| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is yhdN [H]
Identifier: 119357716
GI number: 119357716
Start: 2228136
End: 2229095
Strand: Reverse
Name: yhdN [H]
Synonym: Cpha266_1920
Alternate gene names: 119357716
Gene position: 2229095-2228136 (Counterclockwise)
Preceding gene: 119357717
Following gene: 119357709
Centisome position: 71.13
GC content: 53.65
Gene sequence:
>960_bases ATGCTGAAACGTCGTCTTGGAAATACGGATATGGAGATTACTCTCCTCGGGTTTGGAAGTTGGGCGATCGGGGGCGGCAA TTGGGCTTACGGATGGGGAGCTCAGAATGATCAGGATGCTGTGGAGGCTATCGTTCGGGCTGTAGATCTCGGCATGAACT GGATTGATACAGCGGCGGTTTACGGGCTCGGCCATGCAGAAGAGCTGGTGGGCAGGGCAGTTGCTTCAATGCAGGAAAAA CCGTTTATTTTTACCAAATGCGCTCTGGTATGGGACGAAACCCGATCGGTCAGCAGTTCGCTCAAGGCGGGATCTGTACG CCGGGAATGTGAAGCGAGCCTTCAGCGACTGCAGGTGAACGCCATTGATCTCTATCAGATGCACTGGCCGGATCCGGATG AGGATATCGAGGAGGGCTGGCTGGAGATGGCAAAATTGCAGTCGGAAGGTCTTGTGCGGCATATCGGTGTTTCAAATTTT ACGGTTGCCCAGATGCAAAGGGCTCTTGCGATTGCGCCCATCGCTTCACTGCAGCCACCCTATTCCATGTTGCGCCGAGC TATTGAAAAGGAGATTCTTCCTTTCTGTTTCGATAACAACATCGGCGTTATTGTCTATTCCCCTATGTTGTCCGGTATGT TGAGCGGTGCCATGACAAAAGATCGCGCGGCGTCTTTTGCCAAAGATGACTGGCGACGAAATAACAGGGAGTTTCAGGAG CCAAGGCTTTCACGTAACCTTGAACTGGTTGAACTTCTCAGGCAGGTCGGAGCTCTTTACGGCAGATCCGCGGGTGAGGT TGCCATAGCCTGGGCGCTTCGCCATCCTGTGGTGACCGGCGTGATTGTTGGCGGACGCAACGCCCTTCAGGTGGAGGGTG TGATCGGGGCAGGGGAGTTTCTCCTATCAGATGAGGATGCCTCTCGGATAGAGTCGTTTATTGCCACGATGTACGCATAG
Upstream 100 bases:
>100_bases ACGAGCTGATTATCGGTCGTTCAAATACCGCTTTATTCTCTGAATCAGAATCCGAAGAGACCGACGAAACGGACCGGAAT AAACATAAACAGTCATTATA
Downstream 100 bases:
>100_bases GCAGAGCGCGCCTTTTCAGGGTCGGAATATCCGGTAATCGATATCGAACTTTTTTACCCGTAGTCCCATGATCCGGTCTG AAAGGCCAAGTTGTGCCGCT
Product: aldo/keto reductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLKRRLGNTDMEITLLGFGSWAIGGGNWAYGWGAQNDQDAVEAIVRAVDLGMNWIDTAAVYGLGHAEELVGRAVASMQEK PFIFTKCALVWDETRSVSSSLKAGSVRRECEASLQRLQVNAIDLYQMHWPDPDEDIEEGWLEMAKLQSEGLVRHIGVSNF TVAQMQRALAIAPIASLQPPYSMLRRAIEKEILPFCFDNNIGVIVYSPMLSGMLSGAMTKDRAASFAKDDWRRNNREFQE PRLSRNLELVELLRQVGALYGRSAGEVAIAWALRHPVVTGVIVGGRNALQVEGVIGAGEFLLSDEDASRIESFIATMYA
Sequences:
>Translated_319_residues MLKRRLGNTDMEITLLGFGSWAIGGGNWAYGWGAQNDQDAVEAIVRAVDLGMNWIDTAAVYGLGHAEELVGRAVASMQEK PFIFTKCALVWDETRSVSSSLKAGSVRRECEASLQRLQVNAIDLYQMHWPDPDEDIEEGWLEMAKLQSEGLVRHIGVSNF TVAQMQRALAIAPIASLQPPYSMLRRAIEKEILPFCFDNNIGVIVYSPMLSGMLSGAMTKDRAASFAKDDWRRNNREFQE PRLSRNLELVELLRQVGALYGRSAGEVAIAWALRHPVVTGVIVGGRNALQVEGVIGAGEFLLSDEDASRIESFIATMYA >Mature_319_residues MLKRRLGNTDMEITLLGFGSWAIGGGNWAYGWGAQNDQDAVEAIVRAVDLGMNWIDTAAVYGLGHAEELVGRAVASMQEK PFIFTKCALVWDETRSVSSSLKAGSVRRECEASLQRLQVNAIDLYQMHWPDPDEDIEEGWLEMAKLQSEGLVRHIGVSNF TVAQMQRALAIAPIASLQPPYSMLRRAIEKEILPFCFDNNIGVIVYSPMLSGMLSGAMTKDRAASFAKDDWRRNNREFQE PRLSRNLELVELLRQVGALYGRSAGEVAIAWALRHPVVTGVIVGGRNALQVEGVIGAGEFLLSDEDASRIESFIATMYA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=328, Percent_Identity=26.8292682926829, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI4504825, Length=325, Percent_Identity=26.7692307692308, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI27436966, Length=313, Percent_Identity=24.2811501597444, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI27436962, Length=313, Percent_Identity=24.2811501597444, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI27436964, Length=313, Percent_Identity=24.2811501597444, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI27436971, Length=317, Percent_Identity=23.6593059936909, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI223718702, Length=298, Percent_Identity=28.5234899328859, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI41152114, Length=299, Percent_Identity=27.0903010033445, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI223468663, Length=337, Percent_Identity=23.7388724035608, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI41327764, Length=277, Percent_Identity=28.5198555956679, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI24497577, Length=338, Percent_Identity=25.1479289940828, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI5174391, Length=338, Percent_Identity=25.1479289940828, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=34.1614906832298, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI87081735, Length=318, Percent_Identity=27.0440251572327, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1788081, Length=263, Percent_Identity=29.277566539924, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI1789375, Length=337, Percent_Identity=25.8160237388724, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=25.2873563218391, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI87082198, Length=207, Percent_Identity=29.951690821256, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786400, Length=149, Percent_Identity=31.5436241610738, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787674, Length=223, Percent_Identity=27.3542600896861, Blast_Score=68, Evalue=6e-13, Organism=Caenorhabditis elegans, GI212645785, Length=174, Percent_Identity=29.8850574712644, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17550248, Length=210, Percent_Identity=25.7142857142857, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=338, Percent_Identity=25.4437869822485, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6320576, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320079, Length=292, Percent_Identity=25.6849315068493, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24662789, Length=228, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24644950, Length=324, Percent_Identity=25.6172839506173, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24657054, Length=311, Percent_Identity=24.1157556270096, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24646155, Length=229, Percent_Identity=29.2576419213974, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI21356425, Length=230, Percent_Identity=27.8260869565217, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24640980, Length=325, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI20129731, Length=195, Percent_Identity=29.7435897435897, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24662781, Length=228, Percent_Identity=28.5087719298246, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45549126, Length=327, Percent_Identity=23.8532110091743, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35237; Mature: 35237
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRRLGNTDMEITLLGFGSWAIGGGNWAYGWGAQNDQDAVEAIVRAVDLGMNWIDTAAV CCCCCCCCCCCEEEEEEECCEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHH YGLGHAEELVGRAVASMQEKPFIFTKCALVWDETRSVSSSLKAGSVRRECEASLQRLQVN HCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC AIDLYQMHWPDPDEDIEEGWLEMAKLQSEGLVRHIGVSNFTVAQMQRALAIAPIASLQPP CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCC YSMLRRAIEKEILPFCFDNNIGVIVYSPMLSGMLSGAMTKDRAASFAKDDWRRNNREFQE HHHHHHHHHHHHCCEEECCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHC PRLSRNLELVELLRQVGALYGRSAGEVAIAWALRHPVVTGVIVGGRNALQVEGVIGAGEF HHHHCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCEEEEEECCCCEEEEEEEEECCCE LLSDEDASRIESFIATMYA EECCCHHHHHHHHHHHHCC >Mature Secondary Structure MLKRRLGNTDMEITLLGFGSWAIGGGNWAYGWGAQNDQDAVEAIVRAVDLGMNWIDTAAV CCCCCCCCCCCEEEEEEECCEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHH YGLGHAEELVGRAVASMQEKPFIFTKCALVWDETRSVSSSLKAGSVRRECEASLQRLQVN HCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC AIDLYQMHWPDPDEDIEEGWLEMAKLQSEGLVRHIGVSNFTVAQMQRALAIAPIASLQPP CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCC YSMLRRAIEKEILPFCFDNNIGVIVYSPMLSGMLSGAMTKDRAASFAKDDWRRNNREFQE HHHHHHHHHHHHCCEEECCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHC PRLSRNLELVELLRQVGALYGRSAGEVAIAWALRHPVVTGVIVGGRNALQVEGVIGAGEF HHHHCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCEEEEEECCCCEEEEEEEEECCCE LLSDEDASRIESFIATMYA EECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]