| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is wbbL [H]
Identifier: 119357728
GI number: 119357728
Start: 2239784
End: 2240863
Strand: Reverse
Name: wbbL [H]
Synonym: Cpha266_1932
Alternate gene names: 119357728
Gene position: 2240863-2239784 (Counterclockwise)
Preceding gene: 119357729
Following gene: 119357724
Centisome position: 71.5
GC content: 49.63
Gene sequence:
>1080_bases ATGATTGAACCCGAACGGCTCCGCCCCGCCGTTGACATTATCATTCCCCATTTTCGGGGACTGGAGATGCTTGAACGCTC TCTTGAGTCGCTTGAAAAAACCCGTTATCCCTCTATGGGAATTATTGTTGTTGATAACGGAGGCGATCAGGCCGGGCTTG TTTTTCTTGTAAAAAGATTCAGAAATGCACGGCTCCTGCGACTCAGGGAAAACAAGGGCTATGCCGGTGGTTGCAACGAA GGGCTTCGTTTTTCATCGGCTGAATATCTTGTTTTTATGAACGACGATACCGAACATGATCCGTTCTGGCTTGAGCACCT TGTTCAGTCTGCCGAGGCTGATAAGGGTATCGGTGCGTTGCAGCCGAAAATCCTGTCGCTCAAGGCCTGGCGGAAACGGC AAAGGGTTTTCGATTATGCCGGAGCAGCAGGAGGTATGATAGACCGTTTCGGGTATCCCTGGTGTCTCGGCAGAAATTTC ATGCGCATCGAGCAGGATTCCGGTCAGTTTGACAAGTCGCAGGAGATTTTCTGGGCATCGGGAGTAGCTCTTTTTGCTCG ACGAAGCGTTATTGAGCAGGTTGGCGGATTTGATGAGCGTTTTTTCATGCACATGGAAGAGATTGATCTTTGCTGGCGCA TGAAACTTGCCGGATTCAGTATCAGATCGCAGCCATTGTCGGTTGTTTTTCATGAAGGCGCAGCATCGATGCCGGAGGGT TCTGCTGAAAAAATTTTCCTCAATCATCGAAACAATATCACCATGCTTCTGAAAAACCGGGGAGCTCTGTCGCTTTTACC GGTTGTGTCTGTGCGGCTTTTTCTTGAGTTTGCCGCAGCGTTGTTTTATCTCATGCAAGGTTCCGGCGGAGTGAAAAAAT TCCGGGCGGTTTTCAGGGCACTCCGGCAAAACGCGCAGTACCTGCCGGAAACGCTCAGCAAGCGAAAACTCATACAGGGA TCGAGAAAGATCAGCGACAGGGAGTTATTCAGAGATATGCCGTTTTCGCTCTTTTTGAGGAAGCTGAATCAATTTACGTT TTTGGTCCGGAAAGGTGGCCCCAGGCGATCATATCCCTGA
Upstream 100 bases:
>100_bases CACAGCTCTTTTGCAGCATATCGCCGGAGCCGGAACGCCTGAAGAGACCGCCAGACTTGCCGGAGAGTTCTGGCAGACAC TACAGTAATGCGCTTCAGTC
Downstream 100 bases:
>100_bases CTGCTTCGAGAATGCTCTTTTTTATCGGCATAAAGGTCATGCCGAAATCCTTCCTGATTTTGCTGTTATCGATCTGCAAC AGGCGGCCAACATGAGTGCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIEPERLRPAVDIIIPHFRGLEMLERSLESLEKTRYPSMGIIVVDNGGDQAGLVFLVKRFRNARLLRLRENKGYAGGCNE GLRFSSAEYLVFMNDDTEHDPFWLEHLVQSAEADKGIGALQPKILSLKAWRKRQRVFDYAGAAGGMIDRFGYPWCLGRNF MRIEQDSGQFDKSQEIFWASGVALFARRSVIEQVGGFDERFFMHMEEIDLCWRMKLAGFSIRSQPLSVVFHEGAASMPEG SAEKIFLNHRNNITMLLKNRGALSLLPVVSVRLFLEFAAALFYLMQGSGGVKKFRAVFRALRQNAQYLPETLSKRKLIQG SRKISDRELFRDMPFSLFLRKLNQFTFLVRKGGPRRSYP
Sequences:
>Translated_359_residues MIEPERLRPAVDIIIPHFRGLEMLERSLESLEKTRYPSMGIIVVDNGGDQAGLVFLVKRFRNARLLRLRENKGYAGGCNE GLRFSSAEYLVFMNDDTEHDPFWLEHLVQSAEADKGIGALQPKILSLKAWRKRQRVFDYAGAAGGMIDRFGYPWCLGRNF MRIEQDSGQFDKSQEIFWASGVALFARRSVIEQVGGFDERFFMHMEEIDLCWRMKLAGFSIRSQPLSVVFHEGAASMPEG SAEKIFLNHRNNITMLLKNRGALSLLPVVSVRLFLEFAAALFYLMQGSGGVKKFRAVFRALRQNAQYLPETLSKRKLIQG SRKISDRELFRDMPFSLFLRKLNQFTFLVRKGGPRRSYP >Mature_359_residues MIEPERLRPAVDIIIPHFRGLEMLERSLESLEKTRYPSMGIIVVDNGGDQAGLVFLVKRFRNARLLRLRENKGYAGGCNE GLRFSSAEYLVFMNDDTEHDPFWLEHLVQSAEADKGIGALQPKILSLKAWRKRQRVFDYAGAAGGMIDRFGYPWCLGRNF MRIEQDSGQFDKSQEIFWASGVALFARRSVIEQVGGFDERFFMHMEEIDLCWRMKLAGFSIRSQPLSVVFHEGAASMPEG SAEKIFLNHRNNITMLLKNRGALSLLPVVSVRLFLEFAAALFYLMQGSGGVKKFRAVFRALRQNAQYLPETLSKRKLIQG SRKISDRELFRDMPFSLFLRKLNQFTFLVRKGGPRRSYP
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 41206; Mature: 41206
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEPERLRPAVDIIIPHFRGLEMLERSLESLEKTRYPSMGIIVVDNGGDQAGLVFLVKRF CCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH RNARLLRLRENKGYAGGCNEGLRFSSAEYLVFMNDDTEHDPFWLEHLVQSAEADKGIGAL CCCEEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCC QPKILSLKAWRKRQRVFDYAGAAGGMIDRFGYPWCLGRNFMRIEQDSGQFDKSQEIFWAS CCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCEEEECCCCCCCCCCCEEEHH GVALFARRSVIEQVGGFDERFFMHMEEIDLCWRMKLAGFSIRSQPLSVVFHEGAASMPEG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCC SAEKIFLNHRNNITMLLKNRGALSLLPVVSVRLFLEFAAALFYLMQGSGGVKKFRAVFRA CCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LRQNAQYLPETLSKRKLIQGSRKISDRELFRDMPFSLFLRKLNQFTFLVRKGGPRRSYP HHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHEEEEECCCCCCCCC >Mature Secondary Structure MIEPERLRPAVDIIIPHFRGLEMLERSLESLEKTRYPSMGIIVVDNGGDQAGLVFLVKRF CCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH RNARLLRLRENKGYAGGCNEGLRFSSAEYLVFMNDDTEHDPFWLEHLVQSAEADKGIGAL CCCEEEEEECCCCCCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCC QPKILSLKAWRKRQRVFDYAGAAGGMIDRFGYPWCLGRNFMRIEQDSGQFDKSQEIFWAS CCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCEEEECCCCCCCCCCCEEEHH GVALFARRSVIEQVGGFDERFFMHMEEIDLCWRMKLAGFSIRSQPLSVVFHEGAASMPEG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCC SAEKIFLNHRNNITMLLKNRGALSLLPVVSVRLFLEFAAALFYLMQGSGGVKKFRAVFRA CCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LRQNAQYLPETLSKRKLIQGSRKISDRELFRDMPFSLFLRKLNQFTFLVRKGGPRRSYP HHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]