| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is cutF [C]
Identifier: 119357724
GI number: 119357724
Start: 2236265
End: 2237101
Strand: Reverse
Name: cutF [C]
Synonym: Cpha266_1928
Alternate gene names: 119357724
Gene position: 2237101-2236265 (Counterclockwise)
Preceding gene: 119357728
Following gene: 119357723
Centisome position: 71.38
GC content: 49.1
Gene sequence:
>837_bases ATGAAAAAGAGCGCTGTACTTATCGCTGGTGGCTGCATTATGATGCTGTTGAGCAGTTGCAGGGATCAGGTGAAAGCTGA AAGCTATAAAAATTCCGGAAAAGGCACTCCGCTGACAGCGGGAGCTACAGGTGATAACAGCGAAACATCGCTCGACTGGA ACGGCACCTACAAAGGGATTCTTCCCTGCGCTGACTGTGAGGGAATCGAAACTGCCCTTACCTTGACTAAAGAGAGTACC TATCTGCTCGAGAGCAGGTATCGTGGAAAAGGAAAACAGATATATGTCGAGCAGGGAACCTTTTCCTGGAATACACAAGG AAATACGATCCAGTTGTCAGGAGGAAAAGATGGGCTTGGAAAGTATTTCGTCGGAGAAAATATGCTTATCCAGCTTGACC GGAGCGGCCAGAGAGTCAGCGGAGCGCTTGCCGACAACTATATCCTGAAAAAAACCGGACTGACAATGGCGATTGTATCT GATGCGACTCTGACTGAAACATACTGGAAGCTGACGGAAGTGATGGGCAAGCCCCTAAAAACATCGGCAATGCAGAAGCG GGAAGCGCACCTCATTCTTAAAAAAGATGGAAGCAGGGTGCAGGGTTTCGGCGGATGCAACACCTTTTTCGGCAGTTACG GGCTGAATCCCGGCAATCGCATTCATTTTGATAAAATAGCCTCAACCATGATGGCCTGTCCCGATATGGAAACGGAATCC GGGTTCTTCAAGGTGCTTCAGATGGCTGACAACTATGCCATACAGGGCGACAAGCTCCAGCTCAACAAAGCAAGAATGGC CCCGCTGGCCAAATTTGAGGCAGTGTATCTGAAGTGA
Upstream 100 bases:
>100_bases TCTTTCGGTTTAAAAAAAAAGAGCGTAACTTATTTGTGTTGTGTTTGAGTCCTGAGCCTTAATCCTTTTCACACTGTATT ATTCCGGGGAGAGATATTTT
Downstream 100 bases:
>100_bases ATTGAAAGGAAGGTGAACTGTATGCCAAAGAAAGCACGATCGCCGATAAGAATGGCTCTATACCTTTTCAGAACAGCGTT GCCGTCAGCGCTGTGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Copper Resistance Lipoprotein NlpE; Copper Homeostasis Protein CutF; Lipoprotein NlpE Involved In Copper Resistance; Heat Shock Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKKSAVLIAGGCIMMLLSSCRDQVKAESYKNSGKGTPLTAGATGDNSETSLDWNGTYKGILPCADCEGIETALTLTKEST YLLESRYRGKGKQIYVEQGTFSWNTQGNTIQLSGGKDGLGKYFVGENMLIQLDRSGQRVSGALADNYILKKTGLTMAIVS DATLTETYWKLTEVMGKPLKTSAMQKREAHLILKKDGSRVQGFGGCNTFFGSYGLNPGNRIHFDKIASTMMACPDMETES GFFKVLQMADNYAIQGDKLQLNKARMAPLAKFEAVYLK
Sequences:
>Translated_278_residues MKKSAVLIAGGCIMMLLSSCRDQVKAESYKNSGKGTPLTAGATGDNSETSLDWNGTYKGILPCADCEGIETALTLTKEST YLLESRYRGKGKQIYVEQGTFSWNTQGNTIQLSGGKDGLGKYFVGENMLIQLDRSGQRVSGALADNYILKKTGLTMAIVS DATLTETYWKLTEVMGKPLKTSAMQKREAHLILKKDGSRVQGFGGCNTFFGSYGLNPGNRIHFDKIASTMMACPDMETES GFFKVLQMADNYAIQGDKLQLNKARMAPLAKFEAVYLK >Mature_278_residues MKKSAVLIAGGCIMMLLSSCRDQVKAESYKNSGKGTPLTAGATGDNSETSLDWNGTYKGILPCADCEGIETALTLTKEST YLLESRYRGKGKQIYVEQGTFSWNTQGNTIQLSGGKDGLGKYFVGENMLIQLDRSGQRVSGALADNYILKKTGLTMAIVS DATLTETYWKLTEVMGKPLKTSAMQKREAHLILKKDGSRVQGFGGCNTFFGSYGLNPGNRIHFDKIASTMMACPDMETES GFFKVLQMADNYAIQGDKLQLNKARMAPLAKFEAVYLK
Specific function: Involved In Copper Homeostasis. Could Be Involved In Both Copper Efflux And The Delivery Of Copper To Copper-Dependent Enzymes. [C]
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30338; Mature: 30338
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSAVLIAGGCIMMLLSSCRDQVKAESYKNSGKGTPLTAGATGDNSETSLDWNGTYKGI CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEECCCCCCCC LPCADCEGIETALTLTKESTYLLESRYRGKGKQIYVEQGTFSWNTQGNTIQLSGGKDGLG EECCCCCCCEEEEEEECCCCEEEHHHHCCCCCEEEEECCEEEECCCCCEEEECCCCCCCC KYFVGENMLIQLDRSGQRVSGALADNYILKKTGLTMAIVSDATLTETYWKLTEVMGKPLK CEEECCCEEEEECCCCCEEECHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCH TSAMQKREAHLILKKDGSRVQGFGGCNTFFGSYGLNPGNRIHFDKIASTMMACPDMETES HHHHHHHCEEEEEECCCCEEECCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCH GFFKVLQMADNYAIQGDKLQLNKARMAPLAKFEAVYLK HHHHHHHHHCCEEECCCEEEECHHHCCCHHHEEEEEEC >Mature Secondary Structure MKKSAVLIAGGCIMMLLSSCRDQVKAESYKNSGKGTPLTAGATGDNSETSLDWNGTYKGI CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEECCCCCCCC LPCADCEGIETALTLTKESTYLLESRYRGKGKQIYVEQGTFSWNTQGNTIQLSGGKDGLG EECCCCCCCEEEEEEECCCCEEEHHHHCCCCCEEEEECCEEEECCCCCEEEECCCCCCCC KYFVGENMLIQLDRSGQRVSGALADNYILKKTGLTMAIVSDATLTETYWKLTEVMGKPLK CEEECCCEEEEECCCCCEEECHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCH TSAMQKREAHLILKKDGSRVQGFGGCNTFFGSYGLNPGNRIHFDKIASTMMACPDMETES HHHHHHHCEEEEEECCCCEEECCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCH GFFKVLQMADNYAIQGDKLQLNKARMAPLAKFEAVYLK HHHHHHHHHCCEEECCCEEEECHHHCCCHHHEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA