Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357161

Identifier: 119357161

GI number: 119357161

Start: 1544216

End: 1544659

Strand: Reverse

Name: 119357161

Synonym: Cpha266_1350

Alternate gene names: NA

Gene position: 1544659-1544216 (Counterclockwise)

Preceding gene: 119357162

Following gene: 119357159

Centisome position: 49.29

GC content: 47.3

Gene sequence:

>444_bases
ATGCGAAGTGTTTCGTTTCTGATTGTTGTTTTGTTGCTGCATGGCAATCCGCTTCAGGCTGAGGAGTATCGGAATGTCGA
AGTGAAAAAGATTGTTACCTCGACAAAAGCGAGCAATGGGCAGCGTCTTTCTTATCTTCGTTCAAAACATCCGGAAGTTA
CCGTGCTTGTCGTTACCGTTCCGCCTGGGGGGTCTACCGGCTGGCACAAGCATCCCGTGCCTGTTTATGCATACATGCTG
GACGGAGAGCTTTCTGTTGAGATGAAAAATGGCAGCAAGTATAAGTTCAAAAAAGGTGATGCTATTCTTGAGGTGGTGAA
CACGTTCCATAATGGTTACAATTCAGGCCGTGTTCCTGCAAGCCTGGTTGTTTTTTATACCGGAGCGGTTGGAATTCCGA
ATGTTGTCAAGGAACATGCAGCAGAAACCCCGGCTTTGCCGTAA

Upstream 100 bases:

>100_bases
TCGGGGTGATTTGTGCTGATACGTTTTTTTGTTGTGGAGAAGAATTGATAATCTCAATGTGGTTGTTTTTTTTTCAACGT
TTAGAGAAACAGGGGGTGGA

Downstream 100 bases:

>100_bases
GTAATTATTCAGGAAGGCGACGGCCGCGAGTTGTATGAAAAGGAGGGGGGGAGCGAATTATGTGCTGCGTGTTCAGTCAG
GAACCGGGAATCGGGAATTT

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain-Containing Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTVPPGGSTGWHKHPVPVYAYML
DGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPASLVVFYTGAVGIPNVVKEHAAETPALP

Sequences:

>Translated_147_residues
MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTVPPGGSTGWHKHPVPVYAYML
DGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPASLVVFYTGAVGIPNVVKEHAAETPALP
>Mature_147_residues
MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTVPPGGSTGWHKHPVPVYAYML
DGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPASLVVFYTGAVGIPNVVKEHAAETPALP

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16071; Mature: 16071

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTV
CCHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEE
PPGGSTGWHKHPVPVYAYMLDGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPA
CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCCCE
SLVVFYTGAVGIPNVVKEHAAETPALP
EEEEEEECCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRSVSFLIVVLLLHGNPLQAEEYRNVEVKKIVTSTKASNGQRLSYLRSKHPEVTVLVVTV
CCHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEE
PPGGSTGWHKHPVPVYAYMLDGELSVEMKNGSKYKFKKGDAILEVVNTFHNGYNSGRVPA
CCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCCCE
SLVVFYTGAVGIPNVVKEHAAETPALP
EEEEEEECCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA