| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357622
Identifier: 119357622
GI number: 119357622
Start: 2083765
End: 2084208
Strand: Reverse
Name: 119357622
Synonym: Cpha266_1826
Alternate gene names: NA
Gene position: 2084208-2083765 (Counterclockwise)
Preceding gene: 119357623
Following gene: 119357621
Centisome position: 66.51
GC content: 46.4
Gene sequence:
>444_bases ATGACCACCATGATTACCATGACTCTGCCGGCGGAAATCCGATACGTTCGGCTTGCCTCACATACTGCCGCAAAGGTTGC GGAAATATTTTCGGCATCTTTTACCGCAGCAGATAATGCCGATGGATTCTGTCATGCTTTTGAGCTTTCTGTCAGTGAGG CGTTTACCAATGCGGTCCGTTATGCGGGCGCTTCCGATCAGGAGAACATGGTTACCATAAATTTTTATGGTGACCGCAAC AGACTTACTGTAAGTGTCAGCGATTCCAATCCTCCTTTTGATCCTGAATTCCCGTCTCCGGACATCAGCAGCTATCCCGA AAGAGGATTTGGTCTGTTACTGATACGCAGGCTTATGGATACGGTTACCTATACCAGAGAAGAGGGAAGAAATCTGATTT CAATGACAAAACAACCGGATAATCAGCGGTATGGAAATCCATAA
Upstream 100 bases:
>100_bases TCAGAAAGGTGTTTGAAATAACGCAGGCATACCGGTTATTTGATATTTATGATGATGTCGAAGCCGCATCTGTGAATGCC GGAAAAAAAAAGAATAGCTT
Downstream 100 bases:
>100_bases AAAATAAAAGGGGTTATCTATGGTATCCGTTGTTATTGTAAGCTTTAACACAAGGGAAATTCTTTCCAACTGCCTGCATG CCCTGTTTGAGCACACCAAG
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: RsbW Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTTMITMTLPAEIRYVRLASHTAAKVAEIFSASFTAADNADGFCHAFELSVSEAFTNAVRYAGASDQENMVTINFYGDRN RLTVSVSDSNPPFDPEFPSPDISSYPERGFGLLLIRRLMDTVTYTREEGRNLISMTKQPDNQRYGNP
Sequences:
>Translated_147_residues MTTMITMTLPAEIRYVRLASHTAAKVAEIFSASFTAADNADGFCHAFELSVSEAFTNAVRYAGASDQENMVTINFYGDRN RLTVSVSDSNPPFDPEFPSPDISSYPERGFGLLLIRRLMDTVTYTREEGRNLISMTKQPDNQRYGNP >Mature_146_residues TTMITMTLPAEIRYVRLASHTAAKVAEIFSASFTAADNADGFCHAFELSVSEAFTNAVRYAGASDQENMVTINFYGDRNR LTVSVSDSNPPFDPEFPSPDISSYPERGFGLLLIRRLMDTVTYTREEGRNLISMTKQPDNQRYGNP
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16388; Mature: 16257
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMITMTLPAEIRYVRLASHTAAKVAEIFSASFTAADNADGFCHAFELSVSEAFTNAVR CCEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHH YAGASDQENMVTINFYGDRNRLTVSVSDSNPPFDPEFPSPDISSYPERGFGLLLIRRLMD HCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH TVTYTREEGRNLISMTKQPDNQRYGNP HHHHHHHHCCCEEEECCCCCCCCCCCC >Mature Secondary Structure TTMITMTLPAEIRYVRLASHTAAKVAEIFSASFTAADNADGFCHAFELSVSEAFTNAVR CEEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHH YAGASDQENMVTINFYGDRNRLTVSVSDSNPPFDPEFPSPDISSYPERGFGLLLIRRLMD HCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH TVTYTREEGRNLISMTKQPDNQRYGNP HHHHHHHHCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA