGFKAASGRYVCTIDADLQDDPFAIKELIKKLEE
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
GYDLVSGWKQQRQDPLGKTLPSMVFNTVTRLFTGIPIHDFNCGLKVYRSEVVRRIELHGE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
MHRYIPVLAHWNGFAIAELPVVHQSRKYGQSKFGAGRFFAGLFDFLAVVFITRYFRRPMH
HHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFGMMGLISFLSGFIISLYVTLDKILYAKPVSNRPILFLGILLIILGAQLFSTGLLGEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STSSSGSGNDYTIRDTVNFQSEV
HCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TALSLIVPVYNERESLPELLERLYRAMADKQLHVLFQESFSFEIIIVDDGSIDGSDKLV
CCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
REMISTKQELRLISFQRNFGKTAALSAGFKAASGRYVCTIDADLQDDPFAIKELIKKLEE
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
GYDLVSGWKQQRQDPLGKTLPSMVFNTVTRLFTGIPIHDFNCGLKVYRSEVVRRIELHGE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
MHRYIPVLAHWNGFAIAELPVVHQSRKYGQSKFGAGRFFAGLFDFLAVVFITRYFRRPMH
HHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFGMMGLISFLSGFIISLYVTLDKILYAKPVSNRPILFLGILLIILGAQLFSTGLLGEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STSSSGSGNDYTIRDTVNFQSEV
HCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA