Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119357551

Identifier: 119357551

GI number: 119357551

Start: 1994857

End: 1995549

Strand: Reverse

Name: 119357551

Synonym: Cpha266_1754

Alternate gene names: NA

Gene position: 1995549-1994857 (Counterclockwise)

Preceding gene: 119357552

Following gene: 119357547

Centisome position: 63.68

GC content: 43.87

Gene sequence:

>693_bases
ATGAATGCATGGGCAGATGGTGACCCTGAAACGTTGAGGCTCAGCATTGACACGAAAGCGACTGTTCATGTTGGTCAATA
TTCACGAGGCAGCAGGTCTCGTGGAATCAAAGCTGTTGAGGCATGGGATCATGACATGCGACCTAAAGAGAAGCTTGTTC
CTGGTGGTATACTTGAACCTGTTAGCGGCAAATCGTTTTTGTTTTTCGGTAGCAGTAACAAGACCAGTGACTTTCTTGTT
GACGGTCTTGAGTTGTGGTGGAATGAACGTAAGTCAGAACTGTATAACGTCAAACAGTTGGTCATCAACATGGATAATGG
CCCGGAATGTAATGGACGGCGAAGTCAATTTCTGTACCGAATGACCATGTTTGCTGATATGACAGGGCTTAACATTAGAT
TGATTTATTATCCACCCTACCACAGTAAATATAACAGTATTGAGCGCTACTGGGCAGGGTTGGAAAAATCATGGAATGGC
TATCTCCTTGAAAGTGTGACAACAGTTATAAATCGTGCTGGTAACTTTGCTTGGAGAGGAATAGCCGCAAAGGCAAGGCT
TGTTGATACGGTGTACCAAAAGGGAGTCAAGCTCTGTGGTAAGGATAAAAAGAATCTGGAAAAACGACTGATGCGTTCAC
CCAGCCTTCATTGGTGGGATATCAGCATCAGCCCTAAAACGGTATTTTTATAA

Upstream 100 bases:

>100_bases
ATATTTTGAACCGTCAAAACTATCGATTACGTACTGTTCAGAAAACCAAGGTTGAAAAAAAACAGCAGAAACAGACGCGA
TCTTCCAAAACGTCTGGCAA

Downstream 100 bases:

>100_bases
TGACGGAGTCCCTTAGTTGTATGCGGCCGTTACGTTAAAGGTTCCGCTGTAGGTTCCGGATGGCTGATTCGCACCGACAT
GAAGCGTTCCGCCAACCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Rhodopirellula Transposase; Transposase Family Protein; Rhodopirellula Transposase Family Protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNAWADGDPETLRLSIDTKATVHVGQYSRGSRSRGIKAVEAWDHDMRPKEKLVPGGILEPVSGKSFLFFGSSNKTSDFLV
DGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYRMTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNG
YLLESVTTVINRAGNFAWRGIAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL

Sequences:

>Translated_230_residues
MNAWADGDPETLRLSIDTKATVHVGQYSRGSRSRGIKAVEAWDHDMRPKEKLVPGGILEPVSGKSFLFFGSSNKTSDFLV
DGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYRMTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNG
YLLESVTTVINRAGNFAWRGIAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL
>Mature_230_residues
MNAWADGDPETLRLSIDTKATVHVGQYSRGSRSRGIKAVEAWDHDMRPKEKLVPGGILEPVSGKSFLFFGSSNKTSDFLV
DGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYRMTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNG
YLLESVTTVINRAGNFAWRGIAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26451; Mature: 26451

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAWADGDPETLRLSIDTKATVHVGQYSRGSRSRGIKAVEAWDHDMRPKEKLVPGGILEP
CCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCC
VSGKSFLFFGSSNKTSDFLVDGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYR
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCCCCHHHHHHHH
MTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNGYLLESVTTVINRAGNFAWRG
HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHH
IAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEC
>Mature Secondary Structure
MNAWADGDPETLRLSIDTKATVHVGQYSRGSRSRGIKAVEAWDHDMRPKEKLVPGGILEP
CCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCC
VSGKSFLFFGSSNKTSDFLVDGLELWWNERKSELYNVKQLVINMDNGPECNGRRSQFLYR
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEHEEEECCCCCCCCCHHHHHHHH
MTMFADMTGLNIRLIYYPPYHSKYNSIERYWAGLEKSWNGYLLESVTTVINRAGNFAWRG
HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHH
IAAKARLVDTVYQKGVKLCGKDKKNLEKRLMRSPSLHWWDISISPKTVFL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA