| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357508
Identifier: 119357508
GI number: 119357508
Start: 1937703
End: 1938947
Strand: Reverse
Name: 119357508
Synonym: Cpha266_1710
Alternate gene names: NA
Gene position: 1938947-1937703 (Counterclockwise)
Preceding gene: 119357509
Following gene: 119357507
Centisome position: 61.87
GC content: 49.0
Gene sequence:
>1245_bases ATGAAAGTCGAAAATTTGCAATGCGCTGAGGCGCGACTTGGTCAGAACAATTGCTTGCAACTTGAGGAGGATGCGGGATG TGGGATGATGTATGAACTTCGCACAATCCATATTGGTGACTTGGGTCGTGTCTTGACTGGAAAGACGCCCCCAAGTGTCC GGCCTGAACTATTTGGAGATGATCACCCGTTTCTTACACCAACAGACATTGACGGTGCTTCGCGTTACATTGAGCCCGAA CGTTTTCTTTCGCCAGAAGGGCGCAACTACCAGCAAAGACTTATGCTACCTGGGCGATCCGTTTGCGTTGTCTGTATTGG TGCTACCATTGGCAAAGTTTGCATGACTGGCAGACCGTCTTTCACAAATCAACAAATTAATTCCGTTGTCGTGAATGAGC AAGAGCACGATCCGTTCTTTGTTTATCACCTGATGACAACGCTTCGCGACGAGTTAAAAGCTAATGCTGGTGGGTCGGCG ACTCCCATTATCAATAAGACGGCGTTTTCAGAAATCAAAGTACGTGTTCCCCCGCTTCCAGTTCAACGGCGGATTGCGGG CATACTGTCAACCTACGACGAACTGATTGAGAACAGTCAGCGGCGCATCAAGATTCTGGAGGAGATGGCCCGATCAGTCT ATCGTGAATGGTTCGTTCACTTCCGCTTTCCCGGCCACGAAAATGTTTCGCTCGTTTCGTCTTCTCTTGGTGCTATTCCG CAGGGGTGGGAGGCTGGTCGTTTAGACGATGTGCTTGTTCTTCAACGTGGCTTCGATTTGCCTAAAGCCAAGCGGATGGA GGGTACTGTGCCCATTTACGCAGCTACCGGAGTTACTGGATTTCACTGCGAAGCTAAGGTCAAAGCACCTTGTGTTGTGA CCGGAAGATCAGGCACAATTGGAGATGTCATCTATGTACAGGAAGATTTTTGGCCACTGAATACCTCACTTTGGGCGAAG GGTTTTCCAAAGTCGGAACCGCTTTATGCATACTACGTGCTCTCTTCAGTTGGCTTGAAGCAGTTCAATTCCGGGGCGGC TGTTCCGACGCTTAATCGAAATGACCTTCATGGTCTTGACGTGCTGATTCCTCCATGCGTATTGCAAAAACGATTTCAAA AAATTGCCGGTGCAATGTTATTACAAACCCGCAATCTTGAACTGCAAATTCAAAACCTTCGTCGGACGCGCGATCTACTG TTGCCGCGTCTGCTATCGGGGCAGGTCAATCCCAAGGAGAATTGA
Upstream 100 bases:
>100_bases CCGAAGATGTAAAAAAGGTCGAGCGTCGTCTGGCCTCCGAGGAAAAGAAGTCGTTGAAGAATCCTGACGGCTTGAGTGAG CCAGCGGAGGAGTGATGGGA
Downstream 100 bases:
>100_bases ACGATGAATGCGAAGTCAGATTTGTCACCGATAAAGCAGATACCAATCATTGAAGTGGCGAAAAGACTTGGTATTGAAGT ACGCGGTACGAAAGCGATGT
Product: restriction modification system DNA specificity subunit
Products: NA
Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKVENLQCAEARLGQNNCLQLEEDAGCGMMYELRTIHIGDLGRVLTGKTPPSVRPELFGDDHPFLTPTDIDGASRYIEPE RFLSPEGRNYQQRLMLPGRSVCVVCIGATIGKVCMTGRPSFTNQQINSVVVNEQEHDPFFVYHLMTTLRDELKANAGGSA TPIINKTAFSEIKVRVPPLPVQRRIAGILSTYDELIENSQRRIKILEEMARSVYREWFVHFRFPGHENVSLVSSSLGAIP QGWEAGRLDDVLVLQRGFDLPKAKRMEGTVPIYAATGVTGFHCEAKVKAPCVVTGRSGTIGDVIYVQEDFWPLNTSLWAK GFPKSEPLYAYYVLSSVGLKQFNSGAAVPTLNRNDLHGLDVLIPPCVLQKRFQKIAGAMLLQTRNLELQIQNLRRTRDLL LPRLLSGQVNPKEN
Sequences:
>Translated_414_residues MKVENLQCAEARLGQNNCLQLEEDAGCGMMYELRTIHIGDLGRVLTGKTPPSVRPELFGDDHPFLTPTDIDGASRYIEPE RFLSPEGRNYQQRLMLPGRSVCVVCIGATIGKVCMTGRPSFTNQQINSVVVNEQEHDPFFVYHLMTTLRDELKANAGGSA TPIINKTAFSEIKVRVPPLPVQRRIAGILSTYDELIENSQRRIKILEEMARSVYREWFVHFRFPGHENVSLVSSSLGAIP QGWEAGRLDDVLVLQRGFDLPKAKRMEGTVPIYAATGVTGFHCEAKVKAPCVVTGRSGTIGDVIYVQEDFWPLNTSLWAK GFPKSEPLYAYYVLSSVGLKQFNSGAAVPTLNRNDLHGLDVLIPPCVLQKRFQKIAGAMLLQTRNLELQIQNLRRTRDLL LPRLLSGQVNPKEN >Mature_414_residues MKVENLQCAEARLGQNNCLQLEEDAGCGMMYELRTIHIGDLGRVLTGKTPPSVRPELFGDDHPFLTPTDIDGASRYIEPE RFLSPEGRNYQQRLMLPGRSVCVVCIGATIGKVCMTGRPSFTNQQINSVVVNEQEHDPFFVYHLMTTLRDELKANAGGSA TPIINKTAFSEIKVRVPPLPVQRRIAGILSTYDELIENSQRRIKILEEMARSVYREWFVHFRFPGHENVSLVSSSLGAIP QGWEAGRLDDVLVLQRGFDLPKAKRMEGTVPIYAATGVTGFHCEAKVKAPCVVTGRSGTIGDVIYVQEDFWPLNTSLWAK GFPKSEPLYAYYVLSSVGLKQFNSGAAVPTLNRNDLHGLDVLIPPCVLQKRFQKIAGAMLLQTRNLELQIQNLRRTRDLL LPRLLSGQVNPKEN
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 46232; Mature: 46232
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVENLQCAEARLGQNNCLQLEEDAGCGMMYELRTIHIGDLGRVLTGKTPPSVRPELFGD CCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCC DHPFLTPTDIDGASRYIEPERFLSPEGRNYQQRLMLPGRSVCVVCIGATIGKVCMTGRPS CCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCC FTNQQINSVVVNEQEHDPFFVYHLMTTLRDELKANAGGSATPIINKTAFSEIKVRVPPLP CCCHHHHEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCC VQRRIAGILSTYDELIENSQRRIKILEEMARSVYREWFVHFRFPGHENVSLVSSSLGAIP HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCC QGWEAGRLDDVLVLQRGFDLPKAKRMEGTVPIYAATGVTGFHCEAKVKAPCVVTGRSGTI CCCCCCCCCHHHEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCC GDVIYVQEDFWPLNTSLWAKGFPKSEPLYAYYVLSSVGLKQFNSGAAVPTLNRNDLHGLD CEEEEEECCCEECCHHHHCCCCCCCCCEEEEEEHHHHCHHHCCCCCCCCCCCCCCCCCCC VLIPPCVLQKRFQKIAGAMLLQTRNLELQIQNLRRTRDLLLPRLLSGQVNPKEN EECCHHHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKVENLQCAEARLGQNNCLQLEEDAGCGMMYELRTIHIGDLGRVLTGKTPPSVRPELFGD CCCCCCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCCCC DHPFLTPTDIDGASRYIEPERFLSPEGRNYQQRLMLPGRSVCVVCIGATIGKVCMTGRPS CCCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCC FTNQQINSVVVNEQEHDPFFVYHLMTTLRDELKANAGGSATPIINKTAFSEIKVRVPPLP CCCHHHHEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCC VQRRIAGILSTYDELIENSQRRIKILEEMARSVYREWFVHFRFPGHENVSLVSSSLGAIP HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCC QGWEAGRLDDVLVLQRGFDLPKAKRMEGTVPIYAATGVTGFHCEAKVKAPCVVTGRSGTI CCCCCCCCCHHHEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCC GDVIYVQEDFWPLNTSLWAKGFPKSEPLYAYYVLSSVGLKQFNSGAAVPTLNRNDLHGLD CEEEEEECCCEECCHHHHCCCCCCCCCEEEEEEHHHHCHHHCCCCCCCCCCCCCCCCCCC VLIPPCVLQKRFQKIAGAMLLQTRNLELQIQNLRRTRDLLLPRLLSGQVNPKEN EECCHHHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]