| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357513
Identifier: 119357513
GI number: 119357513
Start: 1943652
End: 1944845
Strand: Direct
Name: 119357513
Synonym: Cpha266_1715
Alternate gene names: NA
Gene position: 1943652-1944845 (Clockwise)
Preceding gene: 119357501
Following gene: 119357514
Centisome position: 62.02
GC content: 49.33
Gene sequence:
>1194_bases TTGAAAAAACATGGTCAAACCGTATTTCTAATAACCATCAATCCGGTCGGCGTGATGGGTAAAGGGATCGCCCTGCAGTT CAAACATGCTTTTCCCGAGAATTTCAAAGCTTATGCCGATGCGGTGAATCGCAAGCAGATCAGAACAGGCGAGGTTCAGG TTGTCCCGGTTTCATCACTGAACGGCGTACGGTACATCATCACCTTTCCCACCAGGAACCACTGGCGTTACCCATCGAAA CCGGAATGGATAACAGCCGGGTTGCGCGACTTGCGAAAAAAAATAGAGGACTACCAGATCGAGTCGATAGCGATTCCTCC TCTCGGATTCGGCAATGGCGGGCTGGACTGGAGCGTGGTAAAAGCTGAAATCGAAAGCGCTTTACAAGGTCTTCCCGTCG AGATACAGGTCTATGAGCCATCCTCCGCCATCAGGGATCTGCTGGTAAAAGAGGACAAGCCTGCAGCTGCACACCTCACA CCTGTCAGGGCCATGCTCCTGCTTCTGCTCTATCGTTACCGGGCCATGGGAGAACACGCCAGTGAATTCGCAGCCGAAAA ACTCAGCTATTTCCTGCAGCGGGCTGGAGAAACACAATTGAAACTCGAATTCACCAAAGGGTATTACGGACCGTATTCCG GTAAGGTTCGTCACGTGCTATACGCCCTGAACGGATATTACCTGAAGGGTTTCGAACAGAAAGAAGCGAAACCTTTCGAG CCGTTTGACATCATTGTCGAGCGGAGTGACGAAGTACTTGACTACATCCAGAACAAACTGAATCCGGTCGAGAAAACCCA TCTCGATAAAGTCCTGAAACTGATCAAGGGATTTGAATCGCCTTATGGACTCGAACTGCTTGCTACGGTTGATTATCTCA TTATCGAAACCGGCAACAGTGACCCGCAGGTTCTGTCCGGCGCAATCAGGCAGTGGTCAGCAAGAAAAGCCGATATGTTT CCTCCTGAACATGTGCGCCTTGCGTCAGAACAACTGCATCTGCTGCGAAATCAGTCCCTGCCAACTGCTTCGCATTTCGG TATCGGGGAACGGAATAATCAATTAAAAAATATAACGATAGCCACTATCAGGTGGCCTGTTCCCGAAATCTGTTTCGGGA ACATCAGTAAGCCACGAACCGCCATAATCTGCCGAAACCGTTTTTTTGTAACGTCACATCAGAAATACCAATAG
Upstream 100 bases:
>100_bases TAAATTCGTCTGTAATACTCTCAAAAGCCATGAGCTTCGGCGTGCTTTTATGTCATGGAAATGTTCCGGAATGACATTGT CCTGAACAGACAATCACGGG
Downstream 100 bases:
>100_bases CGCGGCGAATTCAAAGTTTTCCGCAACGCACAAACCGGATTTCAAGCAGCTTGTCGATGCAATCCGGCAAACCAATGCAG AGCTGGCTGCTCATGCAGGT
Product: appr-1-p processing domain-containing protein
Products: NA
Alternate protein names: Appr-1-P Processing Domain Protein; Appr-1-P Processing Family Protein; Appr-1-P Processing Protein; Appr-1-P Processing; Appr-1-P Processing Family
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKKHGQTVFLITINPVGVMGKGIALQFKHAFPENFKAYADAVNRKQIRTGEVQVVPVSSLNGVRYIITFPTRNHWRYPSK PEWITAGLRDLRKKIEDYQIESIAIPPLGFGNGGLDWSVVKAEIESALQGLPVEIQVYEPSSAIRDLLVKEDKPAAAHLT PVRAMLLLLLYRYRAMGEHASEFAAEKLSYFLQRAGETQLKLEFTKGYYGPYSGKVRHVLYALNGYYLKGFEQKEAKPFE PFDIIVERSDEVLDYIQNKLNPVEKTHLDKVLKLIKGFESPYGLELLATVDYLIIETGNSDPQVLSGAIRQWSARKADMF PPEHVRLASEQLHLLRNQSLPTASHFGIGERNNQLKNITIATIRWPVPEICFGNISKPRTAIICRNRFFVTSHQKYQ
Sequences:
>Translated_397_residues MKKHGQTVFLITINPVGVMGKGIALQFKHAFPENFKAYADAVNRKQIRTGEVQVVPVSSLNGVRYIITFPTRNHWRYPSK PEWITAGLRDLRKKIEDYQIESIAIPPLGFGNGGLDWSVVKAEIESALQGLPVEIQVYEPSSAIRDLLVKEDKPAAAHLT PVRAMLLLLLYRYRAMGEHASEFAAEKLSYFLQRAGETQLKLEFTKGYYGPYSGKVRHVLYALNGYYLKGFEQKEAKPFE PFDIIVERSDEVLDYIQNKLNPVEKTHLDKVLKLIKGFESPYGLELLATVDYLIIETGNSDPQVLSGAIRQWSARKADMF PPEHVRLASEQLHLLRNQSLPTASHFGIGERNNQLKNITIATIRWPVPEICFGNISKPRTAIICRNRFFVTSHQKYQ >Mature_397_residues MKKHGQTVFLITINPVGVMGKGIALQFKHAFPENFKAYADAVNRKQIRTGEVQVVPVSSLNGVRYIITFPTRNHWRYPSK PEWITAGLRDLRKKIEDYQIESIAIPPLGFGNGGLDWSVVKAEIESALQGLPVEIQVYEPSSAIRDLLVKEDKPAAAHLT PVRAMLLLLLYRYRAMGEHASEFAAEKLSYFLQRAGETQLKLEFTKGYYGPYSGKVRHVLYALNGYYLKGFEQKEAKPFE PFDIIVERSDEVLDYIQNKLNPVEKTHLDKVLKLIKGFESPYGLELLATVDYLIIETGNSDPQVLSGAIRQWSARKADMF PPEHVRLASEQLHLLRNQSLPTASHFGIGERNNQLKNITIATIRWPVPEICFGNISKPRTAIICRNRFFVTSHQKYQ
Specific function: Unknown
COG id: COG2110
COG function: function code R; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45140; Mature: 45140
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHGQTVFLITINPVGVMGKGIALQFKHAFPENFKAYADAVNRKQIRTGEVQVVPVSSL CCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEECCCEEEEEECCC NGVRYIITFPTRNHWRYPSKPEWITAGLRDLRKKIEDYQIESIAIPPLGFGNGGLDWSVV CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHH KAEIESALQGLPVEIQVYEPSSAIRDLLVKEDKPAAAHLTPVRAMLLLLLYRYRAMGEHA HHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SEFAAEKLSYFLQRAGETQLKLEFTKGYYGPYSGKVRHVLYALNGYYLKGFEQKEAKPFE HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHEEEEECCCEEEECCCCCCCCCCC PFDIIVERSDEVLDYIQNKLNPVEKTHLDKVLKLIKGFESPYGLELLATVDYLIIETGNS CHHEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEHEEEEEEEEEECCCC DPQVLSGAIRQWSARKADMFPPEHVRLASEQLHLLRNQSLPTASHFGIGERNNQLKNITI CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEE ATIRWPVPEICFGNISKPRTAIICRNRFFVTSHQKYQ EEEECCCHHHHCCCCCCCCEEEEEECEEEEECCCCCC >Mature Secondary Structure MKKHGQTVFLITINPVGVMGKGIALQFKHAFPENFKAYADAVNRKQIRTGEVQVVPVSSL CCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEECCCEEEEEECCC NGVRYIITFPTRNHWRYPSKPEWITAGLRDLRKKIEDYQIESIAIPPLGFGNGGLDWSVV CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHH KAEIESALQGLPVEIQVYEPSSAIRDLLVKEDKPAAAHLTPVRAMLLLLLYRYRAMGEHA HHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SEFAAEKLSYFLQRAGETQLKLEFTKGYYGPYSGKVRHVLYALNGYYLKGFEQKEAKPFE HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHEEEEECCCEEEECCCCCCCCCCC PFDIIVERSDEVLDYIQNKLNPVEKTHLDKVLKLIKGFESPYGLELLATVDYLIIETGNS CHHEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEHEEEEEEEEEECCCC DPQVLSGAIRQWSARKADMFPPEHVRLASEQLHLLRNQSLPTASHFGIGERNNQLKNITI CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEE ATIRWPVPEICFGNISKPRTAIICRNRFFVTSHQKYQ EEEECCCHHHHCCCCCCCCEEEEEECEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA