| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357231
Identifier: 119357231
GI number: 119357231
Start: 1615991
End: 1616458
Strand: Reverse
Name: 119357231
Synonym: Cpha266_1423
Alternate gene names: NA
Gene position: 1616458-1615991 (Counterclockwise)
Preceding gene: 119357233
Following gene: 119357230
Centisome position: 51.58
GC content: 45.73
Gene sequence:
>468_bases ATGGCCAAGCAGAGTTTGCTGCAGGAGATGAAGAAGACGTTTATGCTTCATGCAATTGCGGCTCATTTCAGCAATGGAAT GATTCCTGTAGCTGTTCTTTATCTTTTATTGACTATTTCGACTGGAGATGTGTTTTTTGAGCGTACGGTCGAACATCTTA TCATTATTGTTCTTATGGCTATTCCGGTCTCTTTTTTCTCCGGCATTTATGACTGGAAAAAAAAATATCGGGGGGCCAAG GCTCCGGTGTTCATGAAAAAAATCCGGCTTTCCGGTATTCTGTTTGTTCTCTGCGCTCTGACTGTCGGTATCCGGCTTTC GACTCCTGATGTGATGACTGGTACCGGAATTCTGCACTGGGTCTATATCGTTCTGTTGCTCGGTATGTTGCCGATAGTGA CGTTGCTTGGCCATTATGGAGGAAAGCTTGCCTCTCAGGGTCGCCAGCAGCAACCAAAGGCTTCATGA
Upstream 100 bases:
>100_bases GGGTATGTTGTTATTTGGGAACAGGTAATCGTGTGTATCTTTTTGTGGTGTTGGCAGGGTGCTTTTTGAATATCGAATAA TTAGAAAGGAGTTGTTGCGT
Downstream 100 bases:
>100_bases TATCGTTTGTCGTGTCTTGTGTTTCGAGCATGAAGAGATTACTGAATCTGACTGGGTTGGGATCGTCGATATGGATTCAA TGACATATACTGAATGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAKQSLLQEMKKTFMLHAIAAHFSNGMIPVAVLYLLLTISTGDVFFERTVEHLIIIVLMAIPVSFFSGIYDWKKKYRGAK APVFMKKIRLSGILFVLCALTVGIRLSTPDVMTGTGILHWVYIVLLLGMLPIVTLLGHYGGKLASQGRQQQPKAS
Sequences:
>Translated_155_residues MAKQSLLQEMKKTFMLHAIAAHFSNGMIPVAVLYLLLTISTGDVFFERTVEHLIIIVLMAIPVSFFSGIYDWKKKYRGAK APVFMKKIRLSGILFVLCALTVGIRLSTPDVMTGTGILHWVYIVLLLGMLPIVTLLGHYGGKLASQGRQQQPKAS >Mature_154_residues AKQSLLQEMKKTFMLHAIAAHFSNGMIPVAVLYLLLTISTGDVFFERTVEHLIIIVLMAIPVSFFSGIYDWKKKYRGAKA PVFMKKIRLSGILFVLCALTVGIRLSTPDVMTGTGILHWVYIVLLLGMLPIVTLLGHYGGKLASQGRQQQPKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17191; Mature: 17060
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQSLLQEMKKTFMLHAIAAHFSNGMIPVAVLYLLLTISTGDVFFERTVEHLIIIVLMA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IPVSFFSGIYDWKKKYRGAKAPVFMKKIRLSGILFVLCALTVGIRLSTPDVMTGTGILHW HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VYIVLLLGMLPIVTLLGHYGGKLASQGRQQQPKAS HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC >Mature Secondary Structure AKQSLLQEMKKTFMLHAIAAHFSNGMIPVAVLYLLLTISTGDVFFERTVEHLIIIVLMA CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH IPVSFFSGIYDWKKKYRGAKAPVFMKKIRLSGILFVLCALTVGIRLSTPDVMTGTGILHW HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH VYIVLLLGMLPIVTLLGHYGGKLASQGRQQQPKAS HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA