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The map label for this gene is dnaG [H]

Identifier: 119357507

GI number: 119357507

Start: 1936647

End: 1937699

Strand: Reverse

Name: dnaG [H]

Synonym: Cpha266_1709

Alternate gene names: 119357507

Gene position: 1937699-1936647 (Counterclockwise)

Preceding gene: 119357508

Following gene: 119357506

Centisome position: 61.83

GC content: 45.39

Gene sequence:

>1053_bases
ATGAATGCGAAGTCAGATTTGTCACCGATAAAGCAGATACCAATCATTGAAGTGGCGAAAAGACTTGGTATTGAAGTACG
CGGTACGAAAGCGATGTGCTTCATGGGTCATGACAAGGCTTCTCCAAGCTTATCGTTCTCAATAAACTACAATACTTGGC
GATGTTTTGGAGCTTGTGGAAAGCATGGTGATGCCATCAACTTGGTCATGGAGAAGGAGGGGCTGGATTTTAACGCCGCC
CTAGAATGGTTCTCGAATAATTTTAACGCAGATGTTAAACGGCAGTTTAGTGGGCAGAGAAAGCGGACTTGTTCAATCAA
ACAAAATAACGCTATGGTTGCTCCAGTTCAAAAACAGTCCGAATTTTTTTCAGATTCAGAGCTTTACACTTGGTTTGTCA
ATAAATGTGCTTTTGTTTCAAACCCCGTAGGAGTAAACTACTTGGAATCGCATGGAATTTCTGATGTAGCGGCAAGTCGC
TTTAACCTTCGGCAGATGAGCAGTCCTGCGCGTGCCTTTCGTATGCTTTTACAGCAGTGGGGAGAGGATCGGGTTTTTCG
TAGTGGGATCGCATGGGGACGTGATGGTAAACCCATAAGCTTGATTTGGGGCTCATATGCTCTTTTGTTCCCTTTTTACG
ATGAGGTGAAAATCACTTATATCCAAGCCAGAATGTTTGAAAAAGAGCCTAAGGCGAAGTTTCTCAATTTGCGTGGTATC
ACCAAGCCATTGTTCAATGCCGACCGGCTTAAAAGCCTTCCGGCTGGGCAGACGGTGCATCTTTGCGAAGGCGTGCCCGA
TGTAGTGTCTCTGGAATCCAAGGGTTTGATTGCTCTCGGCGTTTTGGGTGCAACTTCGTTTCGTACAGAGTGGGTTGACA
GATTTCTGAAATTCAAGGTTGTTGTTCTCGGTGATGGTGATGAGGGTGGGGCTAAGTTTGCGAAGGACATTTCCAAGTAC
TTCATTGATCGTGGTAAACCGGTTCAATGTATGACACTTCCAAAAGGCAAAGATGTTTCGGATGTGCTGGCACAAGATGG
GAGCGCCAAATGA

Upstream 100 bases:

>100_bases
CCGCAATCTTGAACTGCAAATTCAAAACCTTCGTCGGACGCGCGATCTACTGTTGCCGCGTCTGCTATCGGGGCAGGTCA
ATCCCAAGGAGAATTGAACG

Downstream 100 bases:

>100_bases
GCTTTTTAAAAGAAGTCACTGGTCAATTGAACCTGCGTTGGGCATGGGAAAAGGTTAGACGAGCTTCAACACCTGGTGAT
GCATGGATTAATGAAATCGA

Product: zinc finger, CHC2-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNAKSDLSPIKQIPIIEVAKRLGIEVRGTKAMCFMGHDKASPSLSFSINYNTWRCFGACGKHGDAINLVMEKEGLDFNAA
LEWFSNNFNADVKRQFSGQRKRTCSIKQNNAMVAPVQKQSEFFSDSELYTWFVNKCAFVSNPVGVNYLESHGISDVAASR
FNLRQMSSPARAFRMLLQQWGEDRVFRSGIAWGRDGKPISLIWGSYALLFPFYDEVKITYIQARMFEKEPKAKFLNLRGI
TKPLFNADRLKSLPAGQTVHLCEGVPDVVSLESKGLIALGVLGATSFRTEWVDRFLKFKVVVLGDGDEGGAKFAKDISKY
FIDRGKPVQCMTLPKGKDVSDVLAQDGSAK

Sequences:

>Translated_350_residues
MNAKSDLSPIKQIPIIEVAKRLGIEVRGTKAMCFMGHDKASPSLSFSINYNTWRCFGACGKHGDAINLVMEKEGLDFNAA
LEWFSNNFNADVKRQFSGQRKRTCSIKQNNAMVAPVQKQSEFFSDSELYTWFVNKCAFVSNPVGVNYLESHGISDVAASR
FNLRQMSSPARAFRMLLQQWGEDRVFRSGIAWGRDGKPISLIWGSYALLFPFYDEVKITYIQARMFEKEPKAKFLNLRGI
TKPLFNADRLKSLPAGQTVHLCEGVPDVVSLESKGLIALGVLGATSFRTEWVDRFLKFKVVVLGDGDEGGAKFAKDISKY
FIDRGKPVQCMTLPKGKDVSDVLAQDGSAK
>Mature_350_residues
MNAKSDLSPIKQIPIIEVAKRLGIEVRGTKAMCFMGHDKASPSLSFSINYNTWRCFGACGKHGDAINLVMEKEGLDFNAA
LEWFSNNFNADVKRQFSGQRKRTCSIKQNNAMVAPVQKQSEFFSDSELYTWFVNKCAFVSNPVGVNYLESHGISDVAASR
FNLRQMSSPARAFRMLLQQWGEDRVFRSGIAWGRDGKPISLIWGSYALLFPFYDEVKITYIQARMFEKEPKAKFLNLRGI
TKPLFNADRLKSLPAGQTVHLCEGVPDVVSLESKGLIALGVLGATSFRTEWVDRFLKFKVVVLGDGDEGGAKFAKDISKY
FIDRGKPVQCMTLPKGKDVSDVLAQDGSAK

Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007693
- InterPro:   IPR016136
- InterPro:   IPR013264
- InterPro:   IPR019475
- InterPro:   IPR006295
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF10410 DnaB_bind; PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]

EC number: NA

Molecular weight: Translated: 39071; Mature: 39071

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKSDLSPIKQIPIIEVAKRLGIEVRGTKAMCFMGHDKASPSLSFSINYNTWRCFGACG
CCCCCCCCHHHCCCHHHHHHHCCEEEECCEEEEEECCCCCCCCEEEEEECCCEEEEECCC
KHGDAINLVMEKEGLDFNAALEWFSNNFNADVKRQFSGQRKRTCSIKQNNAMVAPVQKQS
CCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCEEEECHHHH
EFFSDSELYTWFVNKCAFVSNPVGVNYLESHGISDVAASRFNLRQMSSPARAFRMLLQQW
HHCCCCCCEEHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
GEDRVFRSGIAWGRDGKPISLIWGSYALLFPFYDEVKITYIQARMFEKEPKAKFLNLRGI
CCCHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCEEEEEEEEEHHCCCCCHHEEECCCC
TKPLFNADRLKSLPAGQTVHLCEGVPDVVSLESKGLIALGVLGATSFRTEWVDRFLKFKV
CHHHCCHHHHHCCCCCCEEEECCCCCHHEEECCCCEEEEEECCCCHHHHHHHHHHHEEEE
VVLGDGDEGGAKFAKDISKYFIDRGKPVQCMTLPKGKDVSDVLAQDGSAK
EEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MNAKSDLSPIKQIPIIEVAKRLGIEVRGTKAMCFMGHDKASPSLSFSINYNTWRCFGACG
CCCCCCCCHHHCCCHHHHHHHCCEEEECCEEEEEECCCCCCCCEEEEEECCCEEEEECCC
KHGDAINLVMEKEGLDFNAALEWFSNNFNADVKRQFSGQRKRTCSIKQNNAMVAPVQKQS
CCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCEEEECHHHH
EFFSDSELYTWFVNKCAFVSNPVGVNYLESHGISDVAASRFNLRQMSSPARAFRMLLQQW
HHCCCCCCEEHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
GEDRVFRSGIAWGRDGKPISLIWGSYALLFPFYDEVKITYIQARMFEKEPKAKFLNLRGI
CCCHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCEEEEEEEEEHHCCCCCHHEEECCCC
TKPLFNADRLKSLPAGQTVHLCEGVPDVVSLESKGLIALGVLGATSFRTEWVDRFLKFKV
CHHHCCHHHHHCCCCCCEEEECCCCCHHEEECCCCEEEEEECCCCHHHHHHHHHHHEEEE
VVLGDGDEGGAKFAKDISKYFIDRGKPVQCMTLPKGKDVSDVLAQDGSAK
EEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]