| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357634
Identifier: 119357634
GI number: 119357634
Start: 2097918
End: 2098346
Strand: Reverse
Name: 119357634
Synonym: Cpha266_1838
Alternate gene names: NA
Gene position: 2098346-2097918 (Counterclockwise)
Preceding gene: 119357635
Following gene: 119357632
Centisome position: 66.96
GC content: 46.15
Gene sequence:
>429_bases ATGGTCCATACTCGTCGTTTTGGCGATTTTTTGCTTGAGCAGGGAGCGTTCGATCTTATTGTGGCTTATGATGTTCTTGA GCATCTGCCCGATCTGGTTGCAGCAATGACATCCTGTCTCTCCTTGCTCAAAGAGGGCGGGGAAATGCATATTCAGGTTC CCTATGATCTCTCTTTTGGTGCATGGCAGGATCCAACTCATGTTCGGGCATTCAATGAGCGCAGTTGGCTTTACTATACG GATTGGCATTGGTATCTTGGATGGAAAACGGAGCGCTTTCATCTGGAAAAACAGCAGTTTGTGCTCTCTCCGGTGGGAAA GGCGCTGAAAGAACAGAAGATGGCGGTAGACGATATTATGCGTACACCAAAAGCAATTGACTCGATAGTGGTGGTTTTAA AAAAAATTACCATCGCGAACTCTCAATGA
Upstream 100 bases:
>100_bases GGCAAGGATTGGCGTGAGAATTTTCTGAATACTGATATTCTTGATCGGGTAAATCCTGATTGGACTTTGGATATTTGTTC CCCGTTACCTTGGGGGGGAG
Downstream 100 bases:
>100_bases CCTGATTTATTATCAAATAGCACAAAATCACTCTCCCCATTTATCGATATATGTGTTATAACTTTTTTTCCATTGTTCGG AGCCGAACGCTCCGCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MVHTRRFGDFLLEQGAFDLIVAYDVLEHLPDLVAAMTSCLSLLKEGGEMHIQVPYDLSFGAWQDPTHVRAFNERSWLYYT DWHWYLGWKTERFHLEKQQFVLSPVGKALKEQKMAVDDIMRTPKAIDSIVVVLKKITIANSQ
Sequences:
>Translated_142_residues MVHTRRFGDFLLEQGAFDLIVAYDVLEHLPDLVAAMTSCLSLLKEGGEMHIQVPYDLSFGAWQDPTHVRAFNERSWLYYT DWHWYLGWKTERFHLEKQQFVLSPVGKALKEQKMAVDDIMRTPKAIDSIVVVLKKITIANSQ >Mature_142_residues MVHTRRFGDFLLEQGAFDLIVAYDVLEHLPDLVAAMTSCLSLLKEGGEMHIQVPYDLSFGAWQDPTHVRAFNERSWLYYT DWHWYLGWKTERFHLEKQQFVLSPVGKALKEQKMAVDDIMRTPKAIDSIVVVLKKITIANSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16482; Mature: 16482
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHTRRFGDFLLEQGAFDLIVAYDVLEHLPDLVAAMTSCLSLLKEGGEMHIQVPYDLSFG CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC AWQDPTHVRAFNERSWLYYTDWHWYLGWKTERFHLEKQQFVLSPVGKALKEQKMAVDDIM CCCCCCHHEEECCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPKAIDSIVVVLKKITIANSQ HCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVHTRRFGDFLLEQGAFDLIVAYDVLEHLPDLVAAMTSCLSLLKEGGEMHIQVPYDLSFG CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC AWQDPTHVRAFNERSWLYYTDWHWYLGWKTERFHLEKQQFVLSPVGKALKEQKMAVDDIM CCCCCCHHEEECCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPKAIDSIVVVLKKITIANSQ HCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA