| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357672
Identifier: 119357672
GI number: 119357672
Start: 2173689
End: 2174426
Strand: Direct
Name: 119357672
Synonym: Cpha266_1876
Alternate gene names: NA
Gene position: 2173689-2174426 (Clockwise)
Preceding gene: 119357667
Following gene: 119357673
Centisome position: 69.36
GC content: 46.75
Gene sequence:
>738_bases ATGAAAAAAGTACTGCTCCTTATGATGATCCTGCTCGCCTCTCTTACCGAATCCGCATTCAGCGCATCGAAATTTACCGG ACTGATGGATATGATGCTGACCATGCCAAACGGAACCGGCAAAATCAGCTACTATTTCGGAACCGGCGAACAACGAATGG ACATGATCATGCAGTTGAAAAAAGTTCCGGATCCACTCAAAACCACTGTTATCACAAAAGCTTCACGTCCCGATGAGGCC GTAATTGTCAACCACAAAGCAAAAAGCTATAGTTTTGTCAACCTCAGAACTGCCGCCGAAAACGCCACACTCCTTGATTT CGACAGTAACTACACCCTGCAGAAACTCGGTAAAACAGTTGTTAAAGGATACCAGTGCGACCACATCGCCTTGACCAGCT CGACCGAAAAACTCGAACTCTGGGTCACCCGTGACCTTGGAGATTTCTCAACCTTCAGACTCCTGCAAACCCAGAACCCC CGTCTGTCGAACACCTCGCTCTCACGAACGCTAAAAGATGAGGCTGTCGATGGATTTCCTGTAAAAATAGTTCAAAAAAA CCTGAACGGACTCTACATCATGGACCTGATTCAGATTACGCCAAAAAGCGTTCCGTTGTCAGAGTTCAGCATCCCGTCAG GCTACACCAAAGTCACATCCAACATCAAACCCCTGAGCAGCAGCGAGAAAGCGCACCTTCGGGAGCTTATGGAAAAAATG AAAAAATTTGAAAAGTAG
Upstream 100 bases:
>100_bases AAAAATAATTCGTTAGTTTCCCTGATGATAACAACTGCAACAGCAGGAAATGCAAAAGATACAATAATCCTGATACTAAT AACCTATTGTGAGAAAGACC
Downstream 100 bases:
>100_bases GTTGTATATTTCGAGCCCTTGATCTTCATGAATCGCACGAACCAATTCCTAACGTGGCAGAAAAAATAACAACCCGCAGC GCAGACTACTCCCAGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKVLLLMMILLASLTESAFSASKFTGLMDMMLTMPNGTGKISYYFGTGEQRMDMIMQLKKVPDPLKTTVITKASRPDEA VIVNHKAKSYSFVNLRTAAENATLLDFDSNYTLQKLGKTVVKGYQCDHIALTSSTEKLELWVTRDLGDFSTFRLLQTQNP RLSNTSLSRTLKDEAVDGFPVKIVQKNLNGLYIMDLIQITPKSVPLSEFSIPSGYTKVTSNIKPLSSSEKAHLRELMEKM KKFEK
Sequences:
>Translated_245_residues MKKVLLLMMILLASLTESAFSASKFTGLMDMMLTMPNGTGKISYYFGTGEQRMDMIMQLKKVPDPLKTTVITKASRPDEA VIVNHKAKSYSFVNLRTAAENATLLDFDSNYTLQKLGKTVVKGYQCDHIALTSSTEKLELWVTRDLGDFSTFRLLQTQNP RLSNTSLSRTLKDEAVDGFPVKIVQKNLNGLYIMDLIQITPKSVPLSEFSIPSGYTKVTSNIKPLSSSEKAHLRELMEKM KKFEK >Mature_245_residues MKKVLLLMMILLASLTESAFSASKFTGLMDMMLTMPNGTGKISYYFGTGEQRMDMIMQLKKVPDPLKTTVITKASRPDEA VIVNHKAKSYSFVNLRTAAENATLLDFDSNYTLQKLGKTVVKGYQCDHIALTSSTEKLELWVTRDLGDFSTFRLLQTQNP RLSNTSLSRTLKDEAVDGFPVKIVQKNLNGLYIMDLIQITPKSVPLSEFSIPSGYTKVTSNIKPLSSSEKAHLRELMEKM KKFEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27522; Mature: 27522
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLLMMILLASLTESAFSASKFTGLMDMMLTMPNGTGKISYYFGTGEQRMDMIMQLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHH KVPDPLKTTVITKASRPDEAVIVNHKAKSYSFVNLRTAAENATLLDFDSNYTLQKLGKTV HCCCCHHHEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHH VKGYQCDHIALTSSTEKLELWVTRDLGDFSTFRLLQTQNPRLSNTSLSRTLKDEAVDGFP HCCCCCCEEEEECCCCEEEEEEECCCCCCHHEEEEECCCCCCCCCHHHHHHHHHCCCCCC VKIVQKNLNGLYIMDLIQITPKSVPLSEFSIPSGYTKVTSNIKPLSSSEKAHLRELMEKM CEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHH KKFEK HHHCC >Mature Secondary Structure MKKVLLLMMILLASLTESAFSASKFTGLMDMMLTMPNGTGKISYYFGTGEQRMDMIMQLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHH KVPDPLKTTVITKASRPDEAVIVNHKAKSYSFVNLRTAAENATLLDFDSNYTLQKLGKTV HCCCCHHHEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHH VKGYQCDHIALTSSTEKLELWVTRDLGDFSTFRLLQTQNPRLSNTSLSRTLKDEAVDGFP HCCCCCCEEEEECCCCEEEEEEECCCCCCHHEEEEECCCCCCCCCHHHHHHHHHCCCCCC VKIVQKNLNGLYIMDLIQITPKSVPLSEFSIPSGYTKVTSNIKPLSSSEKAHLRELMEKM CEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHH KKFEK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA