| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357233
Identifier: 119357233
GI number: 119357233
Start: 1619047
End: 1620012
Strand: Reverse
Name: 119357233
Synonym: Cpha266_1425
Alternate gene names: NA
Gene position: 1620012-1619047 (Counterclockwise)
Preceding gene: 119357235
Following gene: 119357231
Centisome position: 51.69
GC content: 52.17
Gene sequence:
>966_bases ATGCCACGAGGAGCGAGACTTGATGTAGCGGGAACTCTGCATCACGTGATTATCAGGGGAATCGAACAAGGGAGTATCGT GCGAGACGATACAGACAGGAAAATGTTTCTCGATCGGATGGGGTTGCTTGCCGCAAGCTCCGGCACGAGCATCTACGCTT TTGCCCTGATGACGAACCATGCGCATATCCTGCTGAAAAGCGGCCCGAATGGGTTGTCCGGTTACATGCGTCGTCTGCTT TCATGGTATGCGCAGTATTTTAATCGCCGTCACCAGCGGGTCGGACATCTTTTTCAGAACAGGTACAAATCGATCATCTG CGAAGAGGAGGCATATTTCGATAAACTGGTGGCATACATCCATCTGAATCCTTTACGTGCCGGACTTGCAGAAACGATGC AGCAACTGGCGTCATACCCCTGGAGCGGACATGCGGTTCTGATGAACAAGGTTCGTTATGAGTGGATGGATCGGGACTAT GTGTTGCGATTTTTCGGAAGCAGGGAGGGATTGGCAAGGAACGCGTATCTGAGATTTCTCGAAGAGGAGCTGTGCATCGA CCGTGAAAAGGAGCTGTCGGGGGGTGGCCTTGTAAGATCGCAGGGCGGATGGTCGAAAGTACAGTCGATGCGGAAAAGAG GAGAGAAAGCGCTTGGTGATGAACGGATTCTCGGAGGCGATGACTTTGTCAGGAGGGTGCTGAAAGAGGGGGAAGAGGAC AAGGATGCCCTGTTGCCGGAAAACGAGCGAATGAAACGGTTCAAAGAGGCTGTCGAGCAGGTATGCGAGGATGCCGGGAT AACCAAAACGTATTTTCTGTCGGGGAGCAGGGGAGGGAAGTTGCCCTTGTTGAGAAAAGAGCTTGCGATGAAGTCTGTGT ATGAGTATGGCATATCGCTTGCCGAAACGGCAAGGCAGCTCGGAGTAACCACGAATGCCGTGAGTTATATGCTGAAGTCC CGGTAA
Upstream 100 bases:
>100_bases CAAAGCGCTTGGGGACGTTGATCAGTAAACTAAAAGAGATGAATTTTATATATATTGGAAAAAGAAAATATCGATACTGA ACTGCCAATACCCAACGCTT
Downstream 100 bases:
>100_bases GGCATGCGGCAATCCGGAGCTGACTGCCACGTGCAGAGGCGATTATCTGCCGGTACGGTTCGGTGTTTGTTTTGTTGTTG CTACAGCCTGAATTCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MPRGARLDVAGTLHHVIIRGIEQGSIVRDDTDRKMFLDRMGLLAASSGTSIYAFALMTNHAHILLKSGPNGLSGYMRRLL SWYAQYFNRRHQRVGHLFQNRYKSIICEEEAYFDKLVAYIHLNPLRAGLAETMQQLASYPWSGHAVLMNKVRYEWMDRDY VLRFFGSREGLARNAYLRFLEEELCIDREKELSGGGLVRSQGGWSKVQSMRKRGEKALGDERILGGDDFVRRVLKEGEED KDALLPENERMKRFKEAVEQVCEDAGITKTYFLSGSRGGKLPLLRKELAMKSVYEYGISLAETARQLGVTTNAVSYMLKS R
Sequences:
>Translated_321_residues MPRGARLDVAGTLHHVIIRGIEQGSIVRDDTDRKMFLDRMGLLAASSGTSIYAFALMTNHAHILLKSGPNGLSGYMRRLL SWYAQYFNRRHQRVGHLFQNRYKSIICEEEAYFDKLVAYIHLNPLRAGLAETMQQLASYPWSGHAVLMNKVRYEWMDRDY VLRFFGSREGLARNAYLRFLEEELCIDREKELSGGGLVRSQGGWSKVQSMRKRGEKALGDERILGGDDFVRRVLKEGEED KDALLPENERMKRFKEAVEQVCEDAGITKTYFLSGSRGGKLPLLRKELAMKSVYEYGISLAETARQLGVTTNAVSYMLKS R >Mature_320_residues PRGARLDVAGTLHHVIIRGIEQGSIVRDDTDRKMFLDRMGLLAASSGTSIYAFALMTNHAHILLKSGPNGLSGYMRRLLS WYAQYFNRRHQRVGHLFQNRYKSIICEEEAYFDKLVAYIHLNPLRAGLAETMQQLASYPWSGHAVLMNKVRYEWMDRDYV LRFFGSREGLARNAYLRFLEEELCIDREKELSGGGLVRSQGGWSKVQSMRKRGEKALGDERILGGDDFVRRVLKEGEEDK DALLPENERMKRFKEAVEQVCEDAGITKTYFLSGSRGGKLPLLRKELAMKSVYEYGISLAETARQLGVTTNAVSYMLKSR
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36675; Mature: 36544
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGARLDVAGTLHHVIIRGIEQGSIVRDDTDRKMFLDRMGLLAASSGTSIYAFALMTNH CCCCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHEECCCCCEEEEEEECCC AHILLKSGPNGLSGYMRRLLSWYAQYFNRRHQRVGHLFQNRYKSIICEEEAYFDKLVAYI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLNPLRAGLAETMQQLASYPWSGHAVLMNKVRYEWMDRDYVLRFFGSREGLARNAYLRFL HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH EEELCIDREKELSGGGLVRSQGGWSKVQSMRKRGEKALGDERILGGDDFVRRVLKEGEED HHHHCCCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCC KDALLPENERMKRFKEAVEQVCEDAGITKTYFLSGSRGGKLPLLRKELAMKSVYEYGISL CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHH AETARQLGVTTNAVSYMLKSR HHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure PRGARLDVAGTLHHVIIRGIEQGSIVRDDTDRKMFLDRMGLLAASSGTSIYAFALMTNH CCCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHEECCCCCEEEEEEECCC AHILLKSGPNGLSGYMRRLLSWYAQYFNRRHQRVGHLFQNRYKSIICEEEAYFDKLVAYI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH HLNPLRAGLAETMQQLASYPWSGHAVLMNKVRYEWMDRDYVLRFFGSREGLARNAYLRFL HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH EEELCIDREKELSGGGLVRSQGGWSKVQSMRKRGEKALGDERILGGDDFVRRVLKEGEED HHHHCCCCHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCC KDALLPENERMKRFKEAVEQVCEDAGITKTYFLSGSRGGKLPLLRKELAMKSVYEYGISL CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHH AETARQLGVTTNAVSYMLKSR HHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA