| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357625
Identifier: 119357625
GI number: 119357625
Start: 2085956
End: 2086309
Strand: Reverse
Name: 119357625
Synonym: Cpha266_1829
Alternate gene names: NA
Gene position: 2086309-2085956 (Counterclockwise)
Preceding gene: 119357626
Following gene: 119357624
Centisome position: 66.57
GC content: 47.18
Gene sequence:
>354_bases ATGAAGTTTCGTGTGGAAACATTGTCAGGAAAAAATATCGGTATTGCTGAGTTGAGTGGACGGCTTGATGCTGAAAACAG TGGTGCCTTGCAGACCTCTTTTGCGCTTTGGCAAAAACAGGCCGTTTTTTTTGTTTTTGACTGCATCAATCTTGAATTTG TTGACAGCAGCGGGTTGGGAGCTATTGTCGCGTGCCTTCGCAAGGCGCTTGAGCATAATGGCGATGTACGGCTCGCAGCC CTCGGTCCGAAAGTTTCCATGGTCTTCGATCTGACAAAGGCAAAAAAACTTTTTTCGATTTTTCCTGATACGTCAGGCGC AATACAATCATTCGGGACAGGCGGCGCGGCTTAA
Upstream 100 bases:
>100_bases AGTACATTCAAAGTGCCGGGTTTCTCAATGATATTCGCTTGCTTTTTAAAACAATCCCTGCCGTTCTGACCGGAAGGGGA GCATATTAAAGGAGAGTACC
Downstream 100 bases:
>100_bases CAAAACAGCTCCATGAAAACACTTGTCGTCATCAGAGAAAAGGATTATGAATGGCTTTATCCTGTTTTTCCGGGCGTTCA TCCACTGCTCGTTCCGGTAT
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Anti- Anti-Sigma Regulatory Factor; Anti-Anti-Sigma Regulatory Factor SpoIIAA; Anti-Anti-Sigma Factor
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKFRVETLSGKNIGIAELSGRLDAENSGALQTSFALWQKQAVFFVFDCINLEFVDSSGLGAIVACLRKALEHNGDVRLAA LGPKVSMVFDLTKAKKLFSIFPDTSGAIQSFGTGGAA
Sequences:
>Translated_117_residues MKFRVETLSGKNIGIAELSGRLDAENSGALQTSFALWQKQAVFFVFDCINLEFVDSSGLGAIVACLRKALEHNGDVRLAA LGPKVSMVFDLTKAKKLFSIFPDTSGAIQSFGTGGAA >Mature_117_residues MKFRVETLSGKNIGIAELSGRLDAENSGALQTSFALWQKQAVFFVFDCINLEFVDSSGLGAIVACLRKALEHNGDVRLAA LGPKVSMVFDLTKAKKLFSIFPDTSGAIQSFGTGGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12430; Mature: 12430
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRVETLSGKNIGIAELSGRLDAENSGALQTSFALWQKQAVFFVFDCINLEFVDSSGLG CCEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECEEEEECCCCCH AIVACLRKALEHNGDVRLAALGPKVSMVFDLTKAKKLFSIFPDTSGAIQSFGTGGAA HHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHHHHHHHCCCCCCCHHHHCCCCCCC >Mature Secondary Structure MKFRVETLSGKNIGIAELSGRLDAENSGALQTSFALWQKQAVFFVFDCINLEFVDSSGLG CCEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECEEEEECCCCCH AIVACLRKALEHNGDVRLAALGPKVSMVFDLTKAKKLFSIFPDTSGAIQSFGTGGAA HHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHHHHHHHCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA