| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357462
Identifier: 119357462
GI number: 119357462
Start: 1888759
End: 1889016
Strand: Reverse
Name: 119357462
Synonym: Cpha266_1661
Alternate gene names: NA
Gene position: 1889016-1888759 (Counterclockwise)
Preceding gene: 119357471
Following gene: 119357461
Centisome position: 60.28
GC content: 46.51
Gene sequence:
>258_bases TTGCCGGAAAGCCGGCGTAAAAACCGGAACTGTCCTGCAGGCAGAAGCGCTTTCGGGTGTCATATAAGGAGGTTCGGCAT AGACATCTCGGTCAGGTTTATTCGATCTTTCTGCAATAGCGATAGTGCCGAAGAAGCCGTCAATACCTTTTATCGCTCTC ATGTCCATGATGAAATAAGCCGCGAAAATTTGATGGCGCAGTGTTTTTTTGCGATAAAAACAGCTCGCTGGTCACTCCCG AAGTTAAAAAAATCCTGA
Upstream 100 bases:
>100_bases GGATGCGCTTTCTGGCGTTCAGGGAATTTACCGCATAGCAGGGCTGATTTCAGTGTTGTACCCCCTTTTTTTGTAACGCC TTACAAAGAGGGATGGGGAT
Downstream 100 bases:
>100_bases ATATAATTAACGAACAGACGTAAGGTTTTAACCGCTGGCAATCATTGACGATCCGGCAATGTTTTTGGCGCAGGATCGTT TTTGTTTTCGATAGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MPESRRKNRNCPAGRSAFGCHIRRFGIDISVRFIRSFCNSDSAEEAVNTFYRSHVHDEISRENLMAQCFFAIKTARWSLP KLKKS
Sequences:
>Translated_85_residues MPESRRKNRNCPAGRSAFGCHIRRFGIDISVRFIRSFCNSDSAEEAVNTFYRSHVHDEISRENLMAQCFFAIKTARWSLP KLKKS >Mature_84_residues PESRRKNRNCPAGRSAFGCHIRRFGIDISVRFIRSFCNSDSAEEAVNTFYRSHVHDEISRENLMAQCFFAIKTARWSLPK LKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9881; Mature: 9750
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESRRKNRNCPAGRSAFGCHIRRFGIDISVRFIRSFCNSDSAEEAVNTFYRSHVHDEIS CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RENLMAQCFFAIKTARWSLPKLKKS HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PESRRKNRNCPAGRSAFGCHIRRFGIDISVRFIRSFCNSDSAEEAVNTFYRSHVHDEIS CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RENLMAQCFFAIKTARWSLPKLKKS HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA