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The map label for this gene is 119357243

Identifier: 119357243

GI number: 119357243

Start: 1638058

End: 1638771

Strand: Reverse

Name: 119357243

Synonym: Cpha266_1435

Alternate gene names: NA

Gene position: 1638771-1638058 (Counterclockwise)

Preceding gene: 119357244

Following gene: 119357242

Centisome position: 52.29

GC content: 54.34

Gene sequence:

>714_bases
ATGGAGCATTGGAATAAACAATTCTGTCTCGAAGTCAAGGGTGATTACGCCTGCTTTACCCGACCTGAAATGAAGGTCGA
GCGGGTCAGCTACGACGTCATCACCCCTTCGGCGACACGGGGAATTTTCGAGGCGATTTTCTGGAAACCGGCGATTCGCT
GGCGGATTCGCAAGATCGAGGTGCTGAACCCGATCAAGTGGATTTCGGTTCGGCGCAACGAGGTCGGCCAGACCGCAAGC
GAGCGGAGCGACTGCATTTTTATCGAAGTGGCGCGTCAACAACGAGCGGGCTTGTTTCTGCGGGATGTGGCCTACCGGCT
GCACGCTGAACTCGAATTCATTTCGCCTTCAGAACGTCCAGATGCGAAACACCCGGTACCGGAAGCATTGCTGGACGGCT
GGGAAACTGAGGAGCTGCGCAAGGATGAAAATCCGGGCAAATACTACGGCATTTTCGAGCGCCGGGCGCGGAAAGGGCAG
TGCTTCAATCAGCCATACCTCGGTTGCCGCGAGTTCAGTTGCGAGTTCAGGCTGGTCGATGATTTGTCAAACGAACCCGC
ACCGATCAGCGAAACGCGCAATCTGGGGTACATGCTTTACGACCTCGATTTTCAAAAGAACGTGAAGGAGCCTCCGCCAG
CATTTTTCAGGGTCAGTATGGAAAACGGGGTAATCAATGTTCCGGCATGGGATAGTGAGGAGGTGAGAAAATGA

Upstream 100 bases:

>100_bases
TGGGTGCAAACGGCGGATAGCCTGTATGATCCGGTATTCGGCCTGAATATCGACGCCACGCTAAATTTTGTCTACTAAGC
TCAACAAGGAGAAACACTCT

Downstream 100 bases:

>100_bases
TTCTGCATGCACTGTACGACTATTATCAGCGAAAAGCTGCCGATCCGGAAAGCGGTATTGCTCCGGAGGGGTTTGAATGG
AAGGAAATTCCGTTTGTGAT

Product: CRISPR-associated Cas5 family protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Csd1 Family Protein; CRISPR-Associated Dvulg Subtype; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Cas5d Family Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MEHWNKQFCLEVKGDYACFTRPEMKVERVSYDVITPSATRGIFEAIFWKPAIRWRIRKIEVLNPIKWISVRRNEVGQTAS
ERSDCIFIEVARQQRAGLFLRDVAYRLHAELEFISPSERPDAKHPVPEALLDGWETEELRKDENPGKYYGIFERRARKGQ
CFNQPYLGCREFSCEFRLVDDLSNEPAPISETRNLGYMLYDLDFQKNVKEPPPAFFRVSMENGVINVPAWDSEEVRK

Sequences:

>Translated_237_residues
MEHWNKQFCLEVKGDYACFTRPEMKVERVSYDVITPSATRGIFEAIFWKPAIRWRIRKIEVLNPIKWISVRRNEVGQTAS
ERSDCIFIEVARQQRAGLFLRDVAYRLHAELEFISPSERPDAKHPVPEALLDGWETEELRKDENPGKYYGIFERRARKGQ
CFNQPYLGCREFSCEFRLVDDLSNEPAPISETRNLGYMLYDLDFQKNVKEPPPAFFRVSMENGVINVPAWDSEEVRK
>Mature_237_residues
MEHWNKQFCLEVKGDYACFTRPEMKVERVSYDVITPSATRGIFEAIFWKPAIRWRIRKIEVLNPIKWISVRRNEVGQTAS
ERSDCIFIEVARQQRAGLFLRDVAYRLHAELEFISPSERPDAKHPVPEALLDGWETEELRKDENPGKYYGIFERRARKGQ
CFNQPYLGCREFSCEFRLVDDLSNEPAPISETRNLGYMLYDLDFQKNVKEPPPAFFRVSMENGVINVPAWDSEEVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27858; Mature: 27858

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHWNKQFCLEVKGDYACFTRPEMKVERVSYDVITPSATRGIFEAIFWKPAIRWRIRKIE
CCCCCCEEEEEECCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHCCCHHEEEEEEE
VLNPIKWISVRRNEVGQTASERSDCIFIEVARQQRAGLFLRDVAYRLHAELEFISPSERP
ECCCEEEEEEHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHEEEEECCCCCC
DAKHPVPEALLDGWETEELRKDENPGKYYGIFERRARKGQCFNQPYLGCREFSCEFRLVD
CCCCCCCHHHHCCCCCHHHHCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC
DLSNEPAPISETRNLGYMLYDLDFQKNVKEPPPAFFRVSMENGVINVPAWDSEEVRK
CCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCEEEEEECCCEEECCCCCHHHHCC
>Mature Secondary Structure
MEHWNKQFCLEVKGDYACFTRPEMKVERVSYDVITPSATRGIFEAIFWKPAIRWRIRKIE
CCCCCCEEEEEECCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHCCCHHEEEEEEE
VLNPIKWISVRRNEVGQTASERSDCIFIEVARQQRAGLFLRDVAYRLHAELEFISPSERP
ECCCEEEEEEHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHEEEEECCCCCC
DAKHPVPEALLDGWETEELRKDENPGKYYGIFERRARKGQCFNQPYLGCREFSCEFRLVD
CCCCCCCHHHHCCCCCHHHHCCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEC
DLSNEPAPISETRNLGYMLYDLDFQKNVKEPPPAFFRVSMENGVINVPAWDSEEVRK
CCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCEEEEEECCCEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA