| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is paeR7IM [H]
Identifier: 119357705
GI number: 119357705
Start: 2216323
End: 2217996
Strand: Reverse
Name: paeR7IM [H]
Synonym: Cpha266_1909
Alternate gene names: 119357705
Gene position: 2217996-2216323 (Counterclockwise)
Preceding gene: 119357706
Following gene: 119357704
Centisome position: 70.77
GC content: 50.06
Gene sequence:
>1674_bases ATGGTCGTTGCTGCGATTGAAAAATTGTCTTCAGCAGCAGGAACCGATTCTCGCGGCGCTATATTTACACGCGTTGAAGT AGTTGATTTTATTCTCGATCTGGCCGGCTATACGGAGGATCAATTGCTCCATGAAAAACGGCTTTTAGAGCCATCATTCG GTGGCGGTGACTTTCTTTTGCCGGCAATTGATCGATTACTGGCAGCGTGGAAATCATCGCAACATGTAACATCTGTCGTC GAAGAGTTAGGTGATGCAATTCGCGCTGTTGAGCTTCATCACAAGACCTTTTCTTCCACCCGTGCAGCCGTGATCGAGAA GTTACGACTGGAATCGATAGATGTTCAATGCGCAGCAACACTTGCTGATCGTTGGCTTGTTCATGGGGATTTTCTGCTTT CTCCACTTGACGGGCATTTTGACTTTATTGTCGGGAACCCGCCCTATGTGCGCCAGGAGCTTATTCCGGCAGCGTTACTG GCTGAATATCGCAATCGATATCAGACGATGTATGACCGGGCCGATATTTATATTCCGTTCATCGAGCGTTCCCTTTCAGT ATTGGGCAAGGGTGGGAGCCTGGGTTTTATCTGTGCGGATCGCTGGATGAAAAACCGCTATGGCGGTCCGCTTCGCAGCC TTGTGGCCAATCAGTTTCACCTGAAAATTTATGTTGATATGGTAGATACGCCAGCGTTTCTCTCTGATGTGATAGCCTAT CCAGCCATCACTATTATCAGCAGGGAAACTCCCGGTGCGACACGCATTGCTCATCGTCCGGCCATCGACAGAGATACGTT GGCAAACCTGGCTGATGCGCTGTGTGCTTCGAACCAGCTGAATGAGGTCGATTCGATAAGCGAACTGGCACAAGTTACTA ATGGTGCAGAACCCTGGTTACTCGAATCTTCGGATCAGATGGCCCTGATCCGTCGTCTGGAAAAACAATTTCCCAGCCTG GAAGAGGTTGGATGCAAGGTGGGTATAGGAGTGGCAACTGGCGCGGACAAAGCATATATCGGAGACTTTGATACACTCGA CGTGGAGCCTGATCGCAAACTGCCGCTGGTTACAACCAAAGATATTCTGTCAGGAGAAGTGCAATGGCGCGGTCAAGGTG TCATCAATCCTTTTGTCGAGGGTGGTGGTCTTGTTGAGTTGAGGAGTTATCCCCGCTTGCGTCGCTACCTGGAGGCTCGA CGAGACGTTATTATGGACCGACATTGTGCACGAAAGTCTCCGGATAACTGGTATCGCACAATCGACAGGATCACCCCTGC ACTGGCATCAAGGCCGAAACTCCTGATTCCCGATATCAAGGGAGAGGCTCATGTCGTTTATGAAGGAGGTGCACTTTATC CTCACCATAATCTTTACTATGTTACGTCCGACGAGTGGGAGTTGAGGGCATTGCAAGCTGTGTTGCTTTCAGACGTCACC CGTCTGTTCATGTCAACCTACTCCACCAGAATGCGTGGAGGCTACCTCCGGTTTCAGGCGCAGTACCTGCGTCGCATCCG CATTCCTCAATGGGCGAATGTTTCGATAATGTTGCGGAAGGCGCTTGCGGAAGCTGCAATCATGAGGGATTTTCCTGCTT GCAATCGCGCAGTATTCAAGCTATTTGAACTTGGCAATAACGAACGATCCGCCCTTGGAGGCAATGGAGAATAA
Upstream 100 bases:
>100_bases GATTGAACCAATGCGCAAAGGTTAAATAGTATGTATGCACAAAGTTTCGAGACAACTTGATTTTGACTTTTTTGGCGAGT CAGATTGTACTCATTCGCCG
Downstream 100 bases:
>100_bases ATGACTCTTGATCTTGTCAATTACGAACAAAAGGCACATGAAGCCGTAAAATCCTTCTGGAGTAATCGTGAGGTGGCGAA GCAAAAGCAGCTCCTGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: M.PaeR7I; Adenine-specific methyltransferase PaeR7I [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MVVAAIEKLSSAAGTDSRGAIFTRVEVVDFILDLAGYTEDQLLHEKRLLEPSFGGGDFLLPAIDRLLAAWKSSQHVTSVV EELGDAIRAVELHHKTFSSTRAAVIEKLRLESIDVQCAATLADRWLVHGDFLLSPLDGHFDFIVGNPPYVRQELIPAALL AEYRNRYQTMYDRADIYIPFIERSLSVLGKGGSLGFICADRWMKNRYGGPLRSLVANQFHLKIYVDMVDTPAFLSDVIAY PAITIISRETPGATRIAHRPAIDRDTLANLADALCASNQLNEVDSISELAQVTNGAEPWLLESSDQMALIRRLEKQFPSL EEVGCKVGIGVATGADKAYIGDFDTLDVEPDRKLPLVTTKDILSGEVQWRGQGVINPFVEGGGLVELRSYPRLRRYLEAR RDVIMDRHCARKSPDNWYRTIDRITPALASRPKLLIPDIKGEAHVVYEGGALYPHHNLYYVTSDEWELRALQAVLLSDVT RLFMSTYSTRMRGGYLRFQAQYLRRIRIPQWANVSIMLRKALAEAAIMRDFPACNRAVFKLFELGNNERSALGGNGE
Sequences:
>Translated_557_residues MVVAAIEKLSSAAGTDSRGAIFTRVEVVDFILDLAGYTEDQLLHEKRLLEPSFGGGDFLLPAIDRLLAAWKSSQHVTSVV EELGDAIRAVELHHKTFSSTRAAVIEKLRLESIDVQCAATLADRWLVHGDFLLSPLDGHFDFIVGNPPYVRQELIPAALL AEYRNRYQTMYDRADIYIPFIERSLSVLGKGGSLGFICADRWMKNRYGGPLRSLVANQFHLKIYVDMVDTPAFLSDVIAY PAITIISRETPGATRIAHRPAIDRDTLANLADALCASNQLNEVDSISELAQVTNGAEPWLLESSDQMALIRRLEKQFPSL EEVGCKVGIGVATGADKAYIGDFDTLDVEPDRKLPLVTTKDILSGEVQWRGQGVINPFVEGGGLVELRSYPRLRRYLEAR RDVIMDRHCARKSPDNWYRTIDRITPALASRPKLLIPDIKGEAHVVYEGGALYPHHNLYYVTSDEWELRALQAVLLSDVT RLFMSTYSTRMRGGYLRFQAQYLRRIRIPQWANVSIMLRKALAEAAIMRDFPACNRAVFKLFELGNNERSALGGNGE >Mature_557_residues MVVAAIEKLSSAAGTDSRGAIFTRVEVVDFILDLAGYTEDQLLHEKRLLEPSFGGGDFLLPAIDRLLAAWKSSQHVTSVV EELGDAIRAVELHHKTFSSTRAAVIEKLRLESIDVQCAATLADRWLVHGDFLLSPLDGHFDFIVGNPPYVRQELIPAALL AEYRNRYQTMYDRADIYIPFIERSLSVLGKGGSLGFICADRWMKNRYGGPLRSLVANQFHLKIYVDMVDTPAFLSDVIAY PAITIISRETPGATRIAHRPAIDRDTLANLADALCASNQLNEVDSISELAQVTNGAEPWLLESSDQMALIRRLEKQFPSL EEVGCKVGIGVATGADKAYIGDFDTLDVEPDRKLPLVTTKDILSGEVQWRGQGVINPFVEGGGLVELRSYPRLRRYLEAR RDVIMDRHCARKSPDNWYRTIDRITPALASRPKLLIPDIKGEAHVVYEGGALYPHHNLYYVTSDEWELRALQAVLLSDVT RLFMSTYSTRMRGGYLRFQAQYLRRIRIPQWANVSIMLRKALAEAAIMRDFPACNRAVFKLFELGNNERSALGGNGE
Specific function: This methylase recognizes the double-stranded sequence CTCGAG, causes specific methylation on A-5 on both strands, and protects the DNA from cleavage by the PaeR7I endonuclease [H]
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR011639 [H]
Pfam domain/function: PF07669 Eco57I [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 62352; Mature: 62352
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAAIEKLSSAAGTDSRGAIFTRVEVVDFILDLAGYTEDQLLHEKRLLEPSFGGGDFLL CCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHH PAIDRLLAAWKSSQHVTSVVEELGDAIRAVELHHKTFSSTRAAVIEKLRLESIDVQCAAT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LADRWLVHGDFLLSPLDGHFDFIVGNPPYVRQELIPAALLAEYRNRYQTMYDRADIYIPF HHHHHEEECCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH IERSLSVLGKGGSLGFICADRWMKNRYGGPLRSLVANQFHLKIYVDMVDTPAFLSDVIAY HHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHCCCEEEEEEEEECCCHHHHHHHHHH PAITIISRETPGATRIAHRPAIDRDTLANLADALCASNQLNEVDSISELAQVTNGAEPWL CEEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE LESSDQMALIRRLEKQFPSLEEVGCKVGIGVATGADKAYIGDFDTLDVEPDRKLPLVTTK ECCCCHHHHHHHHHHHCCCHHHCCCEEECEEECCCCCCEECCCCCCCCCCCCCCCEEEEH DILSGEVQWRGQGVINPFVEGGGLVELRSYPRLRRYLEARRDVIMDRHCARKSPDNWYRT HHHCCCEEECCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IDRITPALASRPKLLIPDIKGEAHVVYEGGALYPHHNLYYVTSDEWELRALQAVLLSDVT HHHHHHHHHCCCCEEEECCCCCEEEEEECCEECCCCCEEEEECCCHHHHHHHHHHHHHHH RLFMSTYSTRMRGGYLRFQAQYLRRIRIPQWANVSIMLRKALAEAAIMRDFPACNRAVFK HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH LFELGNNERSALGGNGE HHHCCCCCCCCCCCCCC >Mature Secondary Structure MVVAAIEKLSSAAGTDSRGAIFTRVEVVDFILDLAGYTEDQLLHEKRLLEPSFGGGDFLL CCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHH PAIDRLLAAWKSSQHVTSVVEELGDAIRAVELHHKTFSSTRAAVIEKLRLESIDVQCAAT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LADRWLVHGDFLLSPLDGHFDFIVGNPPYVRQELIPAALLAEYRNRYQTMYDRADIYIPF HHHHHEEECCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH IERSLSVLGKGGSLGFICADRWMKNRYGGPLRSLVANQFHLKIYVDMVDTPAFLSDVIAY HHHHHHHHCCCCCEEEEEHHHHHHHCCCCHHHHHHCCCEEEEEEEEECCCHHHHHHHHHH PAITIISRETPGATRIAHRPAIDRDTLANLADALCASNQLNEVDSISELAQVTNGAEPWL CEEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCE LESSDQMALIRRLEKQFPSLEEVGCKVGIGVATGADKAYIGDFDTLDVEPDRKLPLVTTK ECCCCHHHHHHHHHHHCCCHHHCCCEEECEEECCCCCCEECCCCCCCCCCCCCCCEEEEH DILSGEVQWRGQGVINPFVEGGGLVELRSYPRLRRYLEARRDVIMDRHCARKSPDNWYRT HHHCCCEEECCCCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IDRITPALASRPKLLIPDIKGEAHVVYEGGALYPHHNLYYVTSDEWELRALQAVLLSDVT HHHHHHHHHCCCCEEEECCCCCEEEEEECCEECCCCCEEEEECCCHHHHHHHHHHHHHHH RLFMSTYSTRMRGGYLRFQAQYLRRIRIPQWANVSIMLRKALAEAAIMRDFPACNRAVFK HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH LFELGNNERSALGGNGE HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3001639; 7607512 [H]