| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119357110
Identifier: 119357110
GI number: 119357110
Start: 1473567
End: 1475960
Strand: Reverse
Name: 119357110
Synonym: Cpha266_1298
Alternate gene names: NA
Gene position: 1475960-1473567 (Counterclockwise)
Preceding gene: 119357111
Following gene: 119357105
Centisome position: 47.1
GC content: 29.53
Gene sequence:
>2394_bases TTGCTTGATTTTTTATATAAATGGAGATTGATTATGAAAAAAATAATAAAGATGTTTTTTGGGAACAGTAATAAAAAAGA ATCGCATTTTATAAATAATAATATTAATCAAGATGATGAAATTCGTGTTGCCGATGCAATTGACTCATCAGATGCTGATT TTATAAAAAAAGTTCTTAATTGTGATAATGTGAATTATCAATTTAAATCGATGGGTACCCCATTGCTTTATGCTGCTAAT TACGGCAATTTCGAAATGGTTAAATTGTTGATTAGTAAAGGCGCAAATCCTAATATCAAATTCAAGGAAATGACCCCTTT AAGTAGAGCCGTAGAAAAAGGGTTTAAAAATATTGTAAAATTTCTTCTTGCAAATGGCGCTGATCCGAATATACGAGAAT ATAGAGGTCACCTTCCGCTTCATGCAGTGATTGCTGCAAGAGATCATTTGTATACAGTGGCAGATAAAATAGAACTTATA TCAGATTTTTGTTTAGCTAAAGCAGATATGAATGCAAAAGATATGGGGGGGGCAGCAATTCATTATGCGTATAGTTACGA TTTCAATATTACGCTGAGGTTAATAGAATGTGGGGCGAATATAAATATACAGGCGGATGAATATAGAGACAGCCCATTCC CTGCTGGATTTACTATACTGCATCTTTATGTGAGTTTTAGGAAGTATGTTAACGCGTTAGAATTAATTAAATTAGGTGCT AATATATTTATTAAGGATAATGGTAATCAATCGCCTTATGGTATTATTTGTTCAATTGTCGATGATTCTGAAGATTTTAA CAAGTTAAAGCTTTTGGTTCAAGAAATACAAGGTGCTGATCAAGATAAAGAGATTCATGTTATGACGTGTAACATGTATT CTGGTTGGTATAATTATTATAATTCATTATTAAGAAAGTCTGGTGTTATAGTTACTGAATTATCATTTATTTTTACAGAT CTTTTGTTGGAAAATACTGGTACTGGTAGTGTTGATTTTAATGATATTTCTGATGAAAGGCTTCTTCATTGGCGCCACAT ATTATCTGAAAAAAGCGGAAATATGAAAATAATGTTGTTTGTTGGAGATTTGTTTTTTCATAGAGAAAAATCATCTAAAT CTGATATTAATAATTATAGACATTGTGAATTATTTATAAATTTTTTAATATCAGAAATTAATCGTGATCGCGTTTTGCTT TTAGTTCAACCTGAATCTATAAAACATATTTCATCTCCACCGGCTTCAAAGTTAAACTTTCATTTTTTAGATGCCGATAA TCCAGATAAAACTTGGCAAAAAATATTGCAATTTGTCAATATAGATTATACAGATAATACTTTGCATGAATTGTCGATTA AAGAGAAGAAGTATGATATTTTTTTAAGTTATGTAAGTCAAGATGCTTTTTTGGTAAGGTTTATTGCTGAGCAACTAATG GCAAAAGGGCTAAGTGTATGGTTTGCTGAATATTCGGTTGAGTCATTTGAATTAAATTTCCAGGAAATAATTAATCAAGG TATTGCTCAGTCAAAAAAGATAATATGCTTTTCAAATAAAAGCTATAATCAATCTGAATATTGTCAAATTGAAGCTTATA TTAGCAGGAATATTATTTCCCCTGAAAATATACTTGAGATTGAGTTGGTTGAAAAAGATAGTTCTGTTGCTATCGATAGC ATTATTGGATCTAAGCATAAACGATTCTCTACCTCTTCAAGTGATGTTCGTTATATATTGGGTATGATTGCTGATTTTAT AGAAGAAATTCGTCATGAATTAATACCTTTTTACGAAGTAAAAATGAGTACTTTTATTTTCACATACAAAGATTTAAAAT TTGTTTTAAAAATACCAAATAATTGGATTGTTAAAGAAAATAATATTTATAAAAAAACAGATATTGGTATTGATAACACT GTGTGTGACTTTGGAGATGGCGATTTGTGCTGCCGTTTAACTGTTGGAGAAAGTGCACATCCAGCTAAAGTTCATCAAAT TTCTGATGAACGCGCATTTTTTCGTAGAGTAAACGCTGTATTCCTTGAATATAGAGCATCTAAGACTGATCAAGGGTATC TGGATATATTGGCAACACATCTTGTTTTTACTAATGATGATATAACTTTTGAAAAAAAAGCACATCCTGCCTTTACGTAT TTATATAGGTCTAAAAAAAATGTAAAATATCAATCGTTTTCTAATTTATTCAATCAGCCAATTATTTTAAGAAATACTTA TGACAGGTTATATAGTATTACTCTTGAAACAAAAAAATATGGATATCTTGAGTTTTGCTTTTATTTCGAAGTTATTCATG ATGATCTTACTCGTTTTCTTGAAAAAGCATATTTAATGGATAAAATCGTTAGTAGTCTCATAATTGTTAATTGA
Upstream 100 bases:
>100_bases TTCGATCGTGTAAATTCTAAATATTAAATATAGTAGGATAACATTCGGAAAACAAATTGGTATTAAAAGAATAATTATAA TACCTCATATTATTATAGTA
Downstream 100 bases:
>100_bases AGCCATAGTGAGCGTGAATGGATTCTTAGGATCTTCGCAGAATATTGTGGGAATAGTGTAATAAGGTGTTAGCTTACACA CAGTGAAGACTATGGCTGCT
Product: ankyrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MLDFLYKWRLIMKKIIKMFFGNSNKKESHFINNNINQDDEIRVADAIDSSDADFIKKVLNCDNVNYQFKSMGTPLLYAAN YGNFEMVKLLISKGANPNIKFKEMTPLSRAVEKGFKNIVKFLLANGADPNIREYRGHLPLHAVIAARDHLYTVADKIELI SDFCLAKADMNAKDMGGAAIHYAYSYDFNITLRLIECGANINIQADEYRDSPFPAGFTILHLYVSFRKYVNALELIKLGA NIFIKDNGNQSPYGIICSIVDDSEDFNKLKLLVQEIQGADQDKEIHVMTCNMYSGWYNYYNSLLRKSGVIVTELSFIFTD LLLENTGTGSVDFNDISDERLLHWRHILSEKSGNMKIMLFVGDLFFHREKSSKSDINNYRHCELFINFLISEINRDRVLL LVQPESIKHISSPPASKLNFHFLDADNPDKTWQKILQFVNIDYTDNTLHELSIKEKKYDIFLSYVSQDAFLVRFIAEQLM AKGLSVWFAEYSVESFELNFQEIINQGIAQSKKIICFSNKSYNQSEYCQIEAYISRNIISPENILEIELVEKDSSVAIDS IIGSKHKRFSTSSSDVRYILGMIADFIEEIRHELIPFYEVKMSTFIFTYKDLKFVLKIPNNWIVKENNIYKKTDIGIDNT VCDFGDGDLCCRLTVGESAHPAKVHQISDERAFFRRVNAVFLEYRASKTDQGYLDILATHLVFTNDDITFEKKAHPAFTY LYRSKKNVKYQSFSNLFNQPIILRNTYDRLYSITLETKKYGYLEFCFYFEVIHDDLTRFLEKAYLMDKIVSSLIIVN
Sequences:
>Translated_797_residues MLDFLYKWRLIMKKIIKMFFGNSNKKESHFINNNINQDDEIRVADAIDSSDADFIKKVLNCDNVNYQFKSMGTPLLYAAN YGNFEMVKLLISKGANPNIKFKEMTPLSRAVEKGFKNIVKFLLANGADPNIREYRGHLPLHAVIAARDHLYTVADKIELI SDFCLAKADMNAKDMGGAAIHYAYSYDFNITLRLIECGANINIQADEYRDSPFPAGFTILHLYVSFRKYVNALELIKLGA NIFIKDNGNQSPYGIICSIVDDSEDFNKLKLLVQEIQGADQDKEIHVMTCNMYSGWYNYYNSLLRKSGVIVTELSFIFTD LLLENTGTGSVDFNDISDERLLHWRHILSEKSGNMKIMLFVGDLFFHREKSSKSDINNYRHCELFINFLISEINRDRVLL LVQPESIKHISSPPASKLNFHFLDADNPDKTWQKILQFVNIDYTDNTLHELSIKEKKYDIFLSYVSQDAFLVRFIAEQLM AKGLSVWFAEYSVESFELNFQEIINQGIAQSKKIICFSNKSYNQSEYCQIEAYISRNIISPENILEIELVEKDSSVAIDS IIGSKHKRFSTSSSDVRYILGMIADFIEEIRHELIPFYEVKMSTFIFTYKDLKFVLKIPNNWIVKENNIYKKTDIGIDNT VCDFGDGDLCCRLTVGESAHPAKVHQISDERAFFRRVNAVFLEYRASKTDQGYLDILATHLVFTNDDITFEKKAHPAFTY LYRSKKNVKYQSFSNLFNQPIILRNTYDRLYSITLETKKYGYLEFCFYFEVIHDDLTRFLEKAYLMDKIVSSLIIVN >Mature_797_residues MLDFLYKWRLIMKKIIKMFFGNSNKKESHFINNNINQDDEIRVADAIDSSDADFIKKVLNCDNVNYQFKSMGTPLLYAAN YGNFEMVKLLISKGANPNIKFKEMTPLSRAVEKGFKNIVKFLLANGADPNIREYRGHLPLHAVIAARDHLYTVADKIELI SDFCLAKADMNAKDMGGAAIHYAYSYDFNITLRLIECGANINIQADEYRDSPFPAGFTILHLYVSFRKYVNALELIKLGA NIFIKDNGNQSPYGIICSIVDDSEDFNKLKLLVQEIQGADQDKEIHVMTCNMYSGWYNYYNSLLRKSGVIVTELSFIFTD LLLENTGTGSVDFNDISDERLLHWRHILSEKSGNMKIMLFVGDLFFHREKSSKSDINNYRHCELFINFLISEINRDRVLL LVQPESIKHISSPPASKLNFHFLDADNPDKTWQKILQFVNIDYTDNTLHELSIKEKKYDIFLSYVSQDAFLVRFIAEQLM AKGLSVWFAEYSVESFELNFQEIINQGIAQSKKIICFSNKSYNQSEYCQIEAYISRNIISPENILEIELVEKDSSVAIDS IIGSKHKRFSTSSSDVRYILGMIADFIEEIRHELIPFYEVKMSTFIFTYKDLKFVLKIPNNWIVKENNIYKKTDIGIDNT VCDFGDGDLCCRLTVGESAHPAKVHQISDERAFFRRVNAVFLEYRASKTDQGYLDILATHLVFTNDDITFEKKAHPAFTY LYRSKKNVKYQSFSNLFNQPIILRNTYDRLYSITLETKKYGYLEFCFYFEVIHDDLTRFLEKAYLMDKIVSSLIIVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI116875852, Length=209, Percent_Identity=32.0574162679426, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI215598574, Length=169, Percent_Identity=34.9112426035503, Blast_Score=71, Evalue=5e-12, Organism=Homo sapiens, GI70780357, Length=169, Percent_Identity=34.9112426035503, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI70780353, Length=169, Percent_Identity=34.9112426035503, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI70780355, Length=169, Percent_Identity=34.9112426035503, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI70780359, Length=169, Percent_Identity=34.9112426035503, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI68131557, Length=223, Percent_Identity=30.4932735426009, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71981389, Length=236, Percent_Identity=29.2372881355932, Blast_Score=77, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25145251, Length=236, Percent_Identity=29.2372881355932, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17542700, Length=236, Percent_Identity=29.2372881355932, Blast_Score=76, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71981414, Length=236, Percent_Identity=29.2372881355932, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71981411, Length=236, Percent_Identity=29.2372881355932, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 92260; Mature: 92260
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFLYKWRLIMKKIIKMFFGNSNKKESHFINNNINQDDEIRVADAIDSSDADFIKKVLN CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHC CDNVNYQFKSMGTPLLYAANYGNFEMVKLLISKGANPNIKFKEMTPLSRAVEKGFKNIVK CCCCCEEHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FLLANGADPNIREYRGHLPLHAVIAARDHLYTVADKIELISDFCLAKADMNAKDMGGAAI HHHHCCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE HYAYSYDFNITLRLIECGANINIQADEYRDSPFPAGFTILHLYVSFRKYVNALELIKLGA EEEEEECCEEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC NIFIKDNGNQSPYGIICSIVDDSEDFNKLKLLVQEIQGADQDKEIHVMTCNMYSGWYNYY EEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHH NSLLRKSGVIVTELSFIFTDLLLENTGTGSVDFNDISDERLLHWRHILSEKSGNMKIMLF HHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEE VGDLFFHREKSSKSDINNYRHCELFINFLISEINRDRVLLLVQPESIKHISSPPASKLNF EECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCCCCEE HFLDADNPDKTWQKILQFVNIDYTDNTLHELSIKEKKYDIFLSYVSQDAFLVRFIAEQLM EEECCCCCHHHHHHHHHHHCCCCCCCCHHHHEECHHHHEEEEEHHCCCHHHHHHHHHHHH AKGLSVWFAEYSVESFELNFQEIINQGIAQSKKIICFSNKSYNQSEYCQIEAYISRNIIS HCCHHEEEHHHCHHHEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEHHCCCCC PENILEIELVEKDSSVAIDSIIGSKHKRFSTSSSDVRYILGMIADFIEEIRHELIPFYEV CCCEEEEEEEECCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEE KMSTFIFTYKDLKFVLKIPNNWIVKENNIYKKTDIGIDNTVCDFGDGDLCCRLTVGESAH EEEHEEEEEECEEEEEECCCCEEEECCCEEEEECCCCCCCEEECCCCCEEEEEEECCCCC PAKVHQISDERAFFRRVNAVFLEYRASKTDQGYLDILATHLVFTNDDITFEKKAHPAFTY CCHHHHCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHEEECCCEEEECCCCCCEEE LYRSKKNVKYQSFSNLFNQPIILRNTYDRLYSITLETKKYGYLEFCFYFEVIHDDLTRFL EECCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH EKAYLMDKIVSSLIIVN HHHHHHHHHHHHHEECC >Mature Secondary Structure MLDFLYKWRLIMKKIIKMFFGNSNKKESHFINNNINQDDEIRVADAIDSSDADFIKKVLN CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHC CDNVNYQFKSMGTPLLYAANYGNFEMVKLLISKGANPNIKFKEMTPLSRAVEKGFKNIVK CCCCCEEHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FLLANGADPNIREYRGHLPLHAVIAARDHLYTVADKIELISDFCLAKADMNAKDMGGAAI HHHHCCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE HYAYSYDFNITLRLIECGANINIQADEYRDSPFPAGFTILHLYVSFRKYVNALELIKLGA EEEEEECCEEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC NIFIKDNGNQSPYGIICSIVDDSEDFNKLKLLVQEIQGADQDKEIHVMTCNMYSGWYNYY EEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHH NSLLRKSGVIVTELSFIFTDLLLENTGTGSVDFNDISDERLLHWRHILSEKSGNMKIMLF HHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCEEEEEE VGDLFFHREKSSKSDINNYRHCELFINFLISEINRDRVLLLVQPESIKHISSPPASKLNF EECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCCCCEE HFLDADNPDKTWQKILQFVNIDYTDNTLHELSIKEKKYDIFLSYVSQDAFLVRFIAEQLM EEECCCCCHHHHHHHHHHHCCCCCCCCHHHHEECHHHHEEEEEHHCCCHHHHHHHHHHHH AKGLSVWFAEYSVESFELNFQEIINQGIAQSKKIICFSNKSYNQSEYCQIEAYISRNIIS HCCHHEEEHHHCHHHEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEHHCCCCC PENILEIELVEKDSSVAIDSIIGSKHKRFSTSSSDVRYILGMIADFIEEIRHELIPFYEV CCCEEEEEEEECCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHEE KMSTFIFTYKDLKFVLKIPNNWIVKENNIYKKTDIGIDNTVCDFGDGDLCCRLTVGESAH EEEHEEEEEECEEEEEECCCCEEEECCCEEEEECCCCCCCEEECCCCCEEEEEEECCCCC PAKVHQISDERAFFRRVNAVFLEYRASKTDQGYLDILATHLVFTNDDITFEKKAHPAFTY CCHHHHCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHEEECCCEEEECCCCCCEEE LYRSKKNVKYQSFSNLFNQPIILRNTYDRLYSITLETKKYGYLEFCFYFEVIHDDLTRFL EECCCCCCCHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH EKAYLMDKIVSSLIIVN HHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA