| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is ucpA [C]
Identifier: 119357560
GI number: 119357560
Start: 2004827
End: 2005558
Strand: Direct
Name: ucpA [C]
Synonym: Cpha266_1763
Alternate gene names: 119357560
Gene position: 2004827-2005558 (Clockwise)
Preceding gene: 119357558
Following gene: 119357561
Centisome position: 63.97
GC content: 47.68
Gene sequence:
>732_bases ATGCAGCACATTATCATGATCACCGGTGCCGGTAAAGGAATAGGCCGGGCTATCGCTCTTGCGTTCGCAAAAGCCGGAAA AGAACAACCATCATTTGAACCGGTTCTCGTGCTCTCGTCAAGAACGGAGAGCGATCTGCGATCTCTGGCTTTCGAGTGTC AGGCTCACGGCGCCGAAACGTTGTGCATACAGGCTGATATTGCCGTTTCCGAAGAACGGGAAAAACTGGTTAAAAAAGCA GTTGAAAAGTACGGGACAATAGATTGTCTGATCAACAATGCGGGAGTAGGCCGATTCAAACCTTTTGGAGAAATGACGGA GGAAGATTTTGACTATACTGTCGCCACCAACCTTAAAGGCACTTTTTTTCTCACGCAAAGCGTTTTCAGAGCGATGGAGA AAAAAAAGTCGGGTCATATCTTTTTTATAACCTCCATTGCAGCGGAAAAGGCGTTCAAAAGCTCGACAATCTACTCCATG TCGAAATTCGGACAAAAGGGACTGCTTGAAGCTTTGCGACTCTATGCCGCAGAATCCAACATCAGAATCACCAACGTCAT GCCAGGCGCAGTCTTCACACCAATGTGGGGCGAAGTATCCGAAAACATGCAAGCCCTGATGATGAGGCCTGAAGATATTG CCGGCCCTGTTGTCAACACCTATCTTCTTCCCTCAAGAACAACAGTGGAAGAACTGGTCATAAGACCGGTTGGCGGCGAT ATCAACGAGTAA
Upstream 100 bases:
>100_bases GCAAAGCGGCCTGTCTGAAATATTCAACTCTCTTTTATCCCGCTCAAATGAAAAAAAAGTTTAAATATCGGGTTTTCCCC ATAACCATCCGTGAAAAACC
Downstream 100 bases:
>100_bases AGAAAGAGAACCCTGAACTCTGGGAAAGCATTATTTTTTCCTGTATTTTCCGATTCATTATTGTTCACTGAACATTAGAA GAACAACCATCATGAGTTTG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MQHIIMITGAGKGIGRAIALAFAKAGKEQPSFEPVLVLSSRTESDLRSLAFECQAHGAETLCIQADIAVSEEREKLVKKA VEKYGTIDCLINNAGVGRFKPFGEMTEEDFDYTVATNLKGTFFLTQSVFRAMEKKKSGHIFFITSIAAEKAFKSSTIYSM SKFGQKGLLEALRLYAAESNIRITNVMPGAVFTPMWGEVSENMQALMMRPEDIAGPVVNTYLLPSRTTVEELVIRPVGGD INE
Sequences:
>Translated_243_residues MQHIIMITGAGKGIGRAIALAFAKAGKEQPSFEPVLVLSSRTESDLRSLAFECQAHGAETLCIQADIAVSEEREKLVKKA VEKYGTIDCLINNAGVGRFKPFGEMTEEDFDYTVATNLKGTFFLTQSVFRAMEKKKSGHIFFITSIAAEKAFKSSTIYSM SKFGQKGLLEALRLYAAESNIRITNVMPGAVFTPMWGEVSENMQALMMRPEDIAGPVVNTYLLPSRTTVEELVIRPVGGD INE >Mature_243_residues MQHIIMITGAGKGIGRAIALAFAKAGKEQPSFEPVLVLSSRTESDLRSLAFECQAHGAETLCIQADIAVSEEREKLVKKA VEKYGTIDCLINNAGVGRFKPFGEMTEEDFDYTVATNLKGTFFLTQSVFRAMEKKKSGHIFFITSIAAEKAFKSSTIYSM SKFGQKGLLEALRLYAAESNIRITNVMPGAVFTPMWGEVSENMQALMMRPEDIAGPVVNTYLLPSRTTVEELVIRPVGGD INE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI4504505, Length=231, Percent_Identity=31.1688311688312, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI32483357, Length=230, Percent_Identity=32.1739130434783, Blast_Score=97, Evalue=9e-21, Organism=Homo sapiens, GI7705925, Length=192, Percent_Identity=32.2916666666667, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI4503817, Length=199, Percent_Identity=29.6482412060301, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI5031737, Length=227, Percent_Identity=29.0748898678414, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=29.8969072164948, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI19923817, Length=196, Percent_Identity=29.0816326530612, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=31.5217391304348, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI109715829, Length=250, Percent_Identity=24.8, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI40254992, Length=201, Percent_Identity=26.865671641791, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=27.4611398963731, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI15277342, Length=225, Percent_Identity=26.2222222222222, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7657478, Length=195, Percent_Identity=27.6923076923077, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI210032110, Length=169, Percent_Identity=26.6272189349112, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI142976729, Length=222, Percent_Identity=27.4774774774775, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI59889578, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=26.2626262626263, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI40254986, Length=169, Percent_Identity=27.810650887574, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI126723750, Length=229, Percent_Identity=27.0742358078603, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI31542939, Length=208, Percent_Identity=27.8846153846154, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI310128830, Length=232, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI310115468, Length=232, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI223718074, Length=217, Percent_Identity=25.3456221198157, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87082100, Length=208, Percent_Identity=32.6923076923077, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=32.9317269076305, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788459, Length=198, Percent_Identity=29.2929292929293, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787335, Length=202, Percent_Identity=29.2079207920792, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790717, Length=192, Percent_Identity=28.125, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1787820, Length=245, Percent_Identity=24.8979591836735, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082160, Length=184, Percent_Identity=27.7173913043478, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=26.953125, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787526, Length=197, Percent_Identity=26.3959390862944, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1789208, Length=230, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789378, Length=192, Percent_Identity=28.125, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115534694, Length=211, Percent_Identity=29.8578199052133, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193203115, Length=222, Percent_Identity=27.4774774774775, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193203117, Length=222, Percent_Identity=27.4774774774775, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994600, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193204405, Length=198, Percent_Identity=28.7878787878788, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17561402, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71994604, Length=196, Percent_Identity=29.0816326530612, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17564282, Length=205, Percent_Identity=27.8048780487805, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17567345, Length=218, Percent_Identity=27.9816513761468, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17560676, Length=197, Percent_Identity=26.9035532994924, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=29.2307692307692, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562910, Length=204, Percent_Identity=27.9411764705882, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560220, Length=194, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508895, Length=196, Percent_Identity=28.0612244897959, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71982365, Length=162, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562908, Length=198, Percent_Identity=26.7676767676768, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562906, Length=198, Percent_Identity=26.7676767676768, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25147288, Length=195, Percent_Identity=26.6666666666667, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17531453, Length=211, Percent_Identity=26.0663507109005, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17538480, Length=257, Percent_Identity=25.2918287937743, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551412, Length=200, Percent_Identity=26, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=185, Percent_Identity=29.7297297297297, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=30.0518134715026, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322226, Length=215, Percent_Identity=27.4418604651163, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643142, Length=192, Percent_Identity=32.2916666666667, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24644339, Length=193, Percent_Identity=28.4974093264249, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641232, Length=247, Percent_Identity=28.7449392712551, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI23397609, Length=209, Percent_Identity=29.1866028708134, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI28571526, Length=194, Percent_Identity=30.4123711340206, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI28571387, Length=249, Percent_Identity=28.1124497991968, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI21358495, Length=236, Percent_Identity=27.5423728813559, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI21357041, Length=194, Percent_Identity=28.3505154639175, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=28.6852589641434, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24663911, Length=257, Percent_Identity=27.2373540856031, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281364892, Length=237, Percent_Identity=24.8945147679325, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24641388, Length=254, Percent_Identity=27.5590551181102, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007236, Length=248, Percent_Identity=26.2096774193548, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI18859837, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24640492, Length=194, Percent_Identity=24.7422680412371, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI281364494, Length=249, Percent_Identity=28.5140562248996, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI116007234, Length=252, Percent_Identity=25.3968253968254, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355319, Length=203, Percent_Identity=26.1083743842365, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355631, Length=178, Percent_Identity=24.1573033707865, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26673; Mature: 26673
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHIIMITGAGKGIGRAIALAFAKAGKEQPSFEPVLVLSSRTESDLRSLAFECQAHGAET CCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEE LCIQADIAVSEEREKLVKKAVEKYGTIDCLINNAGVGRFKPFGEMTEEDFDYTVATNLKG EEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCE TFFLTQSVFRAMEKKKSGHIFFITSIAAEKAFKSSTIYSMSKFGQKGLLEALRLYAAESN EEHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC IRITNVMPGAVFTPMWGEVSENMQALMMRPEDIAGPVVNTYLLPSRTTVEELVIRPVGGD EEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHEEECCCCCCHHHHHEECCCCC INE CCC >Mature Secondary Structure MQHIIMITGAGKGIGRAIALAFAKAGKEQPSFEPVLVLSSRTESDLRSLAFECQAHGAET CCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEE LCIQADIAVSEEREKLVKKAVEKYGTIDCLINNAGVGRFKPFGEMTEEDFDYTVATNLKG EEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCE TFFLTQSVFRAMEKKKSGHIFFITSIAAEKAFKSSTIYSMSKFGQKGLLEALRLYAAESN EEHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC IRITNVMPGAVFTPMWGEVSENMQALMMRPEDIAGPVVNTYLLPSRTTVEELVIRPVGGD EEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHEEECCCCCCHHHHHEECCCCC INE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA