| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357645
Identifier: 119357645
GI number: 119357645
Start: 2142687
End: 2144033
Strand: Reverse
Name: 119357645
Synonym: Cpha266_1849
Alternate gene names: NA
Gene position: 2144033-2142687 (Counterclockwise)
Preceding gene: 119357646
Following gene: 119357644
Centisome position: 68.41
GC content: 48.48
Gene sequence:
>1347_bases ATGAAGCAACTTAACCTGATCCGCCTCTCCCTTTTCCAGATGGGTTTTGGAATCATGCTCGGTTTTCTGCATGATACCCT GAACCGGGTCATGACTACGGATCTTGGCATCTCCTCAACCATTGTGTTTGGCCTCATCAGCCTGAAGGAGCTGCTTGCGA TATTCGGCGTCAAGGTCTGGGCTGGCAACATGTCCGATCGCGCGAATCTTTTCGGTCTGAAACGCACACCCTATATTCTG CTTGGGCTTTTTTTCTGTGTTTTTTCCTTTATGCTCTCTCCTGCGGCAGCCTATGAGGTAACTGTCGCCGGAAAAAGTTT TTCTGAACTTTTTCCGGCCATATTTACCGATATCGGTCTGTTGAAGCTTGCGGTCATTTTTCTTCTGTTTGGTTTTGGAT TGCAGGTTGCCACAACAGCCTACTATGCGCTTCTTGCCGATACGGTTGGTGAAGAGAACATTGGCAAGGTTACCGGTGCA AGCTGGACTCTCATGGTTCTTACTACCATTATTGCTACAAGGGTTGTCGGCTCGTTTCTCGATGTCTATACCCCCGAAAG GCTTATTACTGTTGCTGAAGTTGGTGGATCGATAGCGCTCTGTATCGGGCTTTTTGCCGTACTCGGTATTGAAAAGCGAA ATGTAGTTCCTTCAGAGGGCAAGAGCAGGCACTCCATCTCTTTTTCACAGTCACTGAAACTGCTCTCTTCATCACCGAAA ACCCTGCTGTTTGCTTTTTATATCTTTATCTCGATTTTTGCGCTCTTTGCCAATGAAATTGTCATGGACCCTTTTGGAGG CGATGTATTCGGCATGCCGGTCGGTACAACTACCAAGCTGTTCCGGCCGACAATGGGTGGTACGCAGTTGATTTTCATGC TGATCGTGGGATTTCTGCTCAACAGGATCGGTCAGAAGCGAGGCGCGCATATCGGCAATTTTTTTGGTATTATCGGCTTC AGCATGCTGATTGCCGCCGGCTTCATGCGCGATGAACAGTTCCTTCGCATTGCGCTTGTCGTAACCGGCATAGGGCTTGG AGCGGCCAGCGTATCCAATATCTCCATGATGATGACCATGACGGCAGGTCGCAGCGGTATCTATATAGGCCTCTGGGGTA CAGCGCAAAGCCTCGCTATTTTTATCGGGCATTTCGGAGCGGGTATTATTCGTGACGTGGTTTATCACCTTTCCGGAGCT TATGTCTGGGCTTATGCCGCTATATTTTTAATGGAAATTATTGCCTTTACGATATCGAGCCTTGTTCTGCCCCATATTTC GAAAGAGGCGTTCGAAGCCGAAAGCAAAGCGAAAATCGCTGAACTGCAACCAGCAGAAGGGGGTTGA
Upstream 100 bases:
>100_bases CTTTTTTGTTATATTCGATCCCGGGCTATCCGGAGGGACTCAAAGCCTGTAAACATGTATTGGTGTTATCTGATATTTCC GTAAACATTAGAGCTCTTTC
Downstream 100 bases:
>100_bases GGTCATGCCGCTCGACAGAAAAAGGGAGGGAACTTCCATGAAACATGTGTTCGGCCCGGTTCCCTCAAAAAGGCTCGGGC AGTCGCTCGGTATCGATCTC
Product: PUCC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKQLNLIRLSLFQMGFGIMLGFLHDTLNRVMTTDLGISSTIVFGLISLKELLAIFGVKVWAGNMSDRANLFGLKRTPYIL LGLFFCVFSFMLSPAAAYEVTVAGKSFSELFPAIFTDIGLLKLAVIFLLFGFGLQVATTAYYALLADTVGEENIGKVTGA SWTLMVLTTIIATRVVGSFLDVYTPERLITVAEVGGSIALCIGLFAVLGIEKRNVVPSEGKSRHSISFSQSLKLLSSSPK TLLFAFYIFISIFALFANEIVMDPFGGDVFGMPVGTTTKLFRPTMGGTQLIFMLIVGFLLNRIGQKRGAHIGNFFGIIGF SMLIAAGFMRDEQFLRIALVVTGIGLGAASVSNISMMMTMTAGRSGIYIGLWGTAQSLAIFIGHFGAGIIRDVVYHLSGA YVWAYAAIFLMEIIAFTISSLVLPHISKEAFEAESKAKIAELQPAEGG
Sequences:
>Translated_448_residues MKQLNLIRLSLFQMGFGIMLGFLHDTLNRVMTTDLGISSTIVFGLISLKELLAIFGVKVWAGNMSDRANLFGLKRTPYIL LGLFFCVFSFMLSPAAAYEVTVAGKSFSELFPAIFTDIGLLKLAVIFLLFGFGLQVATTAYYALLADTVGEENIGKVTGA SWTLMVLTTIIATRVVGSFLDVYTPERLITVAEVGGSIALCIGLFAVLGIEKRNVVPSEGKSRHSISFSQSLKLLSSSPK TLLFAFYIFISIFALFANEIVMDPFGGDVFGMPVGTTTKLFRPTMGGTQLIFMLIVGFLLNRIGQKRGAHIGNFFGIIGF SMLIAAGFMRDEQFLRIALVVTGIGLGAASVSNISMMMTMTAGRSGIYIGLWGTAQSLAIFIGHFGAGIIRDVVYHLSGA YVWAYAAIFLMEIIAFTISSLVLPHISKEAFEAESKAKIAELQPAEGG >Mature_448_residues MKQLNLIRLSLFQMGFGIMLGFLHDTLNRVMTTDLGISSTIVFGLISLKELLAIFGVKVWAGNMSDRANLFGLKRTPYIL LGLFFCVFSFMLSPAAAYEVTVAGKSFSELFPAIFTDIGLLKLAVIFLLFGFGLQVATTAYYALLADTVGEENIGKVTGA SWTLMVLTTIIATRVVGSFLDVYTPERLITVAEVGGSIALCIGLFAVLGIEKRNVVPSEGKSRHSISFSQSLKLLSSSPK TLLFAFYIFISIFALFANEIVMDPFGGDVFGMPVGTTTKLFRPTMGGTQLIFMLIVGFLLNRIGQKRGAHIGNFFGIIGF SMLIAAGFMRDEQFLRIALVVTGIGLGAASVSNISMMMTMTAGRSGIYIGLWGTAQSLAIFIGHFGAGIIRDVVYHLSGA YVWAYAAIFLMEIIAFTISSLVLPHISKEAFEAESKAKIAELQPAEGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pucC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004896 [H]
Pfam domain/function: PF03209 PUCC [H]
EC number: NA
Molecular weight: Translated: 48374; Mature: 48374
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLNLIRLSLFQMGFGIMLGFLHDTLNRVMTTDLGISSTIVFGLISLKELLAIFGVKVW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHE AGNMSDRANLFGLKRTPYILLGLFFCVFSFMLSPAAAYEVTVAGKSFSELFPAIFTDIGL ECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHH LKLAVIFLLFGFGLQVATTAYYALLADTVGEENIGKVTGASWTLMVLTTIIATRVVGSFL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DVYTPERLITVAEVGGSIALCIGLFAVLGIEKRNVVPSEGKSRHSISFSQSLKLLSSSPK HHCCCHHHEEHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH TLLFAFYIFISIFALFANEIVMDPFGGDVFGMPVGTTTKLFRPTMGGTQLIFMLIVGFLL HHHHHHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHH NRIGQKRGAHIGNFFGIIGFSMLIAAGFMRDEQFLRIALVVTGIGLGAASVSNISMMMTM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCEEEEEE TAGRSGIYIGLWGTAQSLAIFIGHFGAGIIRDVVYHLSGAYVWAYAAIFLMEIIAFTISS ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LVLPHISKEAFEAESKAKIAELQPAEGG HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKQLNLIRLSLFQMGFGIMLGFLHDTLNRVMTTDLGISSTIVFGLISLKELLAIFGVKVW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHE AGNMSDRANLFGLKRTPYILLGLFFCVFSFMLSPAAAYEVTVAGKSFSELFPAIFTDIGL ECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHH LKLAVIFLLFGFGLQVATTAYYALLADTVGEENIGKVTGASWTLMVLTTIIATRVVGSFL HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DVYTPERLITVAEVGGSIALCIGLFAVLGIEKRNVVPSEGKSRHSISFSQSLKLLSSSPK HHCCCHHHEEHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH TLLFAFYIFISIFALFANEIVMDPFGGDVFGMPVGTTTKLFRPTMGGTQLIFMLIVGFLL HHHHHHHHHHHHHHHHHHHHEECCCCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHH NRIGQKRGAHIGNFFGIIGFSMLIAAGFMRDEQFLRIALVVTGIGLGAASVSNISMMMTM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCEEEEEE TAGRSGIYIGLWGTAQSLAIFIGHFGAGIIRDVVYHLSGAYVWAYAAIFLMEIIAFTISS ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LVLPHISKEAFEAESKAKIAELQPAEGG HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA