Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357550

Identifier: 119357550

GI number: 119357550

Start: 1994305

End: 1994844

Strand: Direct

Name: 119357550

Synonym: Cpha266_1753

Alternate gene names: NA

Gene position: 1994305-1994844 (Clockwise)

Preceding gene: 119357549

Following gene: 119357553

Centisome position: 63.64

GC content: 49.07

Gene sequence:

>540_bases
GTGATTGCTAATTTCCGAAATTGGCTGATTTTTAATTTCCGACTACAGGCAGCCTTGTTCGCTTTTGGAAGCGATGCGCA
GGCAACAGTAGTTGGTGATAACGGAACCGCAACAGCAACGATTGCCGGCGCAATTTCTGTTGCCAAGTATGAAACAGGCT
CAACAACCGGTGGCGATCTGGCTTTCGGCAATATCATTGCAGGCCCTTCATCGGGAACCGTAACCATTAATCCTTTCGGC
TCCGGTTCGCGCTCCTTTACAACCGTATCGGGTACCAACCTTTTACCGTTCGGCCCTGCGCAATTTCAGGTAACCGGTGA
TGCAAATGCGAACTACACGGTATCGTTACCATCCTCGGATATCACTATTTACAGTGACACAAACACCATGACAGTGGATA
GCTTTACGAAAACCGTTACAACCGGAACGTTGACCAATGGTACTGATGTTTTCAGGGTTGGCGGAACGCTTCATGTCGGT
GCGAATCAGCCATCCGGAACCTACAGCGGAACCTTTAACGTAACGGCCGCATACAACTAA

Upstream 100 bases:

>100_bases
ATCGCCGGAAGGAGGGGGCAATCGTAGAAAAAAGCAACTACCACTTCAAAAAGGAGTAGGAAATCATTGCAAAATGACGT
AATCTGAAGCCGCTGCCTGG

Downstream 100 bases:

>100_bases
GGGACTCCGTCATTATAAAAATACCGTTTTAGGGCTGATGCTGATATCCCACCAATGAAGGCTGGGTGAACGCATCAGTC
GTTTTTCCAGATTCTTTTTA

Product: YapH protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDLAFGNIIAGPSSGTVTINPFG
SGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSDITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVG
ANQPSGTYSGTFNVTAAYN

Sequences:

>Translated_179_residues
MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDLAFGNIIAGPSSGTVTINPFG
SGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSDITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVG
ANQPSGTYSGTFNVTAAYN
>Mature_179_residues
MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDLAFGNIIAGPSSGTVTINPFG
SGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSDITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVG
ANQPSGTYSGTFNVTAAYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18341; Mature: 18341

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDL
CCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCE
AFGNIIAGPSSGTVTINPFGSGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSD
EECEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCC
ITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVGANQPSGTYSGTFNVTAAYN
EEEEECCCEEEECCCEEEEEECEECCCCEEEEECCEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MIANFRNWLIFNFRLQAALFAFGSDAQATVVGDNGTATATIAGAISVAKYETGSTTGGDL
CCCCCCEEEEEEEEEEEEEEEECCCCEEEEECCCCCEEEEEEEEEEEEEEECCCCCCCCE
AFGNIIAGPSSGTVTINPFGSGSRSFTTVSGTNLLPFGPAQFQVTGDANANYTVSLPSSD
EECEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCC
ITIYSDTNTMTVDSFTKTVTTGTLTNGTDVFRVGGTLHVGANQPSGTYSGTFNVTAAYN
EEEEECCCEEEECCCEEEEEECEECCCCEEEEECCEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA