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The map label for this gene is 119357244

Identifier: 119357244

GI number: 119357244

Start: 1638794

End: 1640797

Strand: Reverse

Name: 119357244

Synonym: Cpha266_1436

Alternate gene names: NA

Gene position: 1640797-1638794 (Counterclockwise)

Preceding gene: 119357245

Following gene: 119357243

Centisome position: 52.36

GC content: 53.24

Gene sequence:

>2004_bases
ATGGGCAGGATTGACCACTCAGCAGCCGGTGCGATACTTGCCACCGACAAAAACAAGTGGATCGGAAGAATTCTTGGCTA
TCTCATTGCCGGACACCACACCGGGTTGCCGGATTGGCACAAGGAACCCGGAACCAAAGGTGACCCGCTGTCCGAGCGCT
TGAGTAATCCCGAGCATCTGATGAATGCCTTGAAAGGTAACCCTCCCGAAAACATTCTGAATACGGCCTTGCCATCGTCG
TTGCCGTGTAAAAGCCAGGATGGCGGTTCGGAGCTGGTACACCTTTGGATTCGTATGCTTTACTCCTGCCTCGTCGATGC
GGACTTTCTCGATACCGAACGGTTCATGAATCCGGAGAAATCCGAACTTCGTCCGAACGAAGTTGATCTGGTAATGCTGA
GAGAGCGTTTAGACGTGTACATGGCCGCCAAAGAGAATGGAGCTTTGGATACGCCTGTAAACCGGGCGCGAAAAGAGATT
CTTCGGGAGTGCCGCGATAAAGGGCGTTCGCTGGAACCTGGACTTTTTTCGCTGACCGTACCCACCGGCGGCGGCAAAAC
CCTCGCATCGATGGCCTTCGCGCTCGAACACGCCATCAGGCACGGCAAAAAGCGGATCATCGTAGCGATTCCCTACACAA
GCATTATTGAGCAAACTGCGGCGGTTTATCGCGAAGTGTTCGGGGATGACACCGTGCTTGAACATCACAGCAATCTCGAT
CCGGCAAGGGAAACTGCCGAGTCTCGGCTTGCTACCGAAAATTGGGATGCTCCGATCATTGTGACCACCAATGTGCAACT
TTTCGAGTCACTCTTCGCGGCCAGAAGCTCGGCGTGCCGCAAGCTGCATAACATCGTCAATTCAGTTGTCGTGCTCGATG
AGACGCAGATGCTGCCTACCGATTTTCTGCAACCGATCGTTTCCGTAATCAAATCGCTGAGTACGTATTTCAGGGCTTCG
GTCGTGCTCTGCACGGCCACCCAGCCGGTTTTGAGCGGAAAGGTTGGAACAGGTAAAGATATTCTAAACGGTTTTGAGGG
CGGCAGTGTGCGCGAATTGATGTCCGATCCGGAAAAACTGTTCAGCGTTTTCCAACGTGTCCGGGTGCGGATGCTCGGCC
AAGCCGGTGAACGGTATGAGTGGACGGAGATTGCCAGGCAGCTTCAAGAGCACGAGCAGGTTTTATGCATTGTCAACACC
CGCAAGGATTGCCGGGAGCTTCATGCGCAAATGCCTGCAGGGACAGTTCATCTCTCCGCCCTGATGTGCCCGGAGCATCG
CAGCAAGGTGATTTCCGAAGTGAAGTCGAAACTTATGACGGGCGAGCTGGTGAGGGTTGTGAGCACGCAGTTGCTCGAAG
CTGGCGTTGATATCGATTTCCCGACGGTTTACCGCTCGTTCAGCGGCCTCGACAGCATCGCACAGGCAGCGGGGAGGTGC
AATCGTGAAGGAAGACTTGAGTGTGGCGATGTGGTTGTGTTCAACCCACCAAAGCCTTCGCCATCGGGCAGATTGATGAA
AGCTGAAAACGCAGCTCAGGAGCTCTTTCGCACGGATCCGGAACTGGCTTCATCGCTCATGCCGGAAGCGTTCAGTCGCT
ATTTCATCCGCTATTTCAGCGGTCTGAACGGATTTGACACGGAGCAGATCATGGACTTGCTCGCCGGAAACGATGCCCTC
AAGTATCAGATACAGTTTCGTACGGCAGCCAAGCGCTTCAAACTCATCGATGATACGCTGCAACACGGTATTATCGTCAG
ATATAGAGACGGGAAAGCAAATATTGTTGCCTTGATCGATCAACTGCGTTTTGGTGGTTCGAACCGAAAACTGATGCGGC
AACTTCAGCGCTATGCGGTGAATGTATATGATCCTGATCTGAAGCAACTGAGGGGAAATGGCCTGATCGAAGAGGTCAAC
GGTGTCTGGGTGCAAACGGCGGATAGCCTGTATGATCCGGTATTCGGCCTGAATATCGACGCCACGCTAAATTTTGTCTA
CTAA

Upstream 100 bases:

>100_bases
TGGGCAATGGCTGCCGGGCTCCTGCATGATCTGGGAAAGTATAATCCACGCTGGCAGGATTATATCCGGAAGAGCAACGG
CGATTATCTGGAGGATTCAG

Downstream 100 bases:

>100_bases
GCTCAACAAGGAGAAACACTCTATGGAGCATTGGAATAAACAATTCTGTCTCGAAGTCAAGGGTGATTACGCCTGCTTTA
CCCGACCTGAAATGAAGGTC

Product: CRISPR-associated helicase Cas3

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; Helicases; CRISPR-Associated Helicase Cas3 Core; CRISPR-Associated Helicase Cas3 Family; Helicase-Like Protein; Cas3 Family CRISPR-Associated Helicase; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MGRIDHSAAGAILATDKNKWIGRILGYLIAGHHTGLPDWHKEPGTKGDPLSERLSNPEHLMNALKGNPPENILNTALPSS
LPCKSQDGGSELVHLWIRMLYSCLVDADFLDTERFMNPEKSELRPNEVDLVMLRERLDVYMAAKENGALDTPVNRARKEI
LRECRDKGRSLEPGLFSLTVPTGGGKTLASMAFALEHAIRHGKKRIIVAIPYTSIIEQTAAVYREVFGDDTVLEHHSNLD
PARETAESRLATENWDAPIIVTTNVQLFESLFAARSSACRKLHNIVNSVVVLDETQMLPTDFLQPIVSVIKSLSTYFRAS
VVLCTATQPVLSGKVGTGKDILNGFEGGSVRELMSDPEKLFSVFQRVRVRMLGQAGERYEWTEIARQLQEHEQVLCIVNT
RKDCRELHAQMPAGTVHLSALMCPEHRSKVISEVKSKLMTGELVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
NREGRLECGDVVVFNPPKPSPSGRLMKAENAAQELFRTDPELASSLMPEAFSRYFIRYFSGLNGFDTEQIMDLLAGNDAL
KYQIQFRTAAKRFKLIDDTLQHGIIVRYRDGKANIVALIDQLRFGGSNRKLMRQLQRYAVNVYDPDLKQLRGNGLIEEVN
GVWVQTADSLYDPVFGLNIDATLNFVY

Sequences:

>Translated_667_residues
MGRIDHSAAGAILATDKNKWIGRILGYLIAGHHTGLPDWHKEPGTKGDPLSERLSNPEHLMNALKGNPPENILNTALPSS
LPCKSQDGGSELVHLWIRMLYSCLVDADFLDTERFMNPEKSELRPNEVDLVMLRERLDVYMAAKENGALDTPVNRARKEI
LRECRDKGRSLEPGLFSLTVPTGGGKTLASMAFALEHAIRHGKKRIIVAIPYTSIIEQTAAVYREVFGDDTVLEHHSNLD
PARETAESRLATENWDAPIIVTTNVQLFESLFAARSSACRKLHNIVNSVVVLDETQMLPTDFLQPIVSVIKSLSTYFRAS
VVLCTATQPVLSGKVGTGKDILNGFEGGSVRELMSDPEKLFSVFQRVRVRMLGQAGERYEWTEIARQLQEHEQVLCIVNT
RKDCRELHAQMPAGTVHLSALMCPEHRSKVISEVKSKLMTGELVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
NREGRLECGDVVVFNPPKPSPSGRLMKAENAAQELFRTDPELASSLMPEAFSRYFIRYFSGLNGFDTEQIMDLLAGNDAL
KYQIQFRTAAKRFKLIDDTLQHGIIVRYRDGKANIVALIDQLRFGGSNRKLMRQLQRYAVNVYDPDLKQLRGNGLIEEVN
GVWVQTADSLYDPVFGLNIDATLNFVY
>Mature_666_residues
GRIDHSAAGAILATDKNKWIGRILGYLIAGHHTGLPDWHKEPGTKGDPLSERLSNPEHLMNALKGNPPENILNTALPSSL
PCKSQDGGSELVHLWIRMLYSCLVDADFLDTERFMNPEKSELRPNEVDLVMLRERLDVYMAAKENGALDTPVNRARKEIL
RECRDKGRSLEPGLFSLTVPTGGGKTLASMAFALEHAIRHGKKRIIVAIPYTSIIEQTAAVYREVFGDDTVLEHHSNLDP
ARETAESRLATENWDAPIIVTTNVQLFESLFAARSSACRKLHNIVNSVVVLDETQMLPTDFLQPIVSVIKSLSTYFRASV
VLCTATQPVLSGKVGTGKDILNGFEGGSVRELMSDPEKLFSVFQRVRVRMLGQAGERYEWTEIARQLQEHEQVLCIVNTR
KDCRELHAQMPAGTVHLSALMCPEHRSKVISEVKSKLMTGELVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRCN
REGRLECGDVVVFNPPKPSPSGRLMKAENAAQELFRTDPELASSLMPEAFSRYFIRYFSGLNGFDTEQIMDLLAGNDALK
YQIQFRTAAKRFKLIDDTLQHGIIVRYRDGKANIVALIDQLRFGGSNRKLMRQLQRYAVNVYDPDLKQLRGNGLIEEVNG
VWVQTADSLYDPVFGLNIDATLNFVY

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74426; Mature: 74295

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIDHSAAGAILATDKNKWIGRILGYLIAGHHTGLPDWHKEPGTKGDPLSERLSNPEHL
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHH
MNALKGNPPENILNTALPSSLPCKSQDGGSELVHLWIRMLYSCLVDADFLDTERFMNPEK
HHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH
SELRPNEVDLVMLRERLDVYMAAKENGALDTPVNRARKEILRECRDKGRSLEPGLFSLTV
HCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
PTGGGKTLASMAFALEHAIRHGKKRIIVAIPYTSIIEQTAAVYREVFGDDTVLEHHSNLD
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PARETAESRLATENWDAPIIVTTNVQLFESLFAARSSACRKLHNIVNSVVVLDETQMLPT
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCH
DFLQPIVSVIKSLSTYFRASVVLCTATQPVLSGKVGTGKDILNGFEGGSVRELMSDPEKL
HHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCCHHHHCCCCCCCHHHHHCCHHHH
FSVFQRVRVRMLGQAGERYEWTEIARQLQEHEQVLCIVNTRKDCRELHAQMPAGTVHLSA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCEEHHH
LMCPEHRSKVISEVKSKLMTGELVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
NREGRLECGDVVVFNPPKPSPSGRLMKAENAAQELFRTDPELASSLMPEAFSRYFIRYFS
CCCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GLNGFDTEQIMDLLAGNDALKYQIQFRTAAKRFKLIDDTLQHGIIVRYRDGKANIVALID
CCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
QLRFGGSNRKLMRQLQRYAVNVYDPDLKQLRGNGLIEEVNGVWVQTADSLYDPVFGLNID
HHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCCCEEEEHHHHHCCCCCCCCC
ATLNFVY
CEEEEEC
>Mature Secondary Structure 
GRIDHSAAGAILATDKNKWIGRILGYLIAGHHTGLPDWHKEPGTKGDPLSERLSNPEHL
CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCHHHH
MNALKGNPPENILNTALPSSLPCKSQDGGSELVHLWIRMLYSCLVDADFLDTERFMNPEK
HHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH
SELRPNEVDLVMLRERLDVYMAAKENGALDTPVNRARKEILRECRDKGRSLEPGLFSLTV
HCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEE
PTGGGKTLASMAFALEHAIRHGKKRIIVAIPYTSIIEQTAAVYREVFGDDTVLEHHSNLD
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PARETAESRLATENWDAPIIVTTNVQLFESLFAARSSACRKLHNIVNSVVVLDETQMLPT
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCH
DFLQPIVSVIKSLSTYFRASVVLCTATQPVLSGKVGTGKDILNGFEGGSVRELMSDPEKL
HHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCCHHHHCCCCCCCHHHHHCCHHHH
FSVFQRVRVRMLGQAGERYEWTEIARQLQEHEQVLCIVNTRKDCRELHAQMPAGTVHLSA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCEEHHH
LMCPEHRSKVISEVKSKLMTGELVRVVSTQLLEAGVDIDFPTVYRSFSGLDSIAQAAGRC
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
NREGRLECGDVVVFNPPKPSPSGRLMKAENAAQELFRTDPELASSLMPEAFSRYFIRYFS
CCCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GLNGFDTEQIMDLLAGNDALKYQIQFRTAAKRFKLIDDTLQHGIIVRYRDGKANIVALID
CCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHH
QLRFGGSNRKLMRQLQRYAVNVYDPDLKQLRGNGLIEEVNGVWVQTADSLYDPVFGLNID
HHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHCCCCEEEEHHHHHCCCCCCCCC
ATLNFVY
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA